RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Fdx1P46656 188 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Fam196bQ6GQV1 535 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Caps2Q8BUG5 550 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Krt79Q8VED5 531 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Ppil4Q9CXG3 492 aaKnown RBP14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Hic2Q9JLZ6 619 aaKnown RBP14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 ErmnQ5EBJ4 281 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Ndufb9Q9CQJ8 179 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Plekhg2Q6KAU7 1340 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Atp1a2Q6PIE5 1020 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Kdm1aQ6ZQ88 853 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Tmem59lQ7TNI2 337 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Rnf187Q8BFX1 236 aa14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Matr3Q8K310 846 aaKnown RBP14.91□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Sipa1l1Q8C0T5 1782 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Kcnb2A6H8H5 907 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Mtss1lQ6P9S0 715 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 SltmQ8CH25 1031 aaKnown RBP14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Lbhd1A0A087WPA0 259 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 NpcdF8VQB8 469 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 XpcP51612 930 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Tas2r124Q7M718 309 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Cul5Q9D5V5 780 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Tubb4aQ9D6F9 444 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Kiaa0232Q80U59 1396 aaKnown RBP14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Llgl2Q3TJ91 1027 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Dpp8Q80YA7 892 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Haus7Q8BKT8 364 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 4930548H24RikQ9D496 437 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Plagl1Q9JLQ4 704 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Pex3Q9QXY9 372 aa14.9□□□□□ -0.02
Pdgfra-205ENSMUST00000201711 Ccdc121E9Q6D3 323 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Epb41l2O70318 988 aaKnown RBP14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Pak1O88643 545 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Hmgb2P30681 210 aaKnown RBP14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cyp4x1Q6A152 507 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Usp49Q6P9L4 685 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ifi35Q9D8C4 286 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ugt1a6bK9J7B2 531 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Trap1aP19473 224 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cacnb3P54285 484 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ugt1a6Q64435 531 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ugt1a7cQ6ZQM8 531 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 NelfbQ8C4Y3 580 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Amhr2Q8K592 568 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Tfap4Q9JIZ5 338 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Carmil3Q3UFQ8 1375 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Specc1lQ2KN98 1118 aaKnown RBP14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Tmtc2Q56A06 836 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Kiaa0319Q5SZV5 1081 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 HlfQ8BW74 295 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Camta1A2A891 1682 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Snapc4Q8BP86 1333 aa14.89□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Spata18Q0P557 537 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ube3cQ80U95 1083 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Q8C6G1 249 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Trim59Q922Y2 403 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Pcdhb14Q6PB90 796 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ankk1Q8BZ25 745 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Alx1Q8C8B0 326 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cbx6Q9DBY5 414 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Abcb6Q9DC29 842 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Rnf123Q5XPI3 1314 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ankrd63A2ARS0 390 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 RubcnlQ3TD16 648 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Pnpla2Q8BJ56 486 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Mei4Q8BRM6 389 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Dnm3Q8BZ98 863 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Pcdha12Q91Y18 950 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Trmt112Q9DCG9 125 aa14.88□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Sh3bp1P55194 680 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Arl8aQ8VEH3 186 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Gm3409A0A0G2JE67 319 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Fam178bQ24JP3 464 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ppfibp1Q8C8U0 969 aaKnown RBP14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Sept14Q9DA97 430 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Slurp2P0DP59 97 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Nap1l2P51860 460 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Pim2Q62070 370 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ppp2r5bQ6PD28 497 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Asic3Q6X1Y6 530 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Apol10aQ8CCA5 318 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Cabp7Q91ZM8 215 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Luc7lQ9CYI4 371 aaKnown RBP14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Tacc2Q9JJG0 1149 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Gm5934D3Z4U6 212 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Gm10378F6XQQ1 160 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Abcb4P21440 1276 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Grin1P35438 938 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Nme8Q715T0 586 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Ccdc181Q80ZU5 509 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 MbipQ99LQ1 341 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Haus2Q9CQS9 234 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Calml3Q9D6P8 149 aa14.87□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Col20a1Q923P0 1320 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Parp2O88554 559 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Etnk1Q9D4V0 363 aa14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Pdcd6ipQ9WU78 869 aaKnown RBP14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Nup153E9Q3G8 1462 aaKnown RBP14.86□□□□□ -0.03
Pdgfra-205ENSMUST00000201711 Aox4Q3TYQ9 1336 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 57.4 ms