RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Abcb4P21440 1276 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Prune1Q8BIW1 454 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Cyp2j7A0A140T8U1 504 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Mfsd4b4J3QNS5 503 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Mmp8O70138 465 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Snrnp27Q8K194 155 aa18.11■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Krt19P19001 403 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 AdkP55264 361 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Anapc5Q8BTZ4 740 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Fam204aQ8C6C7 236 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Echdc1Q9D9V3 322 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Hddc2Q3SXD3 199 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Pdcd7Q9WTY1 482 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 ZfaP23607 742 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Znf76Q8BMU0 568 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lmod1Q8BVA4 595 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Q8BWG4 1187 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Abtb1Q99LJ2 478 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ell2Q3UKU1 639 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Klhl14Q69ZK5 630 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ino80bQ99PT3 375 aaKnown RBP18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Fgd6Q69ZL1 1399 aa18.1■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lrrc74aA0A1Y7VMD6 494 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Hnrnph2P70333 449 aaKnown RBP18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Tcp11Q01755 566 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ppp2r5eQ61151 467 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ncaph2Q8BSP2 607 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Dnajc17Q91WT4 303 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Dph5Q9CWQ0 281 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Maml3D4QGC2 1135 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Traf1P39428 409 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Gnat3Q3V3I2 354 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 ChukQ60680 745 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Vps37bQ8R0J7 285 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Uba5Q8VE47 403 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lmnb2P21619 596 aaKnown RBP18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Lonp1Q8CGK3 949 aaKnown RBP18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Tbx22Q8K402 517 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 LrgukQ9D5S7 820 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ppp1r3fQ9JIG4 799 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ankrd50F7BE84 1390 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Cc2d2aQ8CFW7 1633 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Tbc1d2B1AVH7 922 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Rgs22G3UYX5 1258 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Chmp6P0C0A3 200 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 PparaP23204 468 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Cd22P35329 862 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Trip13Q3UA06 432 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Foxd4Q60688 444 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Jade1Q6ZPI0 834 aaKnown RBP18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Stx12Q9ER00 274 aa18.09■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Nsd3Q6P2L6 1439 aa18.08■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Gm28360A0A087WR25 190 aa18.08■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Zmynd8A2A484 1235 aaKnown RBP18.08■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Olfm3P63056 478 aa18.08■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ankrd13cQ3UX43 541 aa18.08■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Atf3Q60765 181 aa18.08■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Nlrp4eQ66X19 978 aa18.08■□□□□ 0.49
Col17a1-202ENSMUST00000086923 Ier5O89113 308 aa18.08■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Atp8a1P70704 1164 aa18.08■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Kcnf1Q7TSH7 493 aa18.08■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Chmp2bQ8BJF9 213 aa18.08■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Arhgap5P97393 1501 aa18.08■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Epn1Q80VP1 575 aa18.08■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Frmd4bQ920B0 1035 aa18.08■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Spout1Q3UHX9 385 aaKnown RBP18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Kank4Q6P9J5 1016 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Ppm1fQ8CGA0 452 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Mrps22Q9CXW2 359 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Gna15P30678 374 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Dnm2P39054 870 aaKnown RBP18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Cyth2P63034 400 aaKnown RBP18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Git1Q68FF6 770 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Kif1bpQ6ZPU9 617 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 4930572O03RikQ8C5Y0 211 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Pym1Q8CHP5 203 aaKnown RBP18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Ttc4Q8R3H9 386 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Dach2Q925Q8 634 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 GmncQ3URY2 333 aa18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Tbl3Q8C4J7 801 aaKnown RBP18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Rbm5Q91YE7 815 aaKnown RBP18.07■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Nup62clA2AG10 272 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 FtoQ8BGW1 502 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 F13a1Q8BH61 732 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Wars2Q9CYK1 360 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Map3k1P53349 1493 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Ppil4Q9CXG3 492 aaKnown RBP18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Ppip5k1A2ARP1 1436 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Apol7bB1AQP7 369 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Nucks1Q80XU3 234 aaKnown RBP18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Zbtb41Q811F1 908 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Ccdc87Q8CDL9 855 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Znf287Q9EQB9 759 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Gm10488Q4KL05 212 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Gm14819Q62478 212 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Rbm12b2Q66JV4 834 aaKnown RBP18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Lsm14bQ8CGC4 385 aaKnown RBP18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Gimap7Q8R379 293 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 Mrc2Q64449 1479 aa18.06■□□□□ 0.48
Col17a1-202ENSMUST00000086923 NrkQ9R0G8 1455 aa18.06■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 11.5 ms