Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 Gm25239-201ENSMUST00000174915 86 ntBASIC36.7■■■■□ 3.47
Snrnp27Q8K194 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.15■■■■□ 3.06
Snrnp27Q8K194 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Snrnp27Q8K194 Gm24109-201ENSMUST00000175489 103 ntBASIC32.03■■■□□ 2.72
Snrnp27Q8K194 Gm15042-201ENSMUST00000120212 883 ntBASIC31.61■■■□□ 2.65
Snrnp27Q8K194 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Snrnp27Q8K194 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Snrnp27Q8K194 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Snrnp27Q8K194 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Snrnp27Q8K194 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Snrnp27Q8K194 Gm15045-201ENSMUST00000117359 883 ntBASIC30.83■■■□□ 2.53
Snrnp27Q8K194 Gm23366-201ENSMUST00000175022 89 ntBASIC30.63■■■□□ 2.49
Snrnp27Q8K194 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Snrnp27Q8K194 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Snrnp27Q8K194 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.02■■■□□ 2.4
Snrnp27Q8K194 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Snrnp27Q8K194 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.78■■■□□ 2.36
Snrnp27Q8K194 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Snrnp27Q8K194 Psd-208ENSMUST00000224556 2034 ntBASIC29.74■■■□□ 2.35
Snrnp27Q8K194 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.67■■■□□ 2.34
Snrnp27Q8K194 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Snrnp27Q8K194 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Snrnp27Q8K194 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Snrnp27Q8K194 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
Snrnp27Q8K194 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Snrnp27Q8K194 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.24■■■□□ 2.27
Snrnp27Q8K194 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Snrnp27Q8K194 Gm25238-201ENSMUST00000174914 89 ntBASIC29.13■■■□□ 2.25
Snrnp27Q8K194 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.18
Snrnp27Q8K194 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Snrnp27Q8K194 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Snrnp27Q8K194 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Snrnp27Q8K194 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Snrnp27Q8K194 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Snrnp27Q8K194 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Snrnp27Q8K194 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.27■■■□□ 2.12
Snrnp27Q8K194 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Snrnp27Q8K194 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Snrnp27Q8K194 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Snrnp27Q8K194 Gm25262-201ENSMUST00000174934 133 ntBASIC28.18■■■□□ 2.1
Snrnp27Q8K194 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.12■■■□□ 2.09
Snrnp27Q8K194 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Snrnp27Q8K194 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Snrnp27Q8K194 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.03■■■□□ 2.08
Snrnp27Q8K194 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Snrnp27Q8K194 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.92■■■□□ 2.06
Snrnp27Q8K194 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Snrnp27Q8K194 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Snrnp27Q8K194 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Snrnp27Q8K194 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Snrnp27Q8K194 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Snrnp27Q8K194 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.84■■■□□ 2.05
Snrnp27Q8K194 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Snrnp27Q8K194 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
Snrnp27Q8K194 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Snrnp27Q8K194 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Snrnp27Q8K194 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Snrnp27Q8K194 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Snrnp27Q8K194 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.69■■■□□ 2.02
Snrnp27Q8K194 Gm26115-201ENSMUST00000175605 87 ntBASIC27.69■■■□□ 2.02
Snrnp27Q8K194 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.69■■■□□ 2.02
Snrnp27Q8K194 Gm27325-201ENSMUST00000175467 74 ntBASIC27.65■■■□□ 2.02
Snrnp27Q8K194 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.61■■■□□ 2.01
Snrnp27Q8K194 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Snrnp27Q8K194 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Snrnp27Q8K194 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Snrnp27Q8K194 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Snrnp27Q8K194 Rab21-202ENSMUST00000218831 843 ntBASIC27.48■■□□□ 1.99
Snrnp27Q8K194 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.46■■□□□ 1.99
Snrnp27Q8K194 Gm8109-201ENSMUST00000194076 746 ntBASIC27.4■■□□□ 1.98
Snrnp27Q8K194 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Snrnp27Q8K194 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.36■■□□□ 1.97
Snrnp27Q8K194 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Snrnp27Q8K194 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
Snrnp27Q8K194 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.24■■□□□ 1.95
Snrnp27Q8K194 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Snrnp27Q8K194 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Snrnp27Q8K194 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Snrnp27Q8K194 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Snrnp27Q8K194 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Snrnp27Q8K194 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Snrnp27Q8K194 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Snrnp27Q8K194 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.02■■□□□ 1.92
Snrnp27Q8K194 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.01■■□□□ 1.91
Snrnp27Q8K194 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Snrnp27Q8K194 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.93■■□□□ 1.9
Snrnp27Q8K194 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
Snrnp27Q8K194 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.85■■□□□ 1.89
Snrnp27Q8K194 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Snrnp27Q8K194 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.82■■□□□ 1.88
Snrnp27Q8K194 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Snrnp27Q8K194 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Snrnp27Q8K194 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Snrnp27Q8K194 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Snrnp27Q8K194 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Snrnp27Q8K194 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Snrnp27Q8K194 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.67■■□□□ 1.86
Snrnp27Q8K194 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.64■■□□□ 1.85
Snrnp27Q8K194 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.61■■□□□ 1.85
Snrnp27Q8K194 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms