RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Cyp3a25O09158 503 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Anp32eP97822 260 aaKnown RBP20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Fchsd1Q6PFY1 688 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Nme8Q715T0 586 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Enox1Q8BHR2 643 aaKnown RBP20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Pcdha12Q91Y18 950 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Rbm5Q91YE7 815 aaKnown RBP20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Tnrc6cQ3UHC0 1690 aaKnown RBP20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Stag2O35638 1231 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 H2afxP27661 143 aaKnown RBP20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 PpardP35396 440 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Il17raQ60943 864 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Secisbp2lQ6A098 1086 aaKnown RBP20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Tekt3Q6X6Z7 490 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Atp1a4Q9WV27 1032 aa20.19■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Tiam2Q6ZPF3 1715 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Ankrd63A2ARS0 390 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Rad23bP54728 416 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Cep128Q8BI22 1102 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Abcd1P48410 736 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Ctr9Q62018 1173 aaKnown RBP20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Cnga2Q62398 664 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 QarsQ8BML9 775 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Gimap5Q8BWF2 308 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Tulp1Q9Z273 543 aa20.18■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Otud7bB2RUR8 840 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Sec23aQ01405 765 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Tpm4Q6IRU2 248 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Paf1Q8K2T8 535 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Slc14a2Q8R4T9 930 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 MlphQ91V27 590 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Gnat2P50149 354 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Smarcc1P97496 1104 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Sf3b2Q3UJB0 878 aaKnown RBP20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Txndc16Q7TN22 820 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Gpr108Q91WD0 569 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Bap1Q99PU7 728 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Gm5580A0A0N4SVP8 411 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Ccdc191J3QQ27 883 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Cdh15P33146 784 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Snd1Q78PY7 910 aaKnown RBP20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Tas2r124Q7M718 309 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Trim29Q8R2Q0 587 aa20.17■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Kcnh4A2A5F7 1018 aa20.16■□□□□ 0.82
Ptpra-201ENSMUST00000028769 4931408C20RikE9PWP9 1381 aa20.16■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Tuft1O08970 390 aa20.16■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Chp1P61022 195 aa20.16■□□□□ 0.82
Ptpra-201ENSMUST00000028769 HlfQ8BW74 295 aa20.16■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Uba5Q8VE47 403 aa20.16■□□□□ 0.82
Ptpra-201ENSMUST00000028769 A0A1L1SQF0 893 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Pth1rP41593 591 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Spata32Q8C5V0 334 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 MicalclQ9D5U9 680 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Lmbr1Q9JIT0 490 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Gpaa1Q9WTK3 621 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Slc39a2G3X943 309 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Mtfr1lQ9CWE0 289 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Myh7bA2AQP0 1941 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Traf1P39428 409 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Cct6aP80317 531 aaKnown RBP20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Ercc6lQ8BHK9 1240 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Vps53Q8CCB4 832 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Ulbp1Q8HWA3 334 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Slc51aQ8R000 340 aa20.15■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Cyp26c1B2RXA7 518 aa20.14■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Gm28042B7ZCM9 1014 aa20.14■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Gm5134E9QAB5 671 aa20.14■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Ankrd23Q812A3 306 aa20.14■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Kctd3Q8BFX3 815 aa20.14■□□□□ 0.82
Ptpra-201ENSMUST00000028769 NelfbQ8C4Y3 580 aa20.14■□□□□ 0.82
Ptpra-201ENSMUST00000028769 Zfand4D3Z3C6 739 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Evi5P97366 809 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Krt86P97861 486 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Znhit6Q3UFB2 460 aaKnown RBP20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Mars2Q499X9 586 aaKnown RBP20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Tbx2Q60707 711 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Zmynd15Q8C0R7 736 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Nat10Q8K224 1024 aaKnown RBP20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Gimap7Q8R379 293 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 MetP16056 1379 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Mxd3Q80US8 206 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Pramel6Q810Y9 485 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Zcchc17Q9ESX4 241 aaKnown RBP20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Sel1lQ9Z2G6 790 aa20.14■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Epb41l2O70318 988 aaKnown RBP20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Rad23aP54726 363 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Sval3Q76I99 144 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Anks1bQ8BIZ1 1259 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Stac3Q8BZ71 360 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Sox30Q8CGW4 782 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Mfap3Q922T2 349 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 EhhadhQ9DBM2 718 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 MthfslL7N466 203 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Nr5a1P33242 462 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Ptpn12P35831 775 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Fam43aQ8BUP8 424 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Srgap2Q91Z67 1071 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Prc1Q99K43 603 aaKnown RBP20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 LpxnQ99N69 386 aa20.13■□□□□ 0.81
Ptpra-201ENSMUST00000028769 Cxcl11Q9JHH5 100 aa20.13■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms