RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 WhrnQ80VW5 918 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Fam161bQ8CB59 589 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Phldb2Q8K1N2 1249 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Eaf2Q91ZD6 262 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Zbtb43Q9DAI4 467 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 ThegQ9JMB1 375 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Stat2Q9WVL2 923 aa19.08■□□□□ 0.64
Ctcf-201ENSMUST00000005841 PfasQ5SUR0 1337 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Hap1O35668 628 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Sdc2P43407 202 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 A1cfQ5YD48 595 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Znf653Q6YND2 615 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Clic6Q8BHB9 596 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Dbndd2Q9CRD4 158 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Kiaa1522A2A7S8 1013 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 ItpripQ3TNL8 555 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ice2Q3UZ18 988 aaKnown RBP19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Trim6Q8BGE7 488 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 NpcdF8VQB8 469 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Hnrnph2P70333 449 aaKnown RBP19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Pex1Q5BL07 1284 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cnnm4Q69ZF7 771 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Pabpc4Q6PHQ9 660 aaKnown RBP19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Hook2Q7TMK6 716 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Dnph1Q80VJ3 173 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cnpy3Q9DAU1 276 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cwc25Q9DBF7 416 aa19.07■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Nav1Q8CH77 1875 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Sdad1Q80UZ2 687 aaKnown RBP19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cep85Q8BMK0 761 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Gm5580A0A0N4SVP8 411 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Apol10aQ8CCA5 318 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Kcnj14Q8JZN3 434 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Saal1Q9D2C2 474 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Calr3Q9D9Q6 380 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cdhr2E9Q7P9 1308 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Gm21671G3UY31 267 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cyp4x1Q6A152 507 aa19.06■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ddr1Q03146 911 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cct5P80316 541 aaKnown RBP19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Mindy1Q76LS9 468 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Zic5Q7TQ40 622 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Prl7b1Q8CGZ9 251 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cplx1P63040 134 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 IntuQ059U7 942 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ccdc174Q3U155 467 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Srrm3Q80WV7 648 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Tob2Q9JM55 345 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Foxo3Q9WVH4 672 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Stk39Q9Z1W9 556 aa19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Uso1Q9Z1Z0 959 aaKnown RBP19.05■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Col18a1P39061 1774 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Gm42641I6L9G2 585 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Hnrnph1O35737 449 aaKnown RBP19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 AtripQ8BMG1 785 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ildr1Q8CBR1 537 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Mmgt1Q8K273 131 aaKnown RBP19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Paf1Q8K2T8 535 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ubxn6Q99PL6 442 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ccdc88aQ5SNZ0 1873 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Frmd7A2AD83 703 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ugt1a8D3Z748 530 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ugt1a10E9PXN7 530 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Eif5P59325 429 aaKnown RBP19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ift122Q6NWV3 1182 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Kndc1Q0KK55 1742 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Phldb3E9QAF4 648 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Slc12a2P55012 1205 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ano9P86044 747 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Caps2Q8BUG5 550 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Srgap2Q91Z67 1071 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Krt23Q99PS0 422 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Sil1Q9EPK6 465 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Copb1Q9JIF7 953 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Zfp646Q6NV66 1788 aa19.04■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Gm10471E9Q1C7 252 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ints5Q8CHT3 1018 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Spata4Q8K3V1 295 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Tpcn1Q9EQJ0 817 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Suclg2Q9Z2I8 433 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 CrklP47941 303 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Atp8a2P98200 1148 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Top1Q04750 767 aaKnown RBP19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Lrrd1Q8C0R9 853 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 LgsnQ8CIX8 563 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Tab2Q99K90 693 aa19.03■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Sec23aQ01405 765 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Cep112Q5PR68 954 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ddx3yQ62095 658 aaKnown RBP19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Drc7Q6V3W6 876 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Lrsam1Q80ZI6 727 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Anapc4Q91W96 807 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Sh2b2Q9JID9 621 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Egfl6Q9JJZ5 550 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Kdm3aQ6PCM1 1323 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Ftl2P49945 183 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Gabpb2P81069 414 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Chmp3Q9CQ10 224 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Fam213aQ9CYH2 218 aa19.02■□□□□ 0.64
Ctcf-201ENSMUST00000005841 Kif13bA0A286YCV9 1847 aa19.02■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 867.2 ms