RNA–Protein interactions for RNA: ENSMUST00000218686.1

Trappc6b-207, Transcript of Trafficking protein particle complex subunit 6B, mousemouse

TSL 3 BASIC

Gene Trappc6b, Length 785 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6b-207ENSMUST00000218686 Lce1kJ3QP15 125 aa8.3□□□□□ -1.08
Trappc6b-207ENSMUST00000218686 Ndufs5Q99LY9 106 aa8.28□□□□□ -1.08
Trappc6b-207ENSMUST00000218686 Sprr2iO70560 76 aa8.26□□□□□ -1.09
Trappc6b-207ENSMUST00000218686 Gm4553A0A1B0GSA9 284 aa8.25□□□□□ -1.09
Trappc6b-207ENSMUST00000218686 Gm12216A0A1W2P827 62 aa8.15□□□□□ -1.1
Trappc6b-207ENSMUST00000218686 Pcp4P63054 62 aa8.11□□□□□ -1.11
Trappc6b-207ENSMUST00000218686 Gm11568A2A4M2 211 aa8.08□□□□□ -1.12
Trappc6b-207ENSMUST00000218686 Krtap9-1Q64526 186 aa8.08□□□□□ -1.12
Trappc6b-207ENSMUST00000218686 Gm3646F6S692 53 aa8.07□□□□□ -1.12
Trappc6b-207ENSMUST00000218686 Gm2431E9Q8S1 172 aa8.06□□□□□ -1.12
Trappc6b-207ENSMUST00000218686 Romo1P60603 79 aa8.01□□□□□ -1.13
Trappc6b-207ENSMUST00000218686 Gm10337F7DEP7 55 aa7.91□□□□□ -1.14
Trappc6b-207ENSMUST00000218686 Syne1Q6ZWR6 8799 aa7.86□□□□□ -1.15
Trappc6b-207ENSMUST00000218686 Gm45337A0A1B0GS71 263 aa7.78□□□□□ -1.16
Trappc6b-207ENSMUST00000218686 Krtap7-1Q9D3I6 87 aa7.69□□□□□ -1.18
Trappc6b-207ENSMUST00000218686 Hmcn1D3YXG0 5634 aa7.69□□□□□ -1.18
Trappc6b-207ENSMUST00000218686 DstQ91ZU6 7393 aaKnown RBP7.68□□□□□ -1.18
Trappc6b-207ENSMUST00000218686 NebE9Q1W3 7152 aa7.67□□□□□ -1.18
Trappc6b-207ENSMUST00000218686 Lce3bQ9CQM7 98 aa7.65□□□□□ -1.18
Trappc6b-207ENSMUST00000218686 A0A1Y7VLE6 161 aa7.58□□□□□ -1.2
Trappc6b-207ENSMUST00000218686 Krtap28-13A0A087WQP5 138 aa7.56□□□□□ -1.2
Trappc6b-207ENSMUST00000218686 Gm39115A0A1B0GSH7 232 aa7.55□□□□□ -1.2
Trappc6b-207ENSMUST00000218686 Lce1fB9EJP6 147 aa7.55□□□□□ -1.2
Trappc6b-207ENSMUST00000218686 Lce1cQ9D1C5 147 aa7.55□□□□□ -1.2
Trappc6b-207ENSMUST00000218686 A030005K14RikA0A1Y7VNY1 122 aa7.5□□□□□ -1.21
Trappc6b-207ENSMUST00000218686 Krtap4-16Q91W93 202 aa7.48□□□□□ -1.21
Trappc6b-207ENSMUST00000218686 Gm40460A0A1B0GR10 244 aa7.46□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Gm7579A0A1B0GRJ4 243 aa7.46□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Krtap5-5Q2TA51 241 aa7.46□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Krtap5-4Q62220 223 aa7.46□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Krtap28-10A0A1Y7VP58 119 aa7.42□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Gm10153A0A1B0GRL1 320 aa7.41□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Gm10272F7CZ33 110 aa7.4□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Tnp1P10856 55 aa7.4□□□□□ -1.22
Trappc6b-207ENSMUST00000218686 Krtap19-4Q925H7 84 aa7.39□□□□□ -1.23
Trappc6b-207ENSMUST00000218686 Gm40193A0A1B0GT39 78 aa7.35□□□□□ -1.23
Trappc6b-207ENSMUST00000218686 Gm45618A0A1B0GSA0 219 aa7.22□□□□□ -1.25
Trappc6b-207ENSMUST00000218686 Krtap31-2Q8CAY5 177 aa7.13□□□□□ -1.27
Trappc6b-207ENSMUST00000218686 Sprr2fO70557 76 aa7.11□□□□□ -1.27
Trappc6b-207ENSMUST00000218686 Gm11938Q9D3H4 131 aa7.09□□□□□ -1.27
Trappc6b-207ENSMUST00000218686 Mt1P02802 61 aaKnown RBP7.08□□□□□ -1.28
Trappc6b-207ENSMUST00000218686 AhnakE9Q616 5656 aaKnown RBP7.03□□□□□ -1.28
Trappc6b-207ENSMUST00000218686 A030014E15RikA0A1Y7VJV2 120 aa6.97□□□□□ -1.29
Trappc6b-207ENSMUST00000218686 A0A1Y7VJ07 166 aa6.91□□□□□ -1.3
Trappc6b-207ENSMUST00000218686 Gm7544A0A1Y7VJ58 118 aa6.69□□□□□ -1.34
Trappc6b-207ENSMUST00000218686 Mp68P56379 58 aa6.65□□□□□ -1.34
Trappc6b-207ENSMUST00000218686 Mt3P28184 68 aa6.63□□□□□ -1.35
Trappc6b-207ENSMUST00000218686 Lce3cQ91V05 98 aa6.63□□□□□ -1.35
Trappc6b-207ENSMUST00000218686 Lce3dE9Q8V1 98 aa6.56□□□□□ -1.36
Trappc6b-207ENSMUST00000218686 SvipQ3UZP4 77 aa6.5□□□□□ -1.37
Trappc6b-207ENSMUST00000218686 Krtap31-1Q9D644 177 aa6.47□□□□□ -1.37
Trappc6b-207ENSMUST00000218686 Sprr2dO70555 85 aa6.42□□□□□ -1.38
Trappc6b-207ENSMUST00000218686 Lce3eF8VQJ0 98 aa6.39□□□□□ -1.39
Trappc6b-207ENSMUST00000218686 Lce3fQ6PAI4 98 aa6.39□□□□□ -1.39
Trappc6b-207ENSMUST00000218686 ObscnA2AAJ9 8891 aaKnown RBP6.37□□□□□ -1.39
Trappc6b-207ENSMUST00000218686 Gm10100J3QK64 120 aa6.22□□□□□ -1.41
Trappc6b-207ENSMUST00000218686 4933428G20RikQ9D3X4 101 aa6.19□□□□□ -1.42
Trappc6b-207ENSMUST00000218686 Gm20538F6Z9R1 75 aa6.18□□□□□ -1.42
Trappc6b-207ENSMUST00000218686 Lce3aQ497I5 98 aa6.12□□□□□ -1.43
Trappc6b-207ENSMUST00000218686 Sprr2eO70556 76 aa5.82□□□□□ -1.48
Trappc6b-207ENSMUST00000218686 Sprr2hO70559 108 aa5.7□□□□□ -1.5
Trappc6b-207ENSMUST00000218686 Gm10142J3KMP7 120 aa5.66□□□□□ -1.5
Trappc6b-207ENSMUST00000218686 Muc16A0A140LJ72 8478 aa5.62□□□□□ -1.51
Trappc6b-207ENSMUST00000218686 A0A286YCP9 139 aa5.59□□□□□ -1.51
Trappc6b-207ENSMUST00000218686 Gm10024A0A0A0MQA4 119 aa5.53□□□□□ -1.52
Trappc6b-207ENSMUST00000218686 Gm29735A0A1B0GT06 219 aa5.4□□□□□ -1.54
Trappc6b-207ENSMUST00000218686 A030003K21RikA0A1Y7VIM3 128 aa5.23□□□□□ -1.57
Trappc6b-207ENSMUST00000218686 Gm11567Q9D141 195 aa5.12□□□□□ -1.59
Trappc6b-207ENSMUST00000218686 Ndufaf8A2AMZ4 74 aa5.08□□□□□ -1.6
Trappc6b-207ENSMUST00000218686 Gm6217A0A1Y7VJK9 128 aa5.04□□□□□ -1.6
Trappc6b-207ENSMUST00000218686 1110025L11RikO09048 78 aa4.93□□□□□ -1.62
Trappc6b-207ENSMUST00000218686 Krtap6-5Q925H3 78 aa4.93□□□□□ -1.62
Trappc6b-207ENSMUST00000218686 Krtap5-1Q64507 230 aa4.61□□□□□ -1.67
Trappc6b-207ENSMUST00000218686 Gm10229O08631 77 aa4.41□□□□□ -1.7
Trappc6b-207ENSMUST00000218686 Sprr2bO70554 98 aa4.41□□□□□ -1.7
Trappc6b-207ENSMUST00000218686 Krtap6-2O08884 159 aa4.07□□□□□ -1.76
Trappc6b-207ENSMUST00000218686 Krtap21-1Q925H4 128 aa3.99□□□□□ -1.77
Trappc6b-207ENSMUST00000218686 Gm9112A2AI92 75 aa3.85□□□□□ -1.79
Trappc6b-207ENSMUST00000218686 Phgr1Q8K0G7 91 aa3.31□□□□□ -1.88
Trappc6b-207ENSMUST00000218686 Gm4559A4IF42 199 aa3.17□□□□□ -1.9
Retrieved 80 of 22,080 RNA–protein pairs in 13.2 ms