RNA–Protein interactions for RNA: ENSMUST00000215718.1

Scn11a-202, Transcript of Sodium channel protein type 11 subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn11a, Length 5,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11a-202ENSMUST00000215718 Krtap4-1Q3UUY3 169 aa2.24□□□□□ -2.05
Scn11a-202ENSMUST00000215718 Birc6O88738 4882 aa2.23□□□□□ -2.05
Scn11a-202ENSMUST00000215718 2300003K06RikA2A4M0 262 aa2.22□□□□□ -2.05
Scn11a-202ENSMUST00000215718 Lce1kJ3QP15 125 aa2.22□□□□□ -2.05
Scn11a-202ENSMUST00000215718 Krtap4-7Q9D732 168 aa2.2□□□□□ -2.06
Scn11a-202ENSMUST00000215718 Ubr4A2AN08 5180 aa2.19□□□□□ -2.06
Scn11a-202ENSMUST00000215718 Lce1a1Q9CQH5 143 aa2.16□□□□□ -2.06
Scn11a-202ENSMUST00000215718 Krtap4-9B1AQA9 244 aa2.15□□□□□ -2.06
Scn11a-202ENSMUST00000215718 Gm11564A2A4L9 201 aa2.15□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Gm11563B1AQ90 168 aa2.15□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Gm11595B1AQA7 289 aa2.15□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Krtap4-8B1AQA8 209 aa2.15□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Mt1P02802 61 aaKnown RBP2.14□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Abca13Q5SSE9 5034 aa2.13□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Hmcn2A2AJ76 5100 aa2.13□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Gm11596B1AQB0 205 aa2.13□□□□□ -2.07
Scn11a-202ENSMUST00000215718 ObscnA2AAJ9 8891 aaKnown RBP2.12□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Sprr2bO70554 98 aa2.11□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Krtap17-1A2A5X6 109 aa2.11□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Krtap4-13Q9D7P3 165 aa2.1□□□□□ -2.07
Scn11a-202ENSMUST00000215718 Gm11555B1AQ89 175 aa2.09□□□□□ -2.08
Scn11a-202ENSMUST00000215718 Muc5bE9Q5I3 4800 aa2.08□□□□□ -2.08
Scn11a-202ENSMUST00000215718 4932415D10RikA0A1W2P6U8 4986 aa2.06□□□□□ -2.08
Scn11a-202ENSMUST00000215718 Fsip2A2ARZ3 6995 aa2.05□□□□□ -2.08
Scn11a-202ENSMUST00000215718 A0A1Y7VLE6 161 aa2.05□□□□□ -2.08
Scn11a-202ENSMUST00000215718 Fat4Q2PZL6 4981 aa2.05□□□□□ -2.08
Scn11a-202ENSMUST00000215718 Muc16A0A140LJ72 8478 aa2.04□□□□□ -2.08
Scn11a-202ENSMUST00000215718 ZanO88799 5376 aa2.01□□□□□ -2.09
Scn11a-202ENSMUST00000215718 Syne2Q6ZWQ0 6874 aaKnown RBP2.01□□□□□ -2.09
Scn11a-202ENSMUST00000215718 Rnf213E9Q555 5152 aaKnown RBP1.97□□□□□ -2.09
Scn11a-202ENSMUST00000215718 Gm11554B1AQB2 190 aa1.93□□□□□ -2.1
Scn11a-202ENSMUST00000215718 Krtap6-3A0A087WQL6 57 aa1.93□□□□□ -2.1
Scn11a-202ENSMUST00000215718 Gm7544A0A1Y7VJ58 118 aa1.92□□□□□ -2.1
Scn11a-202ENSMUST00000215718 A030003K21RikA0A1Y7VIM3 128 aa1.91□□□□□ -2.1
Scn11a-202ENSMUST00000215718 A0A1Y7VJH8 109 aa1.86□□□□□ -2.11
Scn11a-202ENSMUST00000215718 SspoQ8CG65 4998 aa1.85□□□□□ -2.11
Scn11a-202ENSMUST00000215718 Krtap28-10A0A1Y7VP58 119 aa1.84□□□□□ -2.11
Scn11a-202ENSMUST00000215718 Krtap20-2E9Q0A8 60 aa1.84□□□□□ -2.12
Scn11a-202ENSMUST00000215718 Ush2AQ2QI47 5193 aa1.82□□□□□ -2.12
Scn11a-202ENSMUST00000215718 A030005L19RikA0A1Y7VIU2 113 aa1.79□□□□□ -2.12
Scn11a-202ENSMUST00000215718 Kmt2dQ6PDK2 5588 aa1.79□□□□□ -2.12
Scn11a-202ENSMUST00000215718 Gm6217A0A1Y7VJK9 128 aa1.77□□□□□ -2.13
Scn11a-202ENSMUST00000215718 Eppk1Q8R0W0 6548 aa1.77□□□□□ -2.13
Scn11a-202ENSMUST00000215718 A0A286YCP9 139 aa1.74□□□□□ -2.13
Scn11a-202ENSMUST00000215718 1110025L11RikO09048 78 aa1.73□□□□□ -2.13
Scn11a-202ENSMUST00000215718 Krtap6-5Q925H3 78 aa1.73□□□□□ -2.13
Scn11a-202ENSMUST00000215718 Gm11559Q9D3H7 191 aa1.73□□□□□ -2.13
Scn11a-202ENSMUST00000215718 A030005K14RikA0A1Y7VNY1 122 aa1.71□□□□□ -2.14
Scn11a-202ENSMUST00000215718 Macf1Q9QXZ0 7354 aaKnown RBP1.7□□□□□ -2.14
Scn11a-202ENSMUST00000215718 DstQ91ZU6 7393 aaKnown RBP1.69□□□□□ -2.14
Scn11a-202ENSMUST00000215718 A0A1Y7VJ07 166 aa1.67□□□□□ -2.14
Scn11a-202ENSMUST00000215718 Gm10229O08631 77 aa1.65□□□□□ -2.15
Scn11a-202ENSMUST00000215718 Krtap28-13A0A087WQP5 138 aa1.64□□□□□ -2.15
Scn11a-202ENSMUST00000215718 NebE9Q1W3 7152 aa1.63□□□□□ -2.15
Scn11a-202ENSMUST00000215718 Phgr1Q8K0G7 91 aa1.62□□□□□ -2.15
Scn11a-202ENSMUST00000215718 Gm11568A2A4M2 211 aa1.56□□□□□ -2.16
Scn11a-202ENSMUST00000215718 Krtap9-1Q64526 186 aa1.5□□□□□ -2.17
Scn11a-202ENSMUST00000215718 Muc19Q6PZE0 7524 aa1.49□□□□□ -2.17
Scn11a-202ENSMUST00000215718 Gm11567Q9D141 195 aa1.48□□□□□ -2.17
Scn11a-202ENSMUST00000215718 Gm11639A0A1D5RLM8 5808 aa1.48□□□□□ -2.17
Scn11a-202ENSMUST00000215718 A030014E15RikA0A1Y7VJV2 120 aa1.47□□□□□ -2.17
Scn11a-202ENSMUST00000215718 Gpr98Q8VHN7 6298 aaKnown RBP1.38□□□□□ -2.19
Scn11a-202ENSMUST00000215718 Hmcn1D3YXG0 5634 aa1.31□□□□□ -2.2
Scn11a-202ENSMUST00000215718 Krtap6-2O08884 159 aa1.3□□□□□ -2.2
Scn11a-202ENSMUST00000215718 Krtap21-1Q925H4 128 aa1.18□□□□□ -2.22
Scn11a-202ENSMUST00000215718 Krtap5-2Q9D5Z7 189 aa1.18□□□□□ -2.22
Scn11a-202ENSMUST00000215718 Gm4553A0A1B0GSA9 284 aa1.1□□□□□ -2.23
Scn11a-202ENSMUST00000215718 AhnakE9Q616 5656 aaKnown RBP1.07□□□□□ -2.24
Scn11a-202ENSMUST00000215718 Gm2431E9Q8S1 172 aa1.07□□□□□ -2.24
Scn11a-202ENSMUST00000215718 Gm10153A0A1B0GRL1 320 aa1□□□□□ -2.25
Scn11a-202ENSMUST00000215718 Gm45337A0A1B0GS71 263 aa1□□□□□ -2.25
Scn11a-202ENSMUST00000215718 Gm40460A0A1B0GR10 244 aa0.99□□□□□ -2.25
Scn11a-202ENSMUST00000215718 Gm7579A0A1B0GRJ4 243 aa0.99□□□□□ -2.25
Scn11a-202ENSMUST00000215718 Krtap5-5Q2TA51 241 aa0.99□□□□□ -2.25
Scn11a-202ENSMUST00000215718 Krtap5-4Q62220 223 aa0.99□□□□□ -2.25
Scn11a-202ENSMUST00000215718 Gm39115A0A1B0GSH7 232 aa0.98□□□□□ -2.25
Scn11a-202ENSMUST00000215718 Gm45618A0A1B0GSA0 219 aa0.92□□□□□ -2.26
Scn11a-202ENSMUST00000215718 Gm29735A0A1B0GT06 219 aa0.83□□□□□ -2.28
Scn11a-202ENSMUST00000215718 Krtap5-1Q64507 230 aa0.68□□□□□ -2.3
Scn11a-202ENSMUST00000215718 Gm4559A4IF42 199 aa0.64□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 101.2 ms