RNA–Protein interactions for RNA: ENSMUST00000199571.4

Csde1-216, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Csde1, Length 3,123 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-216ENSMUST00000199571 Krtap9-3Q3V2C1 136 aa3.26□□□□□ -1.89
Csde1-216ENSMUST00000199571 Gm10100J3QK64 120 aa3.25□□□□□ -1.89
Csde1-216ENSMUST00000199571 Krtap4-13Q9D7P3 165 aa3.25□□□□□ -1.89
Csde1-216ENSMUST00000199571 Lce1kJ3QP15 125 aa3.24□□□□□ -1.89
Csde1-216ENSMUST00000199571 Krtap12-1Q9Z287 130 aa3.22□□□□□ -1.89
Csde1-216ENSMUST00000199571 Krtap19-9aF8WH65 55 aa3.18□□□□□ -1.9
Csde1-216ENSMUST00000199571 Sprr2kO70562 68 aa3.17□□□□□ -1.9
Csde1-216ENSMUST00000199571 Krtap9-5A2A5X3 358 aa3.15□□□□□ -1.91
Csde1-216ENSMUST00000199571 Lce1cQ9D1C5 147 aa3.15□□□□□ -1.91
Csde1-216ENSMUST00000199571 Lce1a2Q9D1K4 149 aa3.14□□□□□ -1.91
Csde1-216ENSMUST00000199571 Lce1iQ9D6P5 149 aa3.14□□□□□ -1.91
Csde1-216ENSMUST00000199571 Lce1fB9EJP6 147 aa3.12□□□□□ -1.91
Csde1-216ENSMUST00000199571 Krtap19-2Q925I0 141 aa3.11□□□□□ -1.91
Csde1-216ENSMUST00000199571 Eppk1Q8R0W0 6548 aa3.08□□□□□ -1.92
Csde1-216ENSMUST00000199571 Krtap8-1O08633 61 aa3.07□□□□□ -1.92
Csde1-216ENSMUST00000199571 Krtap20-2E9Q0A8 60 aa3.06□□□□□ -1.92
Csde1-216ENSMUST00000199571 Krtap19-9bQ99NG9 58 aa3.06□□□□□ -1.92
Csde1-216ENSMUST00000199571 2310046K23RikA0A0A6YVW6 87 aa3.06□□□□□ -1.92
Csde1-216ENSMUST00000199571 2300003K06RikA2A4M0 262 aa3.05□□□□□ -1.92
Csde1-216ENSMUST00000199571 Gm6358A0A087WPH4 74 aa3.04□□□□□ -1.92
Csde1-216ENSMUST00000199571 Sprr2gO70558 76 aa2.99□□□□□ -1.93
Csde1-216ENSMUST00000199571 Gm11567Q9D141 195 aa2.98□□□□□ -1.93
Csde1-216ENSMUST00000199571 Gm2431E9Q8S1 172 aa2.97□□□□□ -1.93
Csde1-216ENSMUST00000199571 Gm11554B1AQB2 190 aa2.92□□□□□ -1.94
Csde1-216ENSMUST00000199571 Syne1Q6ZWR6 8799 aa2.91□□□□□ -1.94
Csde1-216ENSMUST00000199571 Gm11639A0A1D5RLM8 5808 aa2.9□□□□□ -1.94
Csde1-216ENSMUST00000199571 Gm39115A0A1B0GSH7 232 aa2.89□□□□□ -1.95
Csde1-216ENSMUST00000199571 Gm10272F7CZ33 110 aa2.87□□□□□ -1.95
Csde1-216ENSMUST00000199571 Mt2P02798 61 aa2.87□□□□□ -1.95
Csde1-216ENSMUST00000199571 Gm45618A0A1B0GSA0 219 aa2.86□□□□□ -1.95
Csde1-216ENSMUST00000199571 Gpr98Q8VHN7 6298 aaKnown RBP2.84□□□□□ -1.95
Csde1-216ENSMUST00000199571 Gm11938Q9D3H4 131 aa2.82□□□□□ -1.96
Csde1-216ENSMUST00000199571 4933428G20RikQ9D3X4 101 aa2.81□□□□□ -1.96
Csde1-216ENSMUST00000199571 Gm29735A0A1B0GT06 219 aa2.79□□□□□ -1.96
Csde1-216ENSMUST00000199571 Muc16A0A140LJ72 8478 aa2.78□□□□□ -1.96
Csde1-216ENSMUST00000199571 Macf1Q9QXZ0 7354 aaKnown RBP2.75□□□□□ -1.97
Csde1-216ENSMUST00000199571 Gm10142J3KMP7 120 aa2.69□□□□□ -1.98
Csde1-216ENSMUST00000199571 Lce3bQ9CQM7 98 aa2.68□□□□□ -1.98
Csde1-216ENSMUST00000199571 Krtap22-2J3QNX6 67 aa2.68□□□□□ -1.98
Csde1-216ENSMUST00000199571 Kmt2dQ6PDK2 5588 aa2.66□□□□□ -1.98
Csde1-216ENSMUST00000199571 Sprr2dO70555 85 aa2.63□□□□□ -1.99
Csde1-216ENSMUST00000199571 Muc19Q6PZE0 7524 aa2.63□□□□□ -1.99
Csde1-216ENSMUST00000199571 Lce3cQ91V05 98 aa2.62□□□□□ -1.99
Csde1-216ENSMUST00000199571 Krtap5-2Q9D5Z7 189 aa2.59□□□□□ -1.99
Csde1-216ENSMUST00000199571 Lce3dE9Q8V1 98 aa2.59□□□□□ -2
Csde1-216ENSMUST00000199571 Krtap4-16Q91W93 202 aa2.56□□□□□ -2
Csde1-216ENSMUST00000199571 Gm4553A0A1B0GSA9 284 aa2.55□□□□□ -2
Csde1-216ENSMUST00000199571 Gm10153A0A1B0GRL1 320 aa2.54□□□□□ -2
Csde1-216ENSMUST00000199571 ObscnA2AAJ9 8891 aaKnown RBP2.53□□□□□ -2
Csde1-216ENSMUST00000199571 Sprr2iO70560 76 aa2.51□□□□□ -2.01
Csde1-216ENSMUST00000199571 Lce3eF8VQJ0 98 aa2.5□□□□□ -2.01
Csde1-216ENSMUST00000199571 Lce3fQ6PAI4 98 aa2.5□□□□□ -2.01
Csde1-216ENSMUST00000199571 DstQ91ZU6 7393 aaKnown RBP2.48□□□□□ -2.01
Csde1-216ENSMUST00000199571 Mt3P28184 68 aa2.48□□□□□ -2.01
Csde1-216ENSMUST00000199571 Lce3aQ497I5 98 aa2.47□□□□□ -2.01
Csde1-216ENSMUST00000199571 NebE9Q1W3 7152 aa2.45□□□□□ -2.02
Csde1-216ENSMUST00000199571 Krtap19-4Q925H7 84 aa2.44□□□□□ -2.02
Csde1-216ENSMUST00000199571 Sprr2hO70559 108 aa2.42□□□□□ -2.02
Csde1-216ENSMUST00000199571 Gm11568A2A4M2 211 aa2.41□□□□□ -2.02
Csde1-216ENSMUST00000199571 Krtap9-1Q64526 186 aa2.41□□□□□ -2.02
Csde1-216ENSMUST00000199571 Hmcn1D3YXG0 5634 aa2.4□□□□□ -2.02
Csde1-216ENSMUST00000199571 Krtap5-4Q62220 223 aa2.38□□□□□ -2.03
Csde1-216ENSMUST00000199571 Gm45337A0A1B0GS71 263 aa2.37□□□□□ -2.03
Csde1-216ENSMUST00000199571 Sprr2fO70557 76 aa2.35□□□□□ -2.03
Csde1-216ENSMUST00000199571 Sprr2eO70556 76 aa2.3□□□□□ -2.04
Csde1-216ENSMUST00000199571 Gm40460A0A1B0GR10 244 aa2.26□□□□□ -2.05
Csde1-216ENSMUST00000199571 Gm7579A0A1B0GRJ4 243 aa2.26□□□□□ -2.05
Csde1-216ENSMUST00000199571 Krtap5-5Q2TA51 241 aa2.26□□□□□ -2.05
Csde1-216ENSMUST00000199571 AhnakE9Q616 5656 aaKnown RBP2.24□□□□□ -2.05
Csde1-216ENSMUST00000199571 Gm10024A0A0A0MQA4 119 aa2.13□□□□□ -2.07
Csde1-216ENSMUST00000199571 Mt1P02802 61 aaKnown RBP2.08□□□□□ -2.08
Csde1-216ENSMUST00000199571 Krtap5-1Q64507 230 aa1.95□□□□□ -2.1
Csde1-216ENSMUST00000199571 Gm4559A4IF42 199 aa1.87□□□□□ -2.11
Csde1-216ENSMUST00000199571 1110025L11RikO09048 78 aa1.62□□□□□ -2.15
Csde1-216ENSMUST00000199571 Krtap6-5Q925H3 78 aa1.62□□□□□ -2.15
Csde1-216ENSMUST00000199571 Sprr2bO70554 98 aa1.53□□□□□ -2.16
Csde1-216ENSMUST00000199571 Phgr1Q8K0G7 91 aa1.52□□□□□ -2.17
Csde1-216ENSMUST00000199571 Gm10229O08631 77 aa1.44□□□□□ -2.18
Csde1-216ENSMUST00000199571 Krtap21-1Q925H4 128 aa1.32□□□□□ -2.2
Csde1-216ENSMUST00000199571 Krtap6-2O08884 159 aa1.23□□□□□ -2.21
Retrieved 80 of 22,080 RNA–protein pairs in 98.7 ms