RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Krtap31-1Q9D644 177 aa4.59□□□□□ -1.67
Pcdha9-201ENSMUST00000115659 Gm11564A2A4L9 201 aa4.56□□□□□ -1.68
Pcdha9-201ENSMUST00000115659 Gm11563B1AQ90 168 aa4.56□□□□□ -1.68
Pcdha9-201ENSMUST00000115659 Gm11595B1AQA7 289 aa4.56□□□□□ -1.68
Pcdha9-201ENSMUST00000115659 Krtap4-8B1AQA8 209 aa4.56□□□□□ -1.68
Pcdha9-201ENSMUST00000115659 Fat4Q2PZL6 4981 aa4.56□□□□□ -1.68
Pcdha9-201ENSMUST00000115659 Gm11562A0PK51 136 aa4.55□□□□□ -1.68
Pcdha9-201ENSMUST00000115659 ZanO88799 5376 aa4.54□□□□□ -1.68
Pcdha9-201ENSMUST00000115659 Abca13Q5SSE9 5034 aa4.5□□□□□ -1.69
Pcdha9-201ENSMUST00000115659 Hmcn2A2AJ76 5100 aa4.5□□□□□ -1.69
Pcdha9-201ENSMUST00000115659 Krtap4-9B1AQA9 244 aa4.48□□□□□ -1.69
Pcdha9-201ENSMUST00000115659 A0A1Y7VLE6 161 aa4.47□□□□□ -1.69
Pcdha9-201ENSMUST00000115659 2300003K06RikA2A4M0 262 aa4.44□□□□□ -1.7
Pcdha9-201ENSMUST00000115659 Muc5bE9Q5I3 4800 aa4.44□□□□□ -1.7
Pcdha9-201ENSMUST00000115659 Krtap4-7Q9D732 168 aa4.43□□□□□ -1.7
Pcdha9-201ENSMUST00000115659 Krtap17-1A2A5X6 109 aa4.35□□□□□ -1.71
Pcdha9-201ENSMUST00000115659 Krtap4-13Q9D7P3 165 aa4.34□□□□□ -1.71
Pcdha9-201ENSMUST00000115659 Syne2Q6ZWQ0 6874 aaKnown RBP4.33□□□□□ -1.72
Pcdha9-201ENSMUST00000115659 Rnf213E9Q555 5152 aaKnown RBP4.31□□□□□ -1.72
Pcdha9-201ENSMUST00000115659 Krtap6-3A0A087WQL6 57 aa4.3□□□□□ -1.72
Pcdha9-201ENSMUST00000115659 Mt3P28184 68 aa4.29□□□□□ -1.72
Pcdha9-201ENSMUST00000115659 Lce1kJ3QP15 125 aa4.27□□□□□ -1.73
Pcdha9-201ENSMUST00000115659 Lce1a1Q9CQH5 143 aa4.16□□□□□ -1.74
Pcdha9-201ENSMUST00000115659 Ush2AQ2QI47 5193 aa4.14□□□□□ -1.75
Pcdha9-201ENSMUST00000115659 Krtap4-16Q91W93 202 aa4.13□□□□□ -1.75
Pcdha9-201ENSMUST00000115659 Mt1P02802 61 aaKnown RBP4.11□□□□□ -1.75
Pcdha9-201ENSMUST00000115659 A030003K21RikA0A1Y7VIM3 128 aa4.1□□□□□ -1.75
Pcdha9-201ENSMUST00000115659 SspoQ8CG65 4998 aa4.07□□□□□ -1.76
Pcdha9-201ENSMUST00000115659 Eppk1Q8R0W0 6548 aa3.99□□□□□ -1.77
Pcdha9-201ENSMUST00000115659 Fsip2A2ARZ3 6995 aa3.99□□□□□ -1.77
Pcdha9-201ENSMUST00000115659 ObscnA2AAJ9 8891 aaKnown RBP3.89□□□□□ -1.79
Pcdha9-201ENSMUST00000115659 Gm11554B1AQB2 190 aa3.87□□□□□ -1.79
Pcdha9-201ENSMUST00000115659 Gm6217A0A1Y7VJK9 128 aa3.84□□□□□ -1.8
Pcdha9-201ENSMUST00000115659 Sprr2bO70554 98 aa3.83□□□□□ -1.8
Pcdha9-201ENSMUST00000115659 Muc16A0A140LJ72 8478 aa3.82□□□□□ -1.8
Pcdha9-201ENSMUST00000115659 A0A1Y7VJH8 109 aa3.8□□□□□ -1.8
Pcdha9-201ENSMUST00000115659 Krtap28-10A0A1Y7VP58 119 aa3.74□□□□□ -1.81
Pcdha9-201ENSMUST00000115659 Krtap20-2E9Q0A8 60 aa3.73□□□□□ -1.81
Pcdha9-201ENSMUST00000115659 Gm11555B1AQ89 175 aa3.66□□□□□ -1.82
Pcdha9-201ENSMUST00000115659 Krtap31-2Q8CAY5 177 aa3.63□□□□□ -1.83
Pcdha9-201ENSMUST00000115659 Krtap28-13A0A087WQP5 138 aa3.59□□□□□ -1.83
Pcdha9-201ENSMUST00000115659 Gm7544A0A1Y7VJ58 118 aa3.54□□□□□ -1.84
Pcdha9-201ENSMUST00000115659 A0A1Y7VJ07 166 aa3.53□□□□□ -1.84
Pcdha9-201ENSMUST00000115659 A030005K14RikA0A1Y7VNY1 122 aa3.52□□□□□ -1.85
Pcdha9-201ENSMUST00000115659 A030005L19RikA0A1Y7VIU2 113 aa3.48□□□□□ -1.85
Pcdha9-201ENSMUST00000115659 Kmt2dQ6PDK2 5588 aa3.44□□□□□ -1.86
Pcdha9-201ENSMUST00000115659 1110025L11RikO09048 78 aa3.31□□□□□ -1.88
Pcdha9-201ENSMUST00000115659 Krtap6-5Q925H3 78 aa3.31□□□□□ -1.88
Pcdha9-201ENSMUST00000115659 DstQ91ZU6 7393 aaKnown RBP3.29□□□□□ -1.88
Pcdha9-201ENSMUST00000115659 Macf1Q9QXZ0 7354 aaKnown RBP3.29□□□□□ -1.88
Pcdha9-201ENSMUST00000115659 NebE9Q1W3 7152 aa3.23□□□□□ -1.89
Pcdha9-201ENSMUST00000115659 Gm11559Q9D3H7 191 aa3.18□□□□□ -1.9
Pcdha9-201ENSMUST00000115659 A030014E15RikA0A1Y7VJV2 120 aa3.16□□□□□ -1.9
Pcdha9-201ENSMUST00000115659 Gm10229O08631 77 aa3.11□□□□□ -1.91
Pcdha9-201ENSMUST00000115659 Gpr98Q8VHN7 6298 aaKnown RBP3.08□□□□□ -1.92
Pcdha9-201ENSMUST00000115659 Gm11568A2A4M2 211 aa3□□□□□ -1.93
Pcdha9-201ENSMUST00000115659 Krtap9-1Q64526 186 aa3□□□□□ -1.93
Pcdha9-201ENSMUST00000115659 Gm11639A0A1D5RLM8 5808 aa2.93□□□□□ -1.94
Pcdha9-201ENSMUST00000115659 Muc19Q6PZE0 7524 aa2.93□□□□□ -1.94
Pcdha9-201ENSMUST00000115659 Phgr1Q8K0G7 91 aa2.91□□□□□ -1.94
Pcdha9-201ENSMUST00000115659 Krtap5-2Q9D5Z7 189 aa2.77□□□□□ -1.97
Pcdha9-201ENSMUST00000115659 Gm4553A0A1B0GSA9 284 aa2.67□□□□□ -1.98
Pcdha9-201ENSMUST00000115659 Hmcn1D3YXG0 5634 aa2.62□□□□□ -1.99
Pcdha9-201ENSMUST00000115659 A0A286YCP9 139 aa2.58□□□□□ -2
Pcdha9-201ENSMUST00000115659 Krtap6-2O08884 159 aa2.49□□□□□ -2.01
Pcdha9-201ENSMUST00000115659 Gm2431E9Q8S1 172 aa2.47□□□□□ -2.01
Pcdha9-201ENSMUST00000115659 AhnakE9Q616 5656 aaKnown RBP2.41□□□□□ -2.02
Pcdha9-201ENSMUST00000115659 Krtap21-1Q925H4 128 aa2.36□□□□□ -2.03
Pcdha9-201ENSMUST00000115659 Gm10153A0A1B0GRL1 320 aa2.35□□□□□ -2.03
Pcdha9-201ENSMUST00000115659 Gm45337A0A1B0GS71 263 aa2.28□□□□□ -2.04
Pcdha9-201ENSMUST00000115659 Gm40460A0A1B0GR10 244 aa2.27□□□□□ -2.05
Pcdha9-201ENSMUST00000115659 Gm7579A0A1B0GRJ4 243 aa2.27□□□□□ -2.05
Pcdha9-201ENSMUST00000115659 Krtap5-5Q2TA51 241 aa2.27□□□□□ -2.05
Pcdha9-201ENSMUST00000115659 Krtap5-4Q62220 223 aa2.27□□□□□ -2.05
Pcdha9-201ENSMUST00000115659 Gm39115A0A1B0GSH7 232 aa2.18□□□□□ -2.06
Pcdha9-201ENSMUST00000115659 Gm11567Q9D141 195 aa2.12□□□□□ -2.07
Pcdha9-201ENSMUST00000115659 Gm45618A0A1B0GSA0 219 aa1.95□□□□□ -2.1
Pcdha9-201ENSMUST00000115659 Gm29735A0A1B0GT06 219 aa1.71□□□□□ -2.14
Pcdha9-201ENSMUST00000115659 Krtap5-1Q64507 230 aa1.45□□□□□ -2.18
Pcdha9-201ENSMUST00000115659 Gm4559A4IF42 199 aa1.14□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 118.7 ms