RNA–Protein interactions for RNA: ENSMUST00000113684.7

Tpm1-204, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 887 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-204ENSMUST00000113684 Pcp4P63054 62 aa6.42□□□□□ -1.38
Tpm1-204ENSMUST00000113684 Muc19Q6PZE0 7524 aa6.4□□□□□ -1.38
Tpm1-204ENSMUST00000113684 Gm11568A2A4M2 211 aa6.39□□□□□ -1.39
Tpm1-204ENSMUST00000113684 Krtap9-1Q64526 186 aa6.39□□□□□ -1.39
Tpm1-204ENSMUST00000113684 H2al1mQ9DAD9 105 aa6.39□□□□□ -1.39
Tpm1-204ENSMUST00000113684 Syne1Q6ZWR6 8799 aa6.36□□□□□ -1.39
Tpm1-204ENSMUST00000113684 Gm2431E9Q8S1 172 aa6.3□□□□□ -1.4
Tpm1-204ENSMUST00000113684 Krtap7-1Q9D3I6 87 aa6.24□□□□□ -1.41
Tpm1-204ENSMUST00000113684 4933415A04RikQ9D443 101 aa6.22□□□□□ -1.41
Tpm1-204ENSMUST00000113684 Lce3bQ9CQM7 98 aa6.21□□□□□ -1.42
Tpm1-204ENSMUST00000113684 Gm12216A0A1W2P827 62 aa6.17□□□□□ -1.42
Tpm1-204ENSMUST00000113684 Gm10272F7CZ33 110 aa6.17□□□□□ -1.42
Tpm1-204ENSMUST00000113684 Ndufs5Q99LY9 106 aa6.15□□□□□ -1.42
Tpm1-204ENSMUST00000113684 Gm10337F7DEP7 55 aa6.12□□□□□ -1.43
Tpm1-204ENSMUST00000113684 Gm45337A0A1B0GS71 263 aa6.1□□□□□ -1.43
Tpm1-204ENSMUST00000113684 Lce1fB9EJP6 147 aa6.07□□□□□ -1.44
Tpm1-204ENSMUST00000113684 Romo1P60603 79 aa6.07□□□□□ -1.44
Tpm1-204ENSMUST00000113684 Lce1cQ9D1C5 147 aa6.07□□□□□ -1.44
Tpm1-204ENSMUST00000113684 Hmcn1D3YXG0 5634 aa6□□□□□ -1.45
Tpm1-204ENSMUST00000113684 DstQ91ZU6 7393 aaKnown RBP5.98□□□□□ -1.45
Tpm1-204ENSMUST00000113684 Gm3646F6S692 53 aa5.96□□□□□ -1.46
Tpm1-204ENSMUST00000113684 NebE9Q1W3 7152 aa5.94□□□□□ -1.46
Tpm1-204ENSMUST00000113684 Krtap19-4Q925H7 84 aa5.89□□□□□ -1.47
Tpm1-204ENSMUST00000113684 Gm39115A0A1B0GSH7 232 aa5.87□□□□□ -1.47
Tpm1-204ENSMUST00000113684 Gm40460A0A1B0GR10 244 aa5.86□□□□□ -1.47
Tpm1-204ENSMUST00000113684 Gm7579A0A1B0GRJ4 243 aa5.86□□□□□ -1.47
Tpm1-204ENSMUST00000113684 Gm10153A0A1B0GRL1 320 aa5.86□□□□□ -1.47
Tpm1-204ENSMUST00000113684 Krtap5-5Q2TA51 241 aa5.86□□□□□ -1.47
Tpm1-204ENSMUST00000113684 Krtap5-4Q62220 223 aa5.86□□□□□ -1.47
Tpm1-204ENSMUST00000113684 Krtap4-16Q91W93 202 aa5.77□□□□□ -1.49
Tpm1-204ENSMUST00000113684 Tnp1P10856 55 aa5.75□□□□□ -1.49
Tpm1-204ENSMUST00000113684 Gm11938Q9D3H4 131 aa5.75□□□□□ -1.49
Tpm1-204ENSMUST00000113684 Mt1P02802 61 aaKnown RBP5.72□□□□□ -1.49
Tpm1-204ENSMUST00000113684 Sprr2fO70557 76 aa5.58□□□□□ -1.52
Tpm1-204ENSMUST00000113684 Gm45618A0A1B0GSA0 219 aa5.57□□□□□ -1.52
Tpm1-204ENSMUST00000113684 SvipQ3UZP4 77 aa5.55□□□□□ -1.52
Tpm1-204ENSMUST00000113684 Gm40193A0A1B0GT39 78 aa5.53□□□□□ -1.52
Tpm1-204ENSMUST00000113684 Lce3cQ91V05 98 aa5.52□□□□□ -1.53
Tpm1-204ENSMUST00000113684 AhnakE9Q616 5656 aaKnown RBP5.48□□□□□ -1.53
Tpm1-204ENSMUST00000113684 Lce3dE9Q8V1 98 aa5.44□□□□□ -1.54
Tpm1-204ENSMUST00000113684 Mt3P28184 68 aa5.33□□□□□ -1.56
Tpm1-204ENSMUST00000113684 ObscnA2AAJ9 8891 aaKnown RBP5.33□□□□□ -1.56
Tpm1-204ENSMUST00000113684 Lce3eF8VQJ0 98 aa5.28□□□□□ -1.56
Tpm1-204ENSMUST00000113684 Lce3fQ6PAI4 98 aa5.28□□□□□ -1.56
Tpm1-204ENSMUST00000113684 Krtap28-10A0A1Y7VP58 119 aa5.15□□□□□ -1.59
Tpm1-204ENSMUST00000113684 A0A1Y7VLE6 161 aa5.12□□□□□ -1.59
Tpm1-204ENSMUST00000113684 Sprr2dO70555 85 aa5.08□□□□□ -1.6
Tpm1-204ENSMUST00000113684 Krtap28-13A0A087WQP5 138 aa5.06□□□□□ -1.6
Tpm1-204ENSMUST00000113684 4933428G20RikQ9D3X4 101 aa5.06□□□□□ -1.6
Tpm1-204ENSMUST00000113684 Lce3aQ497I5 98 aa5.04□□□□□ -1.6
Tpm1-204ENSMUST00000113684 Gm10100J3QK64 120 aa5□□□□□ -1.61
Tpm1-204ENSMUST00000113684 Mp68P56379 58 aa5□□□□□ -1.61
Tpm1-204ENSMUST00000113684 A030005K14RikA0A1Y7VNY1 122 aa4.95□□□□□ -1.62
Tpm1-204ENSMUST00000113684 Sprr2eO70556 76 aa4.72□□□□□ -1.65
Tpm1-204ENSMUST00000113684 Gm20538F6Z9R1 75 aa4.64□□□□□ -1.67
Tpm1-204ENSMUST00000113684 Gm7544A0A1Y7VJ58 118 aa4.53□□□□□ -1.68
Tpm1-204ENSMUST00000113684 Gm10024A0A0A0MQA4 119 aa4.52□□□□□ -1.69
Tpm1-204ENSMUST00000113684 A0A1Y7VJ07 166 aa4.52□□□□□ -1.69
Tpm1-204ENSMUST00000113684 Sprr2hO70559 108 aa4.49□□□□□ -1.69
Tpm1-204ENSMUST00000113684 Gm10142J3KMP7 120 aa4.47□□□□□ -1.69
Tpm1-204ENSMUST00000113684 Muc16A0A140LJ72 8478 aa4.45□□□□□ -1.7
Tpm1-204ENSMUST00000113684 A030014E15RikA0A1Y7VJV2 120 aa4.41□□□□□ -1.7
Tpm1-204ENSMUST00000113684 Krtap31-2Q8CAY5 177 aa4.31□□□□□ -1.72
Tpm1-204ENSMUST00000113684 Gm29735A0A1B0GT06 219 aa4.25□□□□□ -1.73
Tpm1-204ENSMUST00000113684 1110025L11RikO09048 78 aa4.1□□□□□ -1.75
Tpm1-204ENSMUST00000113684 Krtap6-5Q925H3 78 aa4.1□□□□□ -1.75
Tpm1-204ENSMUST00000113684 Gm11567Q9D141 195 aa4.02□□□□□ -1.77
Tpm1-204ENSMUST00000113684 Ndufaf8A2AMZ4 74 aa4□□□□□ -1.77
Tpm1-204ENSMUST00000113684 Krtap31-1Q9D644 177 aa3.96□□□□□ -1.78
Tpm1-204ENSMUST00000113684 A030003K21RikA0A1Y7VIM3 128 aa3.94□□□□□ -1.78
Tpm1-204ENSMUST00000113684 Gm6217A0A1Y7VJK9 128 aa3.74□□□□□ -1.81
Tpm1-204ENSMUST00000113684 Gm10229O08631 77 aa3.68□□□□□ -1.82
Tpm1-204ENSMUST00000113684 Krtap5-1Q64507 230 aa3.54□□□□□ -1.84
Tpm1-204ENSMUST00000113684 Sprr2bO70554 98 aa3.5□□□□□ -1.85
Tpm1-204ENSMUST00000113684 A0A286YCP9 139 aa3.44□□□□□ -1.86
Tpm1-204ENSMUST00000113684 Krtap21-1Q925H4 128 aa3.31□□□□□ -1.88
Tpm1-204ENSMUST00000113684 Gm9112A2AI92 75 aa3.28□□□□□ -1.88
Tpm1-204ENSMUST00000113684 Krtap6-2O08884 159 aa3.28□□□□□ -1.88
Tpm1-204ENSMUST00000113684 Phgr1Q8K0G7 91 aa2.64□□□□□ -1.99
Tpm1-204ENSMUST00000113684 Gm4559A4IF42 199 aa2.5□□□□□ -2.01
Retrieved 80 of 22,080 RNA–protein pairs in 121.7 ms