RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Mt4P47945 62 aa2.66□□□□□ -1.98
Chm-202ENSMUST00000113388 Mt2P02798 61 aa2.66□□□□□ -1.98
Chm-202ENSMUST00000113388 Krtap19-9bQ99NG9 58 aa2.64□□□□□ -1.99
Chm-202ENSMUST00000113388 Krtap8-1O08633 61 aa2.63□□□□□ -1.99
Chm-202ENSMUST00000113388 Sprr2kO70562 68 aa2.59□□□□□ -2
Chm-202ENSMUST00000113388 Krtap4-13Q9D7P3 165 aa2.59□□□□□ -2
Chm-202ENSMUST00000113388 Gm38119A0A0A6YX29 146 aa2.57□□□□□ -2
Chm-202ENSMUST00000113388 Gm10100J3QK64 120 aa2.57□□□□□ -2
Chm-202ENSMUST00000113388 Eppk1Q8R0W0 6548 aa2.57□□□□□ -2
Chm-202ENSMUST00000113388 Gm10142J3KMP7 120 aa2.53□□□□□ -2.01
Chm-202ENSMUST00000113388 Krtap9-3Q3V2C1 136 aa2.52□□□□□ -2.01
Chm-202ENSMUST00000113388 Krtap22-2J3QNX6 67 aa2.51□□□□□ -2.01
Chm-202ENSMUST00000113388 Sprr2gO70558 76 aa2.5□□□□□ -2.01
Chm-202ENSMUST00000113388 Lce1lQ9D1G7 135 aa2.49□□□□□ -2.01
Chm-202ENSMUST00000113388 2300003K06RikA2A4M0 262 aa2.49□□□□□ -2.01
Chm-202ENSMUST00000113388 Sprr2iO70560 76 aa2.44□□□□□ -2.02
Chm-202ENSMUST00000113388 Krtap6-3A0A087WQL6 57 aa2.43□□□□□ -2.02
Chm-202ENSMUST00000113388 Lce3cQ91V05 98 aa2.42□□□□□ -2.02
Chm-202ENSMUST00000113388 Gm10024A0A0A0MQA4 119 aa2.42□□□□□ -2.02
Chm-202ENSMUST00000113388 Lce3bQ9CQM7 98 aa2.42□□□□□ -2.02
Chm-202ENSMUST00000113388 Sprr2fO70557 76 aa2.42□□□□□ -2.02
Chm-202ENSMUST00000113388 Lce1bQ9D149 137 aa2.41□□□□□ -2.02
Chm-202ENSMUST00000113388 Lce3dE9Q8V1 98 aa2.39□□□□□ -2.03
Chm-202ENSMUST00000113388 Gm11938Q9D3H4 131 aa2.38□□□□□ -2.03
Chm-202ENSMUST00000113388 Syne1Q6ZWR6 8799 aa2.38□□□□□ -2.03
Chm-202ENSMUST00000113388 Lce1dQ9D731 133 aa2.36□□□□□ -2.03
Chm-202ENSMUST00000113388 Lce3eF8VQJ0 98 aa2.35□□□□□ -2.03
Chm-202ENSMUST00000113388 Lce3fQ6PAI4 98 aa2.35□□□□□ -2.03
Chm-202ENSMUST00000113388 Lce3aQ497I5 98 aa2.35□□□□□ -2.03
Chm-202ENSMUST00000113388 Lce1a1Q9CQH5 143 aa2.32□□□□□ -2.04
Chm-202ENSMUST00000113388 Sprr2dO70555 85 aa2.28□□□□□ -2.04
Chm-202ENSMUST00000113388 Krtap4-16Q91W93 202 aa2.27□□□□□ -2.05
Chm-202ENSMUST00000113388 Lce1hQ9D6R3 140 aa2.27□□□□□ -2.05
Chm-202ENSMUST00000113388 Macf1Q9QXZ0 7354 aaKnown RBP2.26□□□□□ -2.05
Chm-202ENSMUST00000113388 Krtap20-2E9Q0A8 60 aa2.25□□□□□ -2.05
Chm-202ENSMUST00000113388 Lce1eQ9D139 143 aa2.23□□□□□ -2.05
Chm-202ENSMUST00000113388 Gpr98Q8VHN7 6298 aaKnown RBP2.22□□□□□ -2.05
Chm-202ENSMUST00000113388 Krtap19-4Q925H7 84 aa2.22□□□□□ -2.05
Chm-202ENSMUST00000113388 Lce1kJ3QP15 125 aa2.21□□□□□ -2.06
Chm-202ENSMUST00000113388 Sprr2hO70559 108 aa2.2□□□□□ -2.06
Chm-202ENSMUST00000113388 Sprr2eO70556 76 aa2.19□□□□□ -2.06
Chm-202ENSMUST00000113388 Gm11554B1AQB2 190 aa2.15□□□□□ -2.06
Chm-202ENSMUST00000113388 Lce1fB9EJP6 147 aa2.12□□□□□ -2.07
Chm-202ENSMUST00000113388 Lce1cQ9D1C5 147 aa2.12□□□□□ -2.07
Chm-202ENSMUST00000113388 Muc16A0A140LJ72 8478 aa2.1□□□□□ -2.07
Chm-202ENSMUST00000113388 Gm11568A2A4M2 211 aa2.06□□□□□ -2.08
Chm-202ENSMUST00000113388 Krtap9-1Q64526 186 aa2.06□□□□□ -2.08
Chm-202ENSMUST00000113388 Gm11559Q9D3H7 191 aa2.05□□□□□ -2.08
Chm-202ENSMUST00000113388 Krtap5-2Q9D5Z7 189 aa2.05□□□□□ -2.08
Chm-202ENSMUST00000113388 Kmt2dQ6PDK2 5588 aa2.04□□□□□ -2.08
Chm-202ENSMUST00000113388 Gm11639A0A1D5RLM8 5808 aa2.04□□□□□ -2.08
Chm-202ENSMUST00000113388 Muc19Q6PZE0 7524 aa2□□□□□ -2.09
Chm-202ENSMUST00000113388 Hmcn1D3YXG0 5634 aa2□□□□□ -2.09
Chm-202ENSMUST00000113388 Gm45618A0A1B0GSA0 219 aa1.98□□□□□ -2.09
Chm-202ENSMUST00000113388 ObscnA2AAJ9 8891 aaKnown RBP1.97□□□□□ -2.09
Chm-202ENSMUST00000113388 Mt3P28184 68 aa1.97□□□□□ -2.09
Chm-202ENSMUST00000113388 NebE9Q1W3 7152 aa1.96□□□□□ -2.1
Chm-202ENSMUST00000113388 DstQ91ZU6 7393 aaKnown RBP1.95□□□□□ -2.1
Chm-202ENSMUST00000113388 Gm4553A0A1B0GSA9 284 aa1.95□□□□□ -2.1
Chm-202ENSMUST00000113388 Mt1P02802 61 aaKnown RBP1.95□□□□□ -2.1
Chm-202ENSMUST00000113388 Gm2431E9Q8S1 172 aa1.92□□□□□ -2.1
Chm-202ENSMUST00000113388 Gm39115A0A1B0GSH7 232 aa1.88□□□□□ -2.11
Chm-202ENSMUST00000113388 Gm10153A0A1B0GRL1 320 aa1.84□□□□□ -2.11
Chm-202ENSMUST00000113388 Gm45337A0A1B0GS71 263 aa1.84□□□□□ -2.11
Chm-202ENSMUST00000113388 Gm40460A0A1B0GR10 244 aa1.76□□□□□ -2.13
Chm-202ENSMUST00000113388 Gm7579A0A1B0GRJ4 243 aa1.76□□□□□ -2.13
Chm-202ENSMUST00000113388 Krtap5-5Q2TA51 241 aa1.76□□□□□ -2.13
Chm-202ENSMUST00000113388 Krtap5-4Q62220 223 aa1.76□□□□□ -2.13
Chm-202ENSMUST00000113388 AhnakE9Q616 5656 aaKnown RBP1.73□□□□□ -2.13
Chm-202ENSMUST00000113388 Gm29735A0A1B0GT06 219 aa1.68□□□□□ -2.14
Chm-202ENSMUST00000113388 Gm11567Q9D141 195 aa1.61□□□□□ -2.15
Chm-202ENSMUST00000113388 Sprr2bO70554 98 aa1.53□□□□□ -2.16
Chm-202ENSMUST00000113388 Phgr1Q8K0G7 91 aa1.41□□□□□ -2.18
Chm-202ENSMUST00000113388 1110025L11RikO09048 78 aa1.41□□□□□ -2.18
Chm-202ENSMUST00000113388 Krtap6-5Q925H3 78 aa1.41□□□□□ -2.18
Chm-202ENSMUST00000113388 Krtap5-1Q64507 230 aa1.39□□□□□ -2.19
Chm-202ENSMUST00000113388 Gm10229O08631 77 aa1.27□□□□□ -2.21
Chm-202ENSMUST00000113388 Gm4559A4IF42 199 aa1.26□□□□□ -2.21
Chm-202ENSMUST00000113388 Krtap6-2O08884 159 aa1.12□□□□□ -2.23
Chm-202ENSMUST00000113388 Krtap21-1Q925H4 128 aa1.12□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 80.4 ms