RNA–Protein interactions for RNA: ENSMUST00000112053.1

Trex1-202, Transcript of Three-prime repair exonuclease 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trex1, Length 1,054 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1-202ENSMUST00000112053 Gm11639A0A1D5RLM8 5808 aa3.45□□□□□ -1.86
Trex1-202ENSMUST00000112053 Gm4553A0A1B0GSA9 284 aa3.43□□□□□ -1.86
Trex1-202ENSMUST00000112053 Syne1Q6ZWR6 8799 aa3.42□□□□□ -1.86
Trex1-202ENSMUST00000112053 Ndufs5Q99LY9 106 aa3.41□□□□□ -1.86
Trex1-202ENSMUST00000112053 Gm11568A2A4M2 211 aa3.4□□□□□ -1.87
Trex1-202ENSMUST00000112053 Krtap9-1Q64526 186 aa3.4□□□□□ -1.87
Trex1-202ENSMUST00000112053 Kmt2dQ6PDK2 5588 aa3.38□□□□□ -1.87
Trex1-202ENSMUST00000112053 Camk2n1Q6QWF9 78 aa3.36□□□□□ -1.87
Trex1-202ENSMUST00000112053 Gm2431E9Q8S1 172 aa3.34□□□□□ -1.87
Trex1-202ENSMUST00000112053 Muc19Q6PZE0 7524 aa3.33□□□□□ -1.88
Trex1-202ENSMUST00000112053 Lce3bQ9CQM7 98 aa3.3□□□□□ -1.88
Trex1-202ENSMUST00000112053 Gpr98Q8VHN7 6298 aaKnown RBP3.29□□□□□ -1.88
Trex1-202ENSMUST00000112053 Gm3880A0A1B0GSB3 72 aa3.27□□□□□ -1.89
Trex1-202ENSMUST00000112053 Gm45337A0A1B0GS71 263 aa3.26□□□□□ -1.89
Trex1-202ENSMUST00000112053 Gm10272F7CZ33 110 aa3.23□□□□□ -1.89
Trex1-202ENSMUST00000112053 Lce1fB9EJP6 147 aa3.21□□□□□ -1.9
Trex1-202ENSMUST00000112053 Lce1cQ9D1C5 147 aa3.21□□□□□ -1.9
Trex1-202ENSMUST00000112053 Gm12216A0A1W2P827 62 aa3.18□□□□□ -1.9
Trex1-202ENSMUST00000112053 Romo1P60603 79 aa3.18□□□□□ -1.9
Trex1-202ENSMUST00000112053 Krtap7-1Q9D3I6 87 aa3.16□□□□□ -1.9
Trex1-202ENSMUST00000112053 Hmcn1D3YXG0 5634 aa3.16□□□□□ -1.9
Trex1-202ENSMUST00000112053 Gm10153A0A1B0GRL1 320 aa3.15□□□□□ -1.91
Trex1-202ENSMUST00000112053 Gm40460A0A1B0GR10 244 aa3.14□□□□□ -1.91
Trex1-202ENSMUST00000112053 Gm7579A0A1B0GRJ4 243 aa3.14□□□□□ -1.91
Trex1-202ENSMUST00000112053 Krtap5-5Q2TA51 241 aa3.14□□□□□ -1.91
Trex1-202ENSMUST00000112053 Krtap5-4Q62220 223 aa3.14□□□□□ -1.91
Trex1-202ENSMUST00000112053 Gm39115A0A1B0GSH7 232 aa3.12□□□□□ -1.91
Trex1-202ENSMUST00000112053 Krtap19-4Q925H7 84 aa3.1□□□□□ -1.91
Trex1-202ENSMUST00000112053 DstQ91ZU6 7393 aaKnown RBP3.09□□□□□ -1.92
Trex1-202ENSMUST00000112053 Gm11938Q9D3H4 131 aa3.08□□□□□ -1.92
Trex1-202ENSMUST00000112053 Mt1P02802 61 aaKnown RBP3.07□□□□□ -1.92
Trex1-202ENSMUST00000112053 NebE9Q1W3 7152 aa3.04□□□□□ -1.92
Trex1-202ENSMUST00000112053 Krtap4-16Q91W93 202 aa2.99□□□□□ -1.93
Trex1-202ENSMUST00000112053 Gm40193A0A1B0GT39 78 aa2.95□□□□□ -1.94
Trex1-202ENSMUST00000112053 Gm45618A0A1B0GSA0 219 aa2.94□□□□□ -1.94
Trex1-202ENSMUST00000112053 Lce3cQ91V05 98 aa2.91□□□□□ -1.94
Trex1-202ENSMUST00000112053 Sprr2fO70557 76 aa2.87□□□□□ -1.95
Trex1-202ENSMUST00000112053 Lce3dE9Q8V1 98 aa2.85□□□□□ -1.95
Trex1-202ENSMUST00000112053 Mt3P28184 68 aa2.84□□□□□ -1.95
Trex1-202ENSMUST00000112053 Mp68P56379 58 aa2.84□□□□□ -1.95
Trex1-202ENSMUST00000112053 AhnakE9Q616 5656 aaKnown RBP2.82□□□□□ -1.96
Trex1-202ENSMUST00000112053 ObscnA2AAJ9 8891 aaKnown RBP2.81□□□□□ -1.96
Trex1-202ENSMUST00000112053 Tnp1P10856 55 aa2.75□□□□□ -1.97
Trex1-202ENSMUST00000112053 Gm20538F6Z9R1 75 aa2.74□□□□□ -1.97
Trex1-202ENSMUST00000112053 Lce3eF8VQJ0 98 aa2.74□□□□□ -1.97
Trex1-202ENSMUST00000112053 Lce3fQ6PAI4 98 aa2.74□□□□□ -1.97
Trex1-202ENSMUST00000112053 A0A1Y7VLE6 161 aa2.73□□□□□ -1.97
Trex1-202ENSMUST00000112053 Gm10100J3QK64 120 aa2.69□□□□□ -1.98
Trex1-202ENSMUST00000112053 Lce3aQ497I5 98 aa2.62□□□□□ -1.99
Trex1-202ENSMUST00000112053 4933428G20RikQ9D3X4 101 aa2.61□□□□□ -1.99
Trex1-202ENSMUST00000112053 Ndufaf8A2AMZ4 74 aa2.57□□□□□ -2
Trex1-202ENSMUST00000112053 Sprr2dO70555 85 aa2.49□□□□□ -2.01
Trex1-202ENSMUST00000112053 Sprr2eO70556 76 aa2.48□□□□□ -2.01
Trex1-202ENSMUST00000112053 Gm10024A0A0A0MQA4 119 aa2.41□□□□□ -2.02
Trex1-202ENSMUST00000112053 A0A1Y7VJ07 166 aa2.35□□□□□ -2.03
Trex1-202ENSMUST00000112053 Muc16A0A140LJ72 8478 aa2.34□□□□□ -2.03
Trex1-202ENSMUST00000112053 Gm29735A0A1B0GT06 219 aa2.3□□□□□ -2.04
Trex1-202ENSMUST00000112053 Sprr2hO70559 108 aa2.3□□□□□ -2.04
Trex1-202ENSMUST00000112053 Gm9112A2AI92 75 aa2.26□□□□□ -2.05
Trex1-202ENSMUST00000112053 Gm10142J3KMP7 120 aa2.25□□□□□ -2.05
Trex1-202ENSMUST00000112053 1110025L11RikO09048 78 aa2.16□□□□□ -2.06
Trex1-202ENSMUST00000112053 Krtap6-5Q925H3 78 aa2.16□□□□□ -2.06
Trex1-202ENSMUST00000112053 Gm11567Q9D141 195 aa2.16□□□□□ -2.06
Trex1-202ENSMUST00000112053 Krtap31-2Q8CAY5 177 aa1.99□□□□□ -2.09
Trex1-202ENSMUST00000112053 Krtap31-1Q9D644 177 aa1.95□□□□□ -2.1
Trex1-202ENSMUST00000112053 A030003K21RikA0A1Y7VIM3 128 aa1.94□□□□□ -2.1
Trex1-202ENSMUST00000112053 Gm10229O08631 77 aa1.94□□□□□ -2.1
Trex1-202ENSMUST00000112053 Krtap5-1Q64507 230 aa1.84□□□□□ -2.11
Trex1-202ENSMUST00000112053 Krtap28-10A0A1Y7VP58 119 aa1.8□□□□□ -2.12
Trex1-202ENSMUST00000112053 Sprr2bO70554 98 aa1.79□□□□□ -2.12
Trex1-202ENSMUST00000112053 Krtap6-2O08884 159 aa1.76□□□□□ -2.13
Trex1-202ENSMUST00000112053 Krtap21-1Q925H4 128 aa1.74□□□□□ -2.13
Trex1-202ENSMUST00000112053 A0A286YCP9 139 aa1.59□□□□□ -2.15
Trex1-202ENSMUST00000112053 Gm7544A0A1Y7VJ58 118 aa1.54□□□□□ -2.16
Trex1-202ENSMUST00000112053 Gm6217A0A1Y7VJK9 128 aa1.46□□□□□ -2.18
Trex1-202ENSMUST00000112053 A030005K14RikA0A1Y7VNY1 122 aa1.44□□□□□ -2.18
Trex1-202ENSMUST00000112053 Krtap28-13A0A087WQP5 138 aa1.41□□□□□ -2.18
Trex1-202ENSMUST00000112053 Phgr1Q8K0G7 91 aa1.39□□□□□ -2.19
Trex1-202ENSMUST00000112053 Gm4559A4IF42 199 aa1.35□□□□□ -2.19
Trex1-202ENSMUST00000112053 A030014E15RikA0A1Y7VJV2 120 aa1.09□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 77.8 ms