RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Lce1dQ9D731 133 aa7.8□□□□□ -1.16
Ccdc88a-202ENSMUST00000109477 Gm38119A0A0A6YX29 146 aa7.74□□□□□ -1.17
Ccdc88a-202ENSMUST00000109477 Sprr2kO70562 68 aa7.7□□□□□ -1.18
Ccdc88a-202ENSMUST00000109477 Krtap6-3A0A087WQL6 57 aa7.69□□□□□ -1.18
Ccdc88a-202ENSMUST00000109477 2300003K06RikA2A4M0 262 aa7.67□□□□□ -1.18
Ccdc88a-202ENSMUST00000109477 2310046K23RikA0A0A6YVW6 87 aa7.6□□□□□ -1.19
Ccdc88a-202ENSMUST00000109477 Lce1lQ9D1G7 135 aa7.49□□□□□ -1.21
Ccdc88a-202ENSMUST00000109477 A0A286YCP9 139 aa7.48□□□□□ -1.21
Ccdc88a-202ENSMUST00000109477 Gm10272F7CZ33 110 aa7.38□□□□□ -1.23
Ccdc88a-202ENSMUST00000109477 Sprr2gO70558 76 aa7.18□□□□□ -1.26
Ccdc88a-202ENSMUST00000109477 Lce1a1Q9CQH5 143 aa7.12□□□□□ -1.27
Ccdc88a-202ENSMUST00000109477 Syne1Q6ZWR6 8799 aa7.09□□□□□ -1.27
Ccdc88a-202ENSMUST00000109477 Gm11938Q9D3H4 131 aa7.04□□□□□ -1.28
Ccdc88a-202ENSMUST00000109477 Gm20538F6Z9R1 75 aa7.04□□□□□ -1.28
Ccdc88a-202ENSMUST00000109477 Krtap20-2E9Q0A8 60 aa7.03□□□□□ -1.28
Ccdc88a-202ENSMUST00000109477 Lce3bQ9CQM7 98 aa7.01□□□□□ -1.29
Ccdc88a-202ENSMUST00000109477 Ndufaf8A2AMZ4 74 aa6.96□□□□□ -1.29
Ccdc88a-202ENSMUST00000109477 Lce1kJ3QP15 125 aa6.94□□□□□ -1.3
Ccdc88a-202ENSMUST00000109477 Sprr2iO70560 76 aa6.93□□□□□ -1.3
Ccdc88a-202ENSMUST00000109477 Krtap5-2Q9D5Z7 189 aa6.93□□□□□ -1.3
Ccdc88a-202ENSMUST00000109477 Sprr2dO70555 85 aa6.83□□□□□ -1.32
Ccdc88a-202ENSMUST00000109477 Lce1eQ9D139 143 aa6.76□□□□□ -1.33
Ccdc88a-202ENSMUST00000109477 Gm11568A2A4M2 211 aa6.73□□□□□ -1.33
Ccdc88a-202ENSMUST00000109477 Krtap9-1Q64526 186 aa6.73□□□□□ -1.33
Ccdc88a-202ENSMUST00000109477 Krtap19-4Q925H7 84 aa6.64□□□□□ -1.35
Ccdc88a-202ENSMUST00000109477 Gm11559Q9D3H7 191 aa6.64□□□□□ -1.35
Ccdc88a-202ENSMUST00000109477 Lce1fB9EJP6 147 aa6.61□□□□□ -1.35
Ccdc88a-202ENSMUST00000109477 Lce1cQ9D1C5 147 aa6.61□□□□□ -1.35
Ccdc88a-202ENSMUST00000109477 Gm4553A0A1B0GSA9 284 aa6.54□□□□□ -1.36
Ccdc88a-202ENSMUST00000109477 Lce3cQ91V05 98 aa6.54□□□□□ -1.36
Ccdc88a-202ENSMUST00000109477 4933428G20RikQ9D3X4 101 aa6.49□□□□□ -1.37
Ccdc88a-202ENSMUST00000109477 Macf1Q9QXZ0 7354 aaKnown RBP6.48□□□□□ -1.37
Ccdc88a-202ENSMUST00000109477 Mt1P02802 61 aaKnown RBP6.46□□□□□ -1.38
Ccdc88a-202ENSMUST00000109477 Lce3dE9Q8V1 98 aa6.45□□□□□ -1.38
Ccdc88a-202ENSMUST00000109477 Gm11554B1AQB2 190 aa6.44□□□□□ -1.38
Ccdc88a-202ENSMUST00000109477 Lce3eF8VQJ0 98 aa6.4□□□□□ -1.38
Ccdc88a-202ENSMUST00000109477 Lce3fQ6PAI4 98 aa6.4□□□□□ -1.38
Ccdc88a-202ENSMUST00000109477 Gm45337A0A1B0GS71 263 aa6.34□□□□□ -1.39
Ccdc88a-202ENSMUST00000109477 Kmt2dQ6PDK2 5588 aa6.34□□□□□ -1.39
Ccdc88a-202ENSMUST00000109477 Gm2431E9Q8S1 172 aa6.33□□□□□ -1.4
Ccdc88a-202ENSMUST00000109477 Eppk1Q8R0W0 6548 aa6.32□□□□□ -1.4
Ccdc88a-202ENSMUST00000109477 Gm10153A0A1B0GRL1 320 aa6.32□□□□□ -1.4
Ccdc88a-202ENSMUST00000109477 Gm45618A0A1B0GSA0 219 aa6.28□□□□□ -1.4
Ccdc88a-202ENSMUST00000109477 Gm10100J3QK64 120 aa6.28□□□□□ -1.4
Ccdc88a-202ENSMUST00000109477 ObscnA2AAJ9 8891 aaKnown RBP6.23□□□□□ -1.41
Ccdc88a-202ENSMUST00000109477 Hmcn1D3YXG0 5634 aa6.14□□□□□ -1.43
Ccdc88a-202ENSMUST00000109477 Gm40460A0A1B0GR10 244 aa6.13□□□□□ -1.43
Ccdc88a-202ENSMUST00000109477 Gm7579A0A1B0GRJ4 243 aa6.13□□□□□ -1.43
Ccdc88a-202ENSMUST00000109477 Krtap5-5Q2TA51 241 aa6.13□□□□□ -1.43
Ccdc88a-202ENSMUST00000109477 Krtap5-4Q62220 223 aa6.13□□□□□ -1.43
Ccdc88a-202ENSMUST00000109477 Lce3aQ497I5 98 aa6.13□□□□□ -1.43
Ccdc88a-202ENSMUST00000109477 Gm10142J3KMP7 120 aa6.11□□□□□ -1.43
Ccdc88a-202ENSMUST00000109477 Gm39115A0A1B0GSH7 232 aa5.94□□□□□ -1.46
Ccdc88a-202ENSMUST00000109477 Gm11639A0A1D5RLM8 5808 aa5.94□□□□□ -1.46
Ccdc88a-202ENSMUST00000109477 Sprr2hO70559 108 aa5.92□□□□□ -1.46
Ccdc88a-202ENSMUST00000109477 Mt3P28184 68 aa5.91□□□□□ -1.46
Ccdc88a-202ENSMUST00000109477 Gm9112A2AI92 75 aa5.86□□□□□ -1.47
Ccdc88a-202ENSMUST00000109477 Muc19Q6PZE0 7524 aa5.86□□□□□ -1.47
Ccdc88a-202ENSMUST00000109477 DstQ91ZU6 7393 aaKnown RBP5.73□□□□□ -1.49
Ccdc88a-202ENSMUST00000109477 Gm29735A0A1B0GT06 219 aa5.68□□□□□ -1.5
Ccdc88a-202ENSMUST00000109477 Gm11567Q9D141 195 aa5.62□□□□□ -1.51
Ccdc88a-202ENSMUST00000109477 Sprr2eO70556 76 aa5.54□□□□□ -1.52
Ccdc88a-202ENSMUST00000109477 Gpr98Q8VHN7 6298 aaKnown RBP5.51□□□□□ -1.53
Ccdc88a-202ENSMUST00000109477 Sprr2fO70557 76 aa5.42□□□□□ -1.54
Ccdc88a-202ENSMUST00000109477 NebE9Q1W3 7152 aa5.4□□□□□ -1.55
Ccdc88a-202ENSMUST00000109477 AhnakE9Q616 5656 aaKnown RBP5.39□□□□□ -1.55
Ccdc88a-202ENSMUST00000109477 Krtap4-16Q91W93 202 aa5.37□□□□□ -1.55
Ccdc88a-202ENSMUST00000109477 Krtap31-2Q8CAY5 177 aa5.28□□□□□ -1.56
Ccdc88a-202ENSMUST00000109477 Gm10024A0A0A0MQA4 119 aa5.21□□□□□ -1.58
Ccdc88a-202ENSMUST00000109477 Krtap31-1Q9D644 177 aa5.16□□□□□ -1.58
Ccdc88a-202ENSMUST00000109477 1110025L11RikO09048 78 aa4.82□□□□□ -1.64
Ccdc88a-202ENSMUST00000109477 Krtap6-5Q925H3 78 aa4.82□□□□□ -1.64
Ccdc88a-202ENSMUST00000109477 Muc16A0A140LJ72 8478 aa4.59□□□□□ -1.67
Ccdc88a-202ENSMUST00000109477 Gm10229O08631 77 aa4.29□□□□□ -1.72
Ccdc88a-202ENSMUST00000109477 Sprr2bO70554 98 aa4.16□□□□□ -1.74
Ccdc88a-202ENSMUST00000109477 Krtap5-1Q64507 230 aa4.13□□□□□ -1.75
Ccdc88a-202ENSMUST00000109477 Gm4559A4IF42 199 aa4.07□□□□□ -1.76
Ccdc88a-202ENSMUST00000109477 Krtap21-1Q925H4 128 aa3.93□□□□□ -1.78
Ccdc88a-202ENSMUST00000109477 Krtap6-2O08884 159 aa3.7□□□□□ -1.82
Ccdc88a-202ENSMUST00000109477 Phgr1Q8K0G7 91 aa3.52□□□□□ -1.85
Retrieved 80 of 22,080 RNA–protein pairs in 7.2 ms