RNA–Protein interactions for RNA: ENSMUST00000108909.8

Scn8a-204, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 11,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-204ENSMUST00000108909 Mt4P47945 62 aa2.3□□□□□ -2.04
Scn8a-204ENSMUST00000108909 Rnf213E9Q555 5152 aaKnown RBP2.29□□□□□ -2.04
Scn8a-204ENSMUST00000108909 Abca13Q5SSE9 5034 aa2.28□□□□□ -2.04
Scn8a-204ENSMUST00000108909 Gm11562A0PK51 136 aa2.28□□□□□ -2.04
Scn8a-204ENSMUST00000108909 Muc5bE9Q5I3 4800 aa2.27□□□□□ -2.05
Scn8a-204ENSMUST00000108909 SspoQ8CG65 4998 aa2.24□□□□□ -2.05
Scn8a-204ENSMUST00000108909 Hmcn2A2AJ76 5100 aa2.23□□□□□ -2.05
Scn8a-204ENSMUST00000108909 Krtap4-6Q3V4B7 195 aa2.22□□□□□ -2.05
Scn8a-204ENSMUST00000108909 Fat4Q2PZL6 4981 aa2.21□□□□□ -2.05
Scn8a-204ENSMUST00000108909 A0A1Y7VLE6 161 aa2.2□□□□□ -2.06
Scn8a-204ENSMUST00000108909 ObscnA2AAJ9 8891 aaKnown RBP2.2□□□□□ -2.06
Scn8a-204ENSMUST00000108909 4932415D10RikA0A1W2P6U8 4986 aa2.18□□□□□ -2.06
Scn8a-204ENSMUST00000108909 Lce1a1Q9CQH5 143 aa2.17□□□□□ -2.06
Scn8a-204ENSMUST00000108909 Lce1kJ3QP15 125 aa2.13□□□□□ -2.07
Scn8a-204ENSMUST00000108909 Syne2Q6ZWQ0 6874 aaKnown RBP2.11□□□□□ -2.07
Scn8a-204ENSMUST00000108909 Krtap4-1Q3UUY3 169 aa2.11□□□□□ -2.07
Scn8a-204ENSMUST00000108909 A030003K21RikA0A1Y7VIM3 128 aa2.11□□□□□ -2.07
Scn8a-204ENSMUST00000108909 Ush2AQ2QI47 5193 aa2.1□□□□□ -2.07
Scn8a-204ENSMUST00000108909 Krtap4-7Q9D732 168 aa2.1□□□□□ -2.07
Scn8a-204ENSMUST00000108909 2300003K06RikA2A4M0 262 aa2.09□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Krtap4-2B1AQ85 167 aa2.08□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Kmt2dQ6PDK2 5588 aa2.08□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Krtap4-9B1AQA9 244 aa2.06□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Krtap4-13Q9D7P3 165 aa2.06□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Fsip2A2ARZ3 6995 aa2.05□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Gm11564A2A4L9 201 aa2.05□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Gm11563B1AQ90 168 aa2.05□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Gm11595B1AQA7 289 aa2.05□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Krtap4-8B1AQA8 209 aa2.05□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Gm11596B1AQB0 205 aa2.03□□□□□ -2.08
Scn8a-204ENSMUST00000108909 Gm6217A0A1Y7VJK9 128 aa2.01□□□□□ -2.09
Scn8a-204ENSMUST00000108909 Muc16A0A140LJ72 8478 aa1.99□□□□□ -2.09
Scn8a-204ENSMUST00000108909 Mt1P02802 61 aaKnown RBP1.96□□□□□ -2.1
Scn8a-204ENSMUST00000108909 Sprr2bO70554 98 aa1.92□□□□□ -2.1
Scn8a-204ENSMUST00000108909 A0A1Y7VJ07 166 aa1.87□□□□□ -2.11
Scn8a-204ENSMUST00000108909 A030005K14RikA0A1Y7VNY1 122 aa1.84□□□□□ -2.11
Scn8a-204ENSMUST00000108909 Gm11554B1AQB2 190 aa1.83□□□□□ -2.12
Scn8a-204ENSMUST00000108909 Krtap6-3A0A087WQL6 57 aa1.79□□□□□ -2.12
Scn8a-204ENSMUST00000108909 Macf1Q9QXZ0 7354 aaKnown RBP1.79□□□□□ -2.12
Scn8a-204ENSMUST00000108909 Krtap20-2E9Q0A8 60 aa1.79□□□□□ -2.12
Scn8a-204ENSMUST00000108909 Gpr98Q8VHN7 6298 aaKnown RBP1.79□□□□□ -2.12
Scn8a-204ENSMUST00000108909 A0A1Y7VJH8 109 aa1.77□□□□□ -2.13
Scn8a-204ENSMUST00000108909 Krtap28-13A0A087WQP5 138 aa1.77□□□□□ -2.13
Scn8a-204ENSMUST00000108909 Gm7544A0A1Y7VJ58 118 aa1.75□□□□□ -2.13
Scn8a-204ENSMUST00000108909 Krtap28-10A0A1Y7VP58 119 aa1.75□□□□□ -2.13
Scn8a-204ENSMUST00000108909 Muc19Q6PZE0 7524 aa1.75□□□□□ -2.13
Scn8a-204ENSMUST00000108909 A030014E15RikA0A1Y7VJV2 120 aa1.7□□□□□ -2.14
Scn8a-204ENSMUST00000108909 1110025L11RikO09048 78 aa1.63□□□□□ -2.15
Scn8a-204ENSMUST00000108909 Krtap6-5Q925H3 78 aa1.63□□□□□ -2.15
Scn8a-204ENSMUST00000108909 Eppk1Q8R0W0 6548 aa1.63□□□□□ -2.15
Scn8a-204ENSMUST00000108909 DstQ91ZU6 7393 aaKnown RBP1.61□□□□□ -2.15
Scn8a-204ENSMUST00000108909 Phgr1Q8K0G7 91 aa1.58□□□□□ -2.16
Scn8a-204ENSMUST00000108909 Hmcn1D3YXG0 5634 aa1.58□□□□□ -2.16
Scn8a-204ENSMUST00000108909 Gm11567Q9D141 195 aa1.57□□□□□ -2.16
Scn8a-204ENSMUST00000108909 NebE9Q1W3 7152 aa1.57□□□□□ -2.16
Scn8a-204ENSMUST00000108909 Gm11568A2A4M2 211 aa1.56□□□□□ -2.16
Scn8a-204ENSMUST00000108909 Gm11555B1AQ89 175 aa1.54□□□□□ -2.16
Scn8a-204ENSMUST00000108909 A030005L19RikA0A1Y7VIU2 113 aa1.53□□□□□ -2.16
Scn8a-204ENSMUST00000108909 Gm10229O08631 77 aa1.53□□□□□ -2.16
Scn8a-204ENSMUST00000108909 A0A286YCP9 139 aa1.53□□□□□ -2.16
Scn8a-204ENSMUST00000108909 Gm11639A0A1D5RLM8 5808 aa1.53□□□□□ -2.17
Scn8a-204ENSMUST00000108909 Krtap9-1Q64526 186 aa1.47□□□□□ -2.17
Scn8a-204ENSMUST00000108909 Gm11559Q9D3H7 191 aa1.47□□□□□ -2.17
Scn8a-204ENSMUST00000108909 AhnakE9Q616 5656 aaKnown RBP1.24□□□□□ -2.21
Scn8a-204ENSMUST00000108909 Krtap6-2O08884 159 aa1.21□□□□□ -2.22
Scn8a-204ENSMUST00000108909 Krtap5-2Q9D5Z7 189 aa1.2□□□□□ -2.22
Scn8a-204ENSMUST00000108909 Krtap21-1Q925H4 128 aa1.16□□□□□ -2.22
Scn8a-204ENSMUST00000108909 Gm4553A0A1B0GSA9 284 aa1.12□□□□□ -2.23
Scn8a-204ENSMUST00000108909 Gm10153A0A1B0GRL1 320 aa1.05□□□□□ -2.24
Scn8a-204ENSMUST00000108909 Gm2431E9Q8S1 172 aa1.04□□□□□ -2.24
Scn8a-204ENSMUST00000108909 Gm45337A0A1B0GS71 263 aa1.02□□□□□ -2.25
Scn8a-204ENSMUST00000108909 Gm40460A0A1B0GR10 244 aa1.02□□□□□ -2.25
Scn8a-204ENSMUST00000108909 Gm7579A0A1B0GRJ4 243 aa1.02□□□□□ -2.25
Scn8a-204ENSMUST00000108909 Krtap5-5Q2TA51 241 aa1.02□□□□□ -2.25
Scn8a-204ENSMUST00000108909 Krtap5-4Q62220 223 aa1.02□□□□□ -2.25
Scn8a-204ENSMUST00000108909 Gm39115A0A1B0GSH7 232 aa0.96□□□□□ -2.26
Scn8a-204ENSMUST00000108909 Gm45618A0A1B0GSA0 219 aa0.88□□□□□ -2.27
Scn8a-204ENSMUST00000108909 Gm29735A0A1B0GT06 219 aa0.82□□□□□ -2.28
Scn8a-204ENSMUST00000108909 Krtap5-1Q64507 230 aa0.68□□□□□ -2.3
Scn8a-204ENSMUST00000108909 Gm4559A4IF42 199 aa0.56□□□□□ -2.32
Retrieved 80 of 22,080 RNA–protein pairs in 7.1 ms