RNA–Protein interactions for RNA: ENSMUST00000098948.9

Smarca4-202, Transcript of Transcription activator BRG1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca4, Length 6,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca4-202ENSMUST00000098948 Krtap17-1A2A5X6 109 aa5.82□□□□□ -1.48
Smarca4-202ENSMUST00000098948 Krtap4-9B1AQA9 244 aa5.76□□□□□ -1.49
Smarca4-202ENSMUST00000098948 Krtap19-4Q925H7 84 aa5.75□□□□□ -1.49
Smarca4-202ENSMUST00000098948 Rnf213E9Q555 5152 aaKnown RBP5.75□□□□□ -1.49
Smarca4-202ENSMUST00000098948 Hmcn2A2AJ76 5100 aa5.75□□□□□ -1.49
Smarca4-202ENSMUST00000098948 Gm10024A0A0A0MQA4 119 aa5.67□□□□□ -1.5
Smarca4-202ENSMUST00000098948 Gm11562A0PK51 136 aa5.67□□□□□ -1.5
Smarca4-202ENSMUST00000098948 Lce1eQ9D139 143 aa5.67□□□□□ -1.5
Smarca4-202ENSMUST00000098948 2300003K06RikA2A4M0 262 aa5.65□□□□□ -1.51
Smarca4-202ENSMUST00000098948 Syne2Q6ZWQ0 6874 aaKnown RBP5.6□□□□□ -1.51
Smarca4-202ENSMUST00000098948 Krtap4-13Q9D7P3 165 aa5.58□□□□□ -1.52
Smarca4-202ENSMUST00000098948 Krtap4-7Q9D732 168 aa5.58□□□□□ -1.52
Smarca4-202ENSMUST00000098948 Sprr2fO70557 76 aa5.58□□□□□ -1.52
Smarca4-202ENSMUST00000098948 SspoQ8CG65 4998 aa5.53□□□□□ -1.52
Smarca4-202ENSMUST00000098948 Sprr2eO70556 76 aa5.45□□□□□ -1.54
Smarca4-202ENSMUST00000098948 Fsip2A2ARZ3 6995 aa5.38□□□□□ -1.55
Smarca4-202ENSMUST00000098948 Sprr2dO70555 85 aa5.38□□□□□ -1.55
Smarca4-202ENSMUST00000098948 Krtap6-3A0A087WQL6 57 aa5.33□□□□□ -1.56
Smarca4-202ENSMUST00000098948 Lce1kJ3QP15 125 aa5.31□□□□□ -1.56
Smarca4-202ENSMUST00000098948 Gm11938Q9D3H4 131 aa5.31□□□□□ -1.56
Smarca4-202ENSMUST00000098948 Krtap31-1Q9D644 177 aa5.26□□□□□ -1.57
Smarca4-202ENSMUST00000098948 Sprr2hO70559 108 aa5.21□□□□□ -1.58
Smarca4-202ENSMUST00000098948 Lce1a1Q9CQH5 143 aa5.18□□□□□ -1.58
Smarca4-202ENSMUST00000098948 Gm11555B1AQ89 175 aa5.08□□□□□ -1.6
Smarca4-202ENSMUST00000098948 Mt3P28184 68 aa4.99□□□□□ -1.61
Smarca4-202ENSMUST00000098948 Krtap4-16Q91W93 202 aa4.9□□□□□ -1.63
Smarca4-202ENSMUST00000098948 Krtap20-2E9Q0A8 60 aa4.88□□□□□ -1.63
Smarca4-202ENSMUST00000098948 Gm11554B1AQB2 190 aa4.87□□□□□ -1.63
Smarca4-202ENSMUST00000098948 Mt1P02802 61 aaKnown RBP4.76□□□□□ -1.65
Smarca4-202ENSMUST00000098948 Syne1Q6ZWR6 8799 aa4.67□□□□□ -1.66
Smarca4-202ENSMUST00000098948 Eppk1Q8R0W0 6548 aa4.55□□□□□ -1.68
Smarca4-202ENSMUST00000098948 ObscnA2AAJ9 8891 aaKnown RBP4.26□□□□□ -1.73
Smarca4-202ENSMUST00000098948 Macf1Q9QXZ0 7354 aaKnown RBP4.24□□□□□ -1.73
Smarca4-202ENSMUST00000098948 Gm11559Q9D3H7 191 aa4.19□□□□□ -1.74
Smarca4-202ENSMUST00000098948 DstQ91ZU6 7393 aaKnown RBP4.15□□□□□ -1.75
Smarca4-202ENSMUST00000098948 Gm11568A2A4M2 211 aa4.12□□□□□ -1.75
Smarca4-202ENSMUST00000098948 Krtap9-1Q64526 186 aa4.12□□□□□ -1.75
Smarca4-202ENSMUST00000098948 Krtap31-2Q8CAY5 177 aa4.08□□□□□ -1.76
Smarca4-202ENSMUST00000098948 Kmt2dQ6PDK2 5588 aa4.05□□□□□ -1.76
Smarca4-202ENSMUST00000098948 Sprr2bO70554 98 aa4.05□□□□□ -1.76
Smarca4-202ENSMUST00000098948 Muc16A0A140LJ72 8478 aa4.01□□□□□ -1.77
Smarca4-202ENSMUST00000098948 NebE9Q1W3 7152 aa3.99□□□□□ -1.77
Smarca4-202ENSMUST00000098948 Krtap5-2Q9D5Z7 189 aa3.92□□□□□ -1.78
Smarca4-202ENSMUST00000098948 1110025L11RikO09048 78 aa3.8□□□□□ -1.8
Smarca4-202ENSMUST00000098948 Krtap6-5Q925H3 78 aa3.8□□□□□ -1.8
Smarca4-202ENSMUST00000098948 Gm4553A0A1B0GSA9 284 aa3.72□□□□□ -1.81
Smarca4-202ENSMUST00000098948 Gm11639A0A1D5RLM8 5808 aa3.62□□□□□ -1.83
Smarca4-202ENSMUST00000098948 Gpr98Q8VHN7 6298 aaKnown RBP3.61□□□□□ -1.83
Smarca4-202ENSMUST00000098948 Muc19Q6PZE0 7524 aa3.6□□□□□ -1.83
Smarca4-202ENSMUST00000098948 Gm10229O08631 77 aa3.55□□□□□ -1.84
Smarca4-202ENSMUST00000098948 A030005L19RikA0A1Y7VIU2 113 aa3.52□□□□□ -1.85
Smarca4-202ENSMUST00000098948 Gm2431E9Q8S1 172 aa3.52□□□□□ -1.85
Smarca4-202ENSMUST00000098948 Hmcn1D3YXG0 5634 aa3.48□□□□□ -1.85
Smarca4-202ENSMUST00000098948 Gm10153A0A1B0GRL1 320 aa3.39□□□□□ -1.87
Smarca4-202ENSMUST00000098948 Gm45337A0A1B0GS71 263 aa3.34□□□□□ -1.87
Smarca4-202ENSMUST00000098948 Phgr1Q8K0G7 91 aa3.34□□□□□ -1.88
Smarca4-202ENSMUST00000098948 Gm40460A0A1B0GR10 244 aa3.28□□□□□ -1.89
Smarca4-202ENSMUST00000098948 Gm7579A0A1B0GRJ4 243 aa3.28□□□□□ -1.89
Smarca4-202ENSMUST00000098948 A0A1Y7VJH8 109 aa3.28□□□□□ -1.89
Smarca4-202ENSMUST00000098948 Krtap5-5Q2TA51 241 aa3.28□□□□□ -1.89
Smarca4-202ENSMUST00000098948 Krtap5-4Q62220 223 aa3.28□□□□□ -1.89
Smarca4-202ENSMUST00000098948 AhnakE9Q616 5656 aaKnown RBP3.19□□□□□ -1.9
Smarca4-202ENSMUST00000098948 Gm39115A0A1B0GSH7 232 aa3.11□□□□□ -1.91
Smarca4-202ENSMUST00000098948 Krtap6-2O08884 159 aa2.93□□□□□ -1.94
Smarca4-202ENSMUST00000098948 Krtap21-1Q925H4 128 aa2.78□□□□□ -1.96
Smarca4-202ENSMUST00000098948 Gm45618A0A1B0GSA0 219 aa2.74□□□□□ -1.97
Smarca4-202ENSMUST00000098948 Gm11567Q9D141 195 aa2.63□□□□□ -1.99
Smarca4-202ENSMUST00000098948 A0A1Y7VLE6 161 aa2.54□□□□□ -2
Smarca4-202ENSMUST00000098948 Gm29735A0A1B0GT06 219 aa2.45□□□□□ -2.02
Smarca4-202ENSMUST00000098948 Krtap5-1Q64507 230 aa1.92□□□□□ -2.1
Smarca4-202ENSMUST00000098948 A0A286YCP9 139 aa1.64□□□□□ -2.15
Smarca4-202ENSMUST00000098948 A0A1Y7VJ07 166 aa1.54□□□□□ -2.16
Smarca4-202ENSMUST00000098948 Krtap28-13A0A087WQP5 138 aa1.5□□□□□ -2.17
Smarca4-202ENSMUST00000098948 Gm4559A4IF42 199 aa1.3□□□□□ -2.2
Smarca4-202ENSMUST00000098948 A030014E15RikA0A1Y7VJV2 120 aa1.21□□□□□ -2.22
Smarca4-202ENSMUST00000098948 Krtap28-10A0A1Y7VP58 119 aa1.07□□□□□ -2.24
Smarca4-202ENSMUST00000098948 A030005K14RikA0A1Y7VNY1 122 aa1.05□□□□□ -2.24
Smarca4-202ENSMUST00000098948 Gm7544A0A1Y7VJ58 118 aa0.89□□□□□ -2.27
Smarca4-202ENSMUST00000098948 A030003K21RikA0A1Y7VIM3 128 aa0.88□□□□□ -2.27
Smarca4-202ENSMUST00000098948 Gm6217A0A1Y7VJK9 128 aa0.69□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 9.3 ms