RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Gm11563B1AQ90 168 aa6.33□□□□□ -1.4
Smarcc1-201ENSMUST00000088716 Gm11595B1AQA7 289 aa6.33□□□□□ -1.4
Smarcc1-201ENSMUST00000088716 Krtap4-8B1AQA8 209 aa6.33□□□□□ -1.4
Smarcc1-201ENSMUST00000088716 Sprr2dO70555 85 aa6.32□□□□□ -1.4
Smarcc1-201ENSMUST00000088716 Ubr4A2AN08 5180 aa6.32□□□□□ -1.4
Smarcc1-201ENSMUST00000088716 Krtap4-7Q9D732 168 aa6.28□□□□□ -1.4
Smarcc1-201ENSMUST00000088716 Krtap4-9B1AQA9 244 aa6.28□□□□□ -1.4
Smarcc1-201ENSMUST00000088716 Gm11938Q9D3H4 131 aa6.27□□□□□ -1.41
Smarcc1-201ENSMUST00000088716 Fat4Q2PZL6 4981 aa6.25□□□□□ -1.41
Smarcc1-201ENSMUST00000088716 ZanO88799 5376 aa6.21□□□□□ -1.41
Smarcc1-201ENSMUST00000088716 Krtap17-1A2A5X6 109 aa6.18□□□□□ -1.42
Smarcc1-201ENSMUST00000088716 Lce1kJ3QP15 125 aa6.17□□□□□ -1.42
Smarcc1-201ENSMUST00000088716 Muc5bE9Q5I3 4800 aa6.16□□□□□ -1.42
Smarcc1-201ENSMUST00000088716 Abca13Q5SSE9 5034 aa6.16□□□□□ -1.42
Smarcc1-201ENSMUST00000088716 Krtap4-13Q9D7P3 165 aa6.13□□□□□ -1.43
Smarcc1-201ENSMUST00000088716 Syne1Q6ZWR6 8799 aa6.12□□□□□ -1.43
Smarcc1-201ENSMUST00000088716 Hmcn2A2AJ76 5100 aa6.12□□□□□ -1.43
Smarcc1-201ENSMUST00000088716 Mt3P28184 68 aa6.08□□□□□ -1.44
Smarcc1-201ENSMUST00000088716 Rnf213E9Q555 5152 aaKnown RBP5.88□□□□□ -1.47
Smarcc1-201ENSMUST00000088716 Fsip2A2ARZ3 6995 aa5.79□□□□□ -1.48
Smarcc1-201ENSMUST00000088716 Krtap4-16Q91W93 202 aa5.77□□□□□ -1.48
Smarcc1-201ENSMUST00000088716 Syne2Q6ZWQ0 6874 aaKnown RBP5.76□□□□□ -1.49
Smarcc1-201ENSMUST00000088716 Lce1a1Q9CQH5 143 aa5.73□□□□□ -1.49
Smarcc1-201ENSMUST00000088716 Ush2AQ2QI47 5193 aa5.71□□□□□ -1.5
Smarcc1-201ENSMUST00000088716 Krtap6-3A0A087WQL6 57 aa5.67□□□□□ -1.5
Smarcc1-201ENSMUST00000088716 SspoQ8CG65 4998 aa5.58□□□□□ -1.52
Smarcc1-201ENSMUST00000088716 Mt1P02802 61 aaKnown RBP5.56□□□□□ -1.52
Smarcc1-201ENSMUST00000088716 Gm11554B1AQB2 190 aa5.53□□□□□ -1.52
Smarcc1-201ENSMUST00000088716 Sprr2bO70554 98 aa5.44□□□□□ -1.54
Smarcc1-201ENSMUST00000088716 Krtap20-2E9Q0A8 60 aa5.32□□□□□ -1.56
Smarcc1-201ENSMUST00000088716 ObscnA2AAJ9 8891 aaKnown RBP5.14□□□□□ -1.59
Smarcc1-201ENSMUST00000088716 Krtap31-2Q8CAY5 177 aa5.14□□□□□ -1.59
Smarcc1-201ENSMUST00000088716 Muc16A0A140LJ72 8478 aa5.01□□□□□ -1.61
Smarcc1-201ENSMUST00000088716 Eppk1Q8R0W0 6548 aa4.9□□□□□ -1.63
Smarcc1-201ENSMUST00000088716 Gm11555B1AQ89 175 aa4.72□□□□□ -1.65
Smarcc1-201ENSMUST00000088716 Kmt2dQ6PDK2 5588 aa4.7□□□□□ -1.66
Smarcc1-201ENSMUST00000088716 DstQ91ZU6 7393 aaKnown RBP4.66□□□□□ -1.66
Smarcc1-201ENSMUST00000088716 Macf1Q9QXZ0 7354 aaKnown RBP4.66□□□□□ -1.66
Smarcc1-201ENSMUST00000088716 1110025L11RikO09048 78 aa4.58□□□□□ -1.68
Smarcc1-201ENSMUST00000088716 Krtap6-5Q925H3 78 aa4.58□□□□□ -1.68
Smarcc1-201ENSMUST00000088716 NebE9Q1W3 7152 aa4.5□□□□□ -1.69
Smarcc1-201ENSMUST00000088716 Gm10229O08631 77 aa4.35□□□□□ -1.71
Smarcc1-201ENSMUST00000088716 Gm11559Q9D3H7 191 aa4.25□□□□□ -1.73
Smarcc1-201ENSMUST00000088716 Gm11568A2A4M2 211 aa4.19□□□□□ -1.74
Smarcc1-201ENSMUST00000088716 Krtap9-1Q64526 186 aa4.19□□□□□ -1.74
Smarcc1-201ENSMUST00000088716 Phgr1Q8K0G7 91 aa4.07□□□□□ -1.76
Smarcc1-201ENSMUST00000088716 Muc19Q6PZE0 7524 aa4.06□□□□□ -1.76
Smarcc1-201ENSMUST00000088716 Gm11639A0A1D5RLM8 5808 aa3.96□□□□□ -1.78
Smarcc1-201ENSMUST00000088716 Gpr98Q8VHN7 6298 aaKnown RBP3.81□□□□□ -1.8
Smarcc1-201ENSMUST00000088716 Krtap5-2Q9D5Z7 189 aa3.69□□□□□ -1.82
Smarcc1-201ENSMUST00000088716 Hmcn1D3YXG0 5634 aa3.54□□□□□ -1.84
Smarcc1-201ENSMUST00000088716 Krtap6-2O08884 159 aa3.48□□□□□ -1.85
Smarcc1-201ENSMUST00000088716 Gm4553A0A1B0GSA9 284 aa3.47□□□□□ -1.85
Smarcc1-201ENSMUST00000088716 Gm2431E9Q8S1 172 aa3.26□□□□□ -1.89
Smarcc1-201ENSMUST00000088716 Krtap21-1Q925H4 128 aa3.2□□□□□ -1.9
Smarcc1-201ENSMUST00000088716 AhnakE9Q616 5656 aaKnown RBP3.19□□□□□ -1.9
Smarcc1-201ENSMUST00000088716 Gm10153A0A1B0GRL1 320 aa3.1□□□□□ -1.91
Smarcc1-201ENSMUST00000088716 A030005L19RikA0A1Y7VIU2 113 aa3.09□□□□□ -1.91
Smarcc1-201ENSMUST00000088716 Gm45337A0A1B0GS71 263 aa2.94□□□□□ -1.94
Smarcc1-201ENSMUST00000088716 Gm11567Q9D141 195 aa2.92□□□□□ -1.94
Smarcc1-201ENSMUST00000088716 Gm40460A0A1B0GR10 244 aa2.92□□□□□ -1.94
Smarcc1-201ENSMUST00000088716 Gm7579A0A1B0GRJ4 243 aa2.92□□□□□ -1.94
Smarcc1-201ENSMUST00000088716 Krtap5-5Q2TA51 241 aa2.92□□□□□ -1.94
Smarcc1-201ENSMUST00000088716 Krtap5-4Q62220 223 aa2.92□□□□□ -1.94
Smarcc1-201ENSMUST00000088716 A0A1Y7VLE6 161 aa2.88□□□□□ -1.95
Smarcc1-201ENSMUST00000088716 A0A1Y7VJH8 109 aa2.71□□□□□ -1.98
Smarcc1-201ENSMUST00000088716 Gm39115A0A1B0GSH7 232 aa2.69□□□□□ -1.98
Smarcc1-201ENSMUST00000088716 Krtap28-10A0A1Y7VP58 119 aa2.68□□□□□ -1.98
Smarcc1-201ENSMUST00000088716 A030005K14RikA0A1Y7VNY1 122 aa2.65□□□□□ -1.98
Smarcc1-201ENSMUST00000088716 A030003K21RikA0A1Y7VIM3 128 aa2.64□□□□□ -1.99
Smarcc1-201ENSMUST00000088716 Krtap28-13A0A087WQP5 138 aa2.64□□□□□ -1.99
Smarcc1-201ENSMUST00000088716 A0A1Y7VJ07 166 aa2.59□□□□□ -1.99
Smarcc1-201ENSMUST00000088716 Gm7544A0A1Y7VJ58 118 aa2.52□□□□□ -2.01
Smarcc1-201ENSMUST00000088716 Gm6217A0A1Y7VJK9 128 aa2.52□□□□□ -2.01
Smarcc1-201ENSMUST00000088716 A030014E15RikA0A1Y7VJV2 120 aa2.45□□□□□ -2.02
Smarcc1-201ENSMUST00000088716 Gm45618A0A1B0GSA0 219 aa2.24□□□□□ -2.05
Smarcc1-201ENSMUST00000088716 Gm29735A0A1B0GT06 219 aa2.21□□□□□ -2.06
Smarcc1-201ENSMUST00000088716 A0A286YCP9 139 aa1.98□□□□□ -2.09
Smarcc1-201ENSMUST00000088716 Krtap5-1Q64507 230 aa1.82□□□□□ -2.12
Smarcc1-201ENSMUST00000088716 Gm4559A4IF42 199 aa1.15□□□□□ -2.23
Retrieved 80 of 22,080 RNA–protein pairs in 12.1 ms