RNA–Protein interactions for RNA: ENSMUST00000088452.10

Slc38a1-201, Transcript of Sodium-coupled neutral amino acid transporter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Slc38a1, Length 7,266 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a1-201ENSMUST00000088452 Abca13Q5SSE9 5034 aa4.14□□□□□ -1.75
Slc38a1-201ENSMUST00000088452 Krtap4-7Q9D732 168 aa4.14□□□□□ -1.75
Slc38a1-201ENSMUST00000088452 Krtap4-9B1AQA9 244 aa4.14□□□□□ -1.75
Slc38a1-201ENSMUST00000088452 Gm11562A0PK51 136 aa4.12□□□□□ -1.75
Slc38a1-201ENSMUST00000088452 Krtap4-13Q9D7P3 165 aa4.08□□□□□ -1.76
Slc38a1-201ENSMUST00000088452 Hmcn2A2AJ76 5100 aa4.08□□□□□ -1.76
Slc38a1-201ENSMUST00000088452 Lce1kJ3QP15 125 aa4.06□□□□□ -1.76
Slc38a1-201ENSMUST00000088452 Sprr2hO70559 108 aa3.99□□□□□ -1.77
Slc38a1-201ENSMUST00000088452 Gm11938Q9D3H4 131 aa3.99□□□□□ -1.77
Slc38a1-201ENSMUST00000088452 Sprr2dO70555 85 aa3.97□□□□□ -1.77
Slc38a1-201ENSMUST00000088452 ZanO88799 5376 aa3.97□□□□□ -1.77
Slc38a1-201ENSMUST00000088452 Krtap4-16Q91W93 202 aa3.96□□□□□ -1.78
Slc38a1-201ENSMUST00000088452 Ubr4A2AN08 5180 aa3.89□□□□□ -1.79
Slc38a1-201ENSMUST00000088452 Fat4Q2PZL6 4981 aa3.86□□□□□ -1.79
Slc38a1-201ENSMUST00000088452 Mt3P28184 68 aa3.85□□□□□ -1.79
Slc38a1-201ENSMUST00000088452 Mdn1A2ANY6 5589 aaKnown RBP3.84□□□□□ -1.8
Slc38a1-201ENSMUST00000088452 4932415D10RikA0A1W2P6U8 4986 aa3.8□□□□□ -1.8
Slc38a1-201ENSMUST00000088452 Fsip2A2ARZ3 6995 aa3.79□□□□□ -1.8
Slc38a1-201ENSMUST00000088452 Syne2Q6ZWQ0 6874 aaKnown RBP3.78□□□□□ -1.8
Slc38a1-201ENSMUST00000088452 Lce1a1Q9CQH5 143 aa3.77□□□□□ -1.81
Slc38a1-201ENSMUST00000088452 Muc5bE9Q5I3 4800 aa3.75□□□□□ -1.81
Slc38a1-201ENSMUST00000088452 Gm11554B1AQB2 190 aa3.68□□□□□ -1.82
Slc38a1-201ENSMUST00000088452 Rnf213E9Q555 5152 aaKnown RBP3.64□□□□□ -1.83
Slc38a1-201ENSMUST00000088452 Ush2AQ2QI47 5193 aa3.59□□□□□ -1.83
Slc38a1-201ENSMUST00000088452 Krtap6-3A0A087WQL6 57 aa3.56□□□□□ -1.84
Slc38a1-201ENSMUST00000088452 Sprr2bO70554 98 aa3.56□□□□□ -1.84
Slc38a1-201ENSMUST00000088452 Syne1Q6ZWR6 8799 aa3.55□□□□□ -1.84
Slc38a1-201ENSMUST00000088452 Mt1P02802 61 aaKnown RBP3.55□□□□□ -1.84
Slc38a1-201ENSMUST00000088452 Krtap20-2E9Q0A8 60 aa3.49□□□□□ -1.85
Slc38a1-201ENSMUST00000088452 SspoQ8CG65 4998 aa3.44□□□□□ -1.86
Slc38a1-201ENSMUST00000088452 Krtap31-2Q8CAY5 177 aa3.33□□□□□ -1.88
Slc38a1-201ENSMUST00000088452 Gm11555B1AQ89 175 aa2.99□□□□□ -1.93
Slc38a1-201ENSMUST00000088452 ObscnA2AAJ9 8891 aaKnown RBP2.9□□□□□ -1.95
Slc38a1-201ENSMUST00000088452 1110025L11RikO09048 78 aa2.89□□□□□ -1.95
Slc38a1-201ENSMUST00000088452 Krtap6-5Q925H3 78 aa2.89□□□□□ -1.95
Slc38a1-201ENSMUST00000088452 Muc16A0A140LJ72 8478 aa2.85□□□□□ -1.95
Slc38a1-201ENSMUST00000088452 Gm10229O08631 77 aa2.77□□□□□ -1.97
Slc38a1-201ENSMUST00000088452 Gm11568A2A4M2 211 aa2.76□□□□□ -1.97
Slc38a1-201ENSMUST00000088452 Krtap9-1Q64526 186 aa2.76□□□□□ -1.97
Slc38a1-201ENSMUST00000088452 DstQ91ZU6 7393 aaKnown RBP2.73□□□□□ -1.97
Slc38a1-201ENSMUST00000088452 Gm11559Q9D3H7 191 aa2.71□□□□□ -1.98
Slc38a1-201ENSMUST00000088452 Phgr1Q8K0G7 91 aa2.69□□□□□ -1.98
Slc38a1-201ENSMUST00000088452 NebE9Q1W3 7152 aa2.64□□□□□ -1.99
Slc38a1-201ENSMUST00000088452 Macf1Q9QXZ0 7354 aaKnown RBP2.61□□□□□ -1.99
Slc38a1-201ENSMUST00000088452 Muc19Q6PZE0 7524 aa2.57□□□□□ -2
Slc38a1-201ENSMUST00000088452 Eppk1Q8R0W0 6548 aa2.5□□□□□ -2.01
Slc38a1-201ENSMUST00000088452 Kmt2dQ6PDK2 5588 aa2.48□□□□□ -2.01
Slc38a1-201ENSMUST00000088452 Krtap5-2Q9D5Z7 189 aa2.26□□□□□ -2.05
Slc38a1-201ENSMUST00000088452 Krtap6-2O08884 159 aa2.19□□□□□ -2.06
Slc38a1-201ENSMUST00000088452 Gm4553A0A1B0GSA9 284 aa2.1□□□□□ -2.07
Slc38a1-201ENSMUST00000088452 Gm2431E9Q8S1 172 aa2.06□□□□□ -2.08
Slc38a1-201ENSMUST00000088452 Krtap21-1Q925H4 128 aa2.04□□□□□ -2.08
Slc38a1-201ENSMUST00000088452 Hmcn1D3YXG0 5634 aa1.98□□□□□ -2.09
Slc38a1-201ENSMUST00000088452 Gm10153A0A1B0GRL1 320 aa1.94□□□□□ -2.1
Slc38a1-201ENSMUST00000088452 Gm11567Q9D141 195 aa1.94□□□□□ -2.1
Slc38a1-201ENSMUST00000088452 A0A1Y7VLE6 161 aa1.94□□□□□ -2.1
Slc38a1-201ENSMUST00000088452 Gm11639A0A1D5RLM8 5808 aa1.87□□□□□ -2.11
Slc38a1-201ENSMUST00000088452 A030003K21RikA0A1Y7VIM3 128 aa1.81□□□□□ -2.12
Slc38a1-201ENSMUST00000088452 A030005L19RikA0A1Y7VIU2 113 aa1.79□□□□□ -2.12
Slc38a1-201ENSMUST00000088452 Gm45337A0A1B0GS71 263 aa1.77□□□□□ -2.13
Slc38a1-201ENSMUST00000088452 Gpr98Q8VHN7 6298 aaKnown RBP1.71□□□□□ -2.14
Slc38a1-201ENSMUST00000088452 Gm40460A0A1B0GR10 244 aa1.71□□□□□ -2.14
Slc38a1-201ENSMUST00000088452 Gm7579A0A1B0GRJ4 243 aa1.71□□□□□ -2.14
Slc38a1-201ENSMUST00000088452 Krtap5-5Q2TA51 241 aa1.71□□□□□ -2.14
Slc38a1-201ENSMUST00000088452 Krtap5-4Q62220 223 aa1.71□□□□□ -2.14
Slc38a1-201ENSMUST00000088452 AhnakE9Q616 5656 aaKnown RBP1.65□□□□□ -2.15
Slc38a1-201ENSMUST00000088452 Gm6217A0A1Y7VJK9 128 aa1.64□□□□□ -2.15
Slc38a1-201ENSMUST00000088452 A0A286YCP9 139 aa1.61□□□□□ -2.15
Slc38a1-201ENSMUST00000088452 Gm39115A0A1B0GSH7 232 aa1.6□□□□□ -2.15
Slc38a1-201ENSMUST00000088452 A0A1Y7VJH8 109 aa1.53□□□□□ -2.17
Slc38a1-201ENSMUST00000088452 A0A1Y7VJ07 166 aa1.5□□□□□ -2.17
Slc38a1-201ENSMUST00000088452 Krtap28-13A0A087WQP5 138 aa1.48□□□□□ -2.17
Slc38a1-201ENSMUST00000088452 Gm7544A0A1Y7VJ58 118 aa1.41□□□□□ -2.18
Slc38a1-201ENSMUST00000088452 Krtap28-10A0A1Y7VP58 119 aa1.4□□□□□ -2.18
Slc38a1-201ENSMUST00000088452 A030014E15RikA0A1Y7VJV2 120 aa1.39□□□□□ -2.19
Slc38a1-201ENSMUST00000088452 A030005K14RikA0A1Y7VNY1 122 aa1.31□□□□□ -2.2
Slc38a1-201ENSMUST00000088452 Gm29735A0A1B0GT06 219 aa1.27□□□□□ -2.21
Slc38a1-201ENSMUST00000088452 Gm45618A0A1B0GSA0 219 aa1.24□□□□□ -2.21
Slc38a1-201ENSMUST00000088452 Krtap5-1Q64507 230 aa1.21□□□□□ -2.22
Slc38a1-201ENSMUST00000088452 Gm4559A4IF42 199 aa0.69□□□□□ -2.3
Retrieved 80 of 22,080 RNA–protein pairs in 6.4 ms