RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Gm11564A2A4L9 201 aa4.94□□□□□ -1.62
Col18a1-202ENSMUST00000081654 Gm11563B1AQ90 168 aa4.94□□□□□ -1.62
Col18a1-202ENSMUST00000081654 Gm11595B1AQA7 289 aa4.94□□□□□ -1.62
Col18a1-202ENSMUST00000081654 Krtap4-8B1AQA8 209 aa4.94□□□□□ -1.62
Col18a1-202ENSMUST00000081654 Krtap4-9B1AQA9 244 aa4.89□□□□□ -1.63
Col18a1-202ENSMUST00000081654 2300003K06RikA2A4M0 262 aa4.89□□□□□ -1.63
Col18a1-202ENSMUST00000081654 Rnf213E9Q555 5152 aaKnown RBP4.88□□□□□ -1.63
Col18a1-202ENSMUST00000081654 Sprr2dO70555 85 aa4.86□□□□□ -1.63
Col18a1-202ENSMUST00000081654 Hmcn2A2AJ76 5100 aa4.86□□□□□ -1.63
Col18a1-202ENSMUST00000081654 Krtap17-1A2A5X6 109 aa4.85□□□□□ -1.63
Col18a1-202ENSMUST00000081654 Gm11562A0PK51 136 aa4.84□□□□□ -1.63
Col18a1-202ENSMUST00000081654 Ush2AQ2QI47 5193 aa4.84□□□□□ -1.63
Col18a1-202ENSMUST00000081654 Krtap4-7Q9D732 168 aa4.84□□□□□ -1.64
Col18a1-202ENSMUST00000081654 Sprr2hO70559 108 aa4.8□□□□□ -1.64
Col18a1-202ENSMUST00000081654 Gm11938Q9D3H4 131 aa4.79□□□□□ -1.64
Col18a1-202ENSMUST00000081654 Syne1Q6ZWR6 8799 aa4.79□□□□□ -1.64
Col18a1-202ENSMUST00000081654 Krtap4-13Q9D7P3 165 aa4.75□□□□□ -1.65
Col18a1-202ENSMUST00000081654 Lce1kJ3QP15 125 aa4.72□□□□□ -1.65
Col18a1-202ENSMUST00000081654 Krtap31-1Q9D644 177 aa4.67□□□□□ -1.66
Col18a1-202ENSMUST00000081654 Mt3P28184 68 aa4.61□□□□□ -1.67
Col18a1-202ENSMUST00000081654 Syne2Q6ZWQ0 6874 aaKnown RBP4.61□□□□□ -1.67
Col18a1-202ENSMUST00000081654 Fsip2A2ARZ3 6995 aa4.61□□□□□ -1.67
Col18a1-202ENSMUST00000081654 SspoQ8CG65 4998 aa4.59□□□□□ -1.67
Col18a1-202ENSMUST00000081654 Krtap6-3A0A087WQL6 57 aa4.48□□□□□ -1.69
Col18a1-202ENSMUST00000081654 Lce1a1Q9CQH5 143 aa4.43□□□□□ -1.7
Col18a1-202ENSMUST00000081654 Mt1P02802 61 aaKnown RBP4.3□□□□□ -1.72
Col18a1-202ENSMUST00000081654 Gm11554B1AQB2 190 aa4.23□□□□□ -1.73
Col18a1-202ENSMUST00000081654 Krtap4-16Q91W93 202 aa4.2□□□□□ -1.74
Col18a1-202ENSMUST00000081654 Krtap20-2E9Q0A8 60 aa4.17□□□□□ -1.74
Col18a1-202ENSMUST00000081654 ObscnA2AAJ9 8891 aaKnown RBP4.09□□□□□ -1.75
Col18a1-202ENSMUST00000081654 Eppk1Q8R0W0 6548 aa4.02□□□□□ -1.77
Col18a1-202ENSMUST00000081654 Muc16A0A140LJ72 8478 aa4□□□□□ -1.77
Col18a1-202ENSMUST00000081654 Gm11555B1AQ89 175 aa3.94□□□□□ -1.78
Col18a1-202ENSMUST00000081654 Sprr2bO70554 98 aa3.94□□□□□ -1.78
Col18a1-202ENSMUST00000081654 Kmt2dQ6PDK2 5588 aa3.79□□□□□ -1.8
Col18a1-202ENSMUST00000081654 Macf1Q9QXZ0 7354 aaKnown RBP3.79□□□□□ -1.8
Col18a1-202ENSMUST00000081654 DstQ91ZU6 7393 aaKnown RBP3.73□□□□□ -1.81
Col18a1-202ENSMUST00000081654 NebE9Q1W3 7152 aa3.62□□□□□ -1.83
Col18a1-202ENSMUST00000081654 Krtap31-2Q8CAY5 177 aa3.55□□□□□ -1.84
Col18a1-202ENSMUST00000081654 1110025L11RikO09048 78 aa3.51□□□□□ -1.85
Col18a1-202ENSMUST00000081654 Krtap6-5Q925H3 78 aa3.51□□□□□ -1.85
Col18a1-202ENSMUST00000081654 Gm11559Q9D3H7 191 aa3.42□□□□□ -1.86
Col18a1-202ENSMUST00000081654 Gm11568A2A4M2 211 aa3.38□□□□□ -1.87
Col18a1-202ENSMUST00000081654 Krtap9-1Q64526 186 aa3.38□□□□□ -1.87
Col18a1-202ENSMUST00000081654 Gm10229O08631 77 aa3.31□□□□□ -1.88
Col18a1-202ENSMUST00000081654 Gm11639A0A1D5RLM8 5808 aa3.28□□□□□ -1.88
Col18a1-202ENSMUST00000081654 Muc19Q6PZE0 7524 aa3.27□□□□□ -1.89
Col18a1-202ENSMUST00000081654 Gpr98Q8VHN7 6298 aaKnown RBP3.18□□□□□ -1.9
Col18a1-202ENSMUST00000081654 Krtap5-2Q9D5Z7 189 aa3.11□□□□□ -1.91
Col18a1-202ENSMUST00000081654 Hmcn1D3YXG0 5634 aa3□□□□□ -1.93
Col18a1-202ENSMUST00000081654 Phgr1Q8K0G7 91 aa2.99□□□□□ -1.93
Col18a1-202ENSMUST00000081654 Gm4553A0A1B0GSA9 284 aa2.93□□□□□ -1.94
Col18a1-202ENSMUST00000081654 Gm2431E9Q8S1 172 aa2.73□□□□□ -1.97
Col18a1-202ENSMUST00000081654 AhnakE9Q616 5656 aaKnown RBP2.72□□□□□ -1.97
Col18a1-202ENSMUST00000081654 A030005L19RikA0A1Y7VIU2 113 aa2.68□□□□□ -1.98
Col18a1-202ENSMUST00000081654 Krtap6-2O08884 159 aa2.68□□□□□ -1.98
Col18a1-202ENSMUST00000081654 Gm10153A0A1B0GRL1 320 aa2.65□□□□□ -1.99
Col18a1-202ENSMUST00000081654 Gm45337A0A1B0GS71 263 aa2.56□□□□□ -2
Col18a1-202ENSMUST00000081654 Gm40460A0A1B0GR10 244 aa2.54□□□□□ -2
Col18a1-202ENSMUST00000081654 Gm7579A0A1B0GRJ4 243 aa2.54□□□□□ -2
Col18a1-202ENSMUST00000081654 Krtap5-5Q2TA51 241 aa2.54□□□□□ -2
Col18a1-202ENSMUST00000081654 Krtap5-4Q62220 223 aa2.54□□□□□ -2
Col18a1-202ENSMUST00000081654 Krtap21-1Q925H4 128 aa2.5□□□□□ -2.01
Col18a1-202ENSMUST00000081654 A0A1Y7VJH8 109 aa2.4□□□□□ -2.03
Col18a1-202ENSMUST00000081654 Gm39115A0A1B0GSH7 232 aa2.35□□□□□ -2.03
Col18a1-202ENSMUST00000081654 Gm11567Q9D141 195 aa2.13□□□□□ -2.07
Col18a1-202ENSMUST00000081654 Gm45618A0A1B0GSA0 219 aa2.01□□□□□ -2.09
Col18a1-202ENSMUST00000081654 A0A1Y7VLE6 161 aa1.95□□□□□ -2.1
Col18a1-202ENSMUST00000081654 Gm29735A0A1B0GT06 219 aa1.92□□□□□ -2.1
Col18a1-202ENSMUST00000081654 A0A286YCP9 139 aa1.66□□□□□ -2.14
Col18a1-202ENSMUST00000081654 Krtap28-13A0A087WQP5 138 aa1.64□□□□□ -2.15
Col18a1-202ENSMUST00000081654 A0A1Y7VJ07 166 aa1.49□□□□□ -2.17
Col18a1-202ENSMUST00000081654 Krtap5-1Q64507 230 aa1.48□□□□□ -2.17
Col18a1-202ENSMUST00000081654 A030014E15RikA0A1Y7VJV2 120 aa1.31□□□□□ -2.2
Col18a1-202ENSMUST00000081654 A030005K14RikA0A1Y7VNY1 122 aa1.24□□□□□ -2.21
Col18a1-202ENSMUST00000081654 Krtap28-10A0A1Y7VP58 119 aa1.24□□□□□ -2.21
Col18a1-202ENSMUST00000081654 Gm7544A0A1Y7VJ58 118 aa1.2□□□□□ -2.22
Col18a1-202ENSMUST00000081654 A030003K21RikA0A1Y7VIM3 128 aa0.98□□□□□ -2.25
Col18a1-202ENSMUST00000081654 Gm6217A0A1Y7VJK9 128 aa0.98□□□□□ -2.25
Col18a1-202ENSMUST00000081654 Gm4559A4IF42 199 aa0.98□□□□□ -2.25
Retrieved 80 of 22,080 RNA–protein pairs in 6.3 ms