RNA–Protein interactions for RNA: ENSMUST00000071370.6

Pcdh17-201, Transcript of Protocadherin 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh17, Length 11,451 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17-201ENSMUST00000071370 Krtap4-7Q9D732 168 aa2.23□□□□□ -2.05
Pcdh17-201ENSMUST00000071370 Gm11596B1AQB0 205 aa2.22□□□□□ -2.05
Pcdh17-201ENSMUST00000071370 Ubr4A2AN08 5180 aa2.22□□□□□ -2.05
Pcdh17-201ENSMUST00000071370 Lce1a1Q9CQH5 143 aa2.21□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Lce1a2Q9D1K4 149 aa2.21□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 2300003K06RikA2A4M0 262 aa2.21□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Krtap4-1Q3UUY3 169 aa2.2□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Fat4Q2PZL6 4981 aa2.2□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Krtap17-1A2A5X6 109 aa2.19□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 ZanO88799 5376 aa2.19□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Gm11564A2A4L9 201 aa2.17□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Gm11563B1AQ90 168 aa2.17□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Gm11595B1AQA7 289 aa2.17□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Krtap4-8B1AQA8 209 aa2.17□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Hmcn2A2AJ76 5100 aa2.16□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Krtap4-9B1AQA9 244 aa2.16□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Mt3P28184 68 aa2.16□□□□□ -2.06
Pcdh17-201ENSMUST00000071370 Muc5bE9Q5I3 4800 aa2.14□□□□□ -2.07
Pcdh17-201ENSMUST00000071370 Krtap4-13Q9D7P3 165 aa2.13□□□□□ -2.07
Pcdh17-201ENSMUST00000071370 Ush2AQ2QI47 5193 aa2.12□□□□□ -2.07
Pcdh17-201ENSMUST00000071370 Lce1kJ3QP15 125 aa2.11□□□□□ -2.07
Pcdh17-201ENSMUST00000071370 SspoQ8CG65 4998 aa2.11□□□□□ -2.07
Pcdh17-201ENSMUST00000071370 A0A1Y7VLE6 161 aa2.1□□□□□ -2.07
Pcdh17-201ENSMUST00000071370 Mt1P02802 61 aaKnown RBP2.1□□□□□ -2.07
Pcdh17-201ENSMUST00000071370 Syne1Q6ZWR6 8799 aa2.05□□□□□ -2.08
Pcdh17-201ENSMUST00000071370 Fsip2A2ARZ3 6995 aa2.02□□□□□ -2.09
Pcdh17-201ENSMUST00000071370 Krtap4-16Q91W93 202 aa2□□□□□ -2.09
Pcdh17-201ENSMUST00000071370 Krtap6-3A0A087WQL6 57 aa1.99□□□□□ -2.09
Pcdh17-201ENSMUST00000071370 Gm11554B1AQB2 190 aa1.95□□□□□ -2.1
Pcdh17-201ENSMUST00000071370 Mdn1A2ANY6 5589 aaKnown RBP1.91□□□□□ -2.1
Pcdh17-201ENSMUST00000071370 A030003K21RikA0A1Y7VIM3 128 aa1.87□□□□□ -2.11
Pcdh17-201ENSMUST00000071370 Krtap28-10A0A1Y7VP58 119 aa1.82□□□□□ -2.12
Pcdh17-201ENSMUST00000071370 Syne2Q6ZWQ0 6874 aaKnown RBP1.82□□□□□ -2.12
Pcdh17-201ENSMUST00000071370 ObscnA2AAJ9 8891 aaKnown RBP1.8□□□□□ -2.12
Pcdh17-201ENSMUST00000071370 Krtap28-13A0A087WQP5 138 aa1.79□□□□□ -2.12
Pcdh17-201ENSMUST00000071370 Krtap20-2E9Q0A8 60 aa1.78□□□□□ -2.12
Pcdh17-201ENSMUST00000071370 A0A1Y7VJ07 166 aa1.78□□□□□ -2.13
Pcdh17-201ENSMUST00000071370 Gm7544A0A1Y7VJ58 118 aa1.77□□□□□ -2.13
Pcdh17-201ENSMUST00000071370 A0A1Y7VJH8 109 aa1.76□□□□□ -2.13
Pcdh17-201ENSMUST00000071370 Gm6217A0A1Y7VJK9 128 aa1.74□□□□□ -2.13
Pcdh17-201ENSMUST00000071370 A030005K14RikA0A1Y7VNY1 122 aa1.73□□□□□ -2.13
Pcdh17-201ENSMUST00000071370 Eppk1Q8R0W0 6548 aa1.72□□□□□ -2.13
Pcdh17-201ENSMUST00000071370 A030005L19RikA0A1Y7VIU2 113 aa1.7□□□□□ -2.14
Pcdh17-201ENSMUST00000071370 Gm11555B1AQ89 175 aa1.66□□□□□ -2.14
Pcdh17-201ENSMUST00000071370 A030014E15RikA0A1Y7VJV2 120 aa1.66□□□□□ -2.14
Pcdh17-201ENSMUST00000071370 1110025L11RikO09048 78 aa1.6□□□□□ -2.15
Pcdh17-201ENSMUST00000071370 Krtap6-5Q925H3 78 aa1.6□□□□□ -2.15
Pcdh17-201ENSMUST00000071370 Muc16A0A140LJ72 8478 aa1.51□□□□□ -2.17
Pcdh17-201ENSMUST00000071370 Gm10229O08631 77 aa1.5□□□□□ -2.17
Pcdh17-201ENSMUST00000071370 NebE9Q1W3 7152 aa1.5□□□□□ -2.17
Pcdh17-201ENSMUST00000071370 Kmt2dQ6PDK2 5588 aa1.49□□□□□ -2.17
Pcdh17-201ENSMUST00000071370 DstQ91ZU6 7393 aaKnown RBP1.48□□□□□ -2.17
Pcdh17-201ENSMUST00000071370 Macf1Q9QXZ0 7354 aaKnown RBP1.47□□□□□ -2.17
Pcdh17-201ENSMUST00000071370 Phgr1Q8K0G7 91 aa1.45□□□□□ -2.18
Pcdh17-201ENSMUST00000071370 Gm11639A0A1D5RLM8 5808 aa1.41□□□□□ -2.18
Pcdh17-201ENSMUST00000071370 Gm11559Q9D3H7 191 aa1.39□□□□□ -2.19
Pcdh17-201ENSMUST00000071370 Gm11568A2A4M2 211 aa1.35□□□□□ -2.19
Pcdh17-201ENSMUST00000071370 Hmcn1D3YXG0 5634 aa1.35□□□□□ -2.19
Pcdh17-201ENSMUST00000071370 Gpr98Q8VHN7 6298 aaKnown RBP1.33□□□□□ -2.2
Pcdh17-201ENSMUST00000071370 Krtap5-2Q9D5Z7 189 aa1.3□□□□□ -2.2
Pcdh17-201ENSMUST00000071370 A0A286YCP9 139 aa1.29□□□□□ -2.2
Pcdh17-201ENSMUST00000071370 Krtap9-1Q64526 186 aa1.28□□□□□ -2.2
Pcdh17-201ENSMUST00000071370 AhnakE9Q616 5656 aaKnown RBP1.24□□□□□ -2.21
Pcdh17-201ENSMUST00000071370 Gm10153A0A1B0GRL1 320 aa1.23□□□□□ -2.21
Pcdh17-201ENSMUST00000071370 Muc19Q6PZE0 7524 aa1.22□□□□□ -2.21
Pcdh17-201ENSMUST00000071370 Gm40460A0A1B0GR10 244 aa1.19□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Gm7579A0A1B0GRJ4 243 aa1.19□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Gm4553A0A1B0GSA9 284 aa1.19□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Krtap5-5Q2TA51 241 aa1.19□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Krtap5-4Q62220 223 aa1.19□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Krtap6-2O08884 159 aa1.17□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Krtap21-1Q925H4 128 aa1.17□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Gm45337A0A1B0GS71 263 aa1.17□□□□□ -2.22
Pcdh17-201ENSMUST00000071370 Gm11567Q9D141 195 aa1.15□□□□□ -2.23
Pcdh17-201ENSMUST00000071370 Gm2431E9Q8S1 172 aa1.12□□□□□ -2.23
Pcdh17-201ENSMUST00000071370 Gm39115A0A1B0GSH7 232 aa1.03□□□□□ -2.24
Pcdh17-201ENSMUST00000071370 Gm29735A0A1B0GT06 219 aa0.91□□□□□ -2.26
Pcdh17-201ENSMUST00000071370 Gm45618A0A1B0GSA0 219 aa0.89□□□□□ -2.27
Pcdh17-201ENSMUST00000071370 Krtap5-1Q64507 230 aa0.65□□□□□ -2.31
Pcdh17-201ENSMUST00000071370 Gm4559A4IF42 199 aa0.51□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 11.4 ms