RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Sprr2hO70559 108 aa4.51□□□□□ -1.69
Atg4d-201ENSMUST00000065005 Krtap4-9B1AQA9 244 aa4.5□□□□□ -1.69
Atg4d-201ENSMUST00000065005 Krtap31-1Q9D644 177 aa4.49□□□□□ -1.69
Atg4d-201ENSMUST00000065005 Gm11938Q9D3H4 131 aa4.43□□□□□ -1.7
Atg4d-201ENSMUST00000065005 Sprr2dO70555 85 aa4.42□□□□□ -1.7
Atg4d-201ENSMUST00000065005 Krtap4-13Q9D7P3 165 aa4.42□□□□□ -1.7
Atg4d-201ENSMUST00000065005 Lce1kJ3QP15 125 aa4.41□□□□□ -1.7
Atg4d-201ENSMUST00000065005 Mdn1A2ANY6 5589 aaKnown RBP4.39□□□□□ -1.71
Atg4d-201ENSMUST00000065005 Mt3P28184 68 aa4.33□□□□□ -1.72
Atg4d-201ENSMUST00000065005 Krtap17-1A2A5X6 109 aa4.3□□□□□ -1.72
Atg4d-201ENSMUST00000065005 4932415D10RikA0A1W2P6U8 4986 aa4.3□□□□□ -1.72
Atg4d-201ENSMUST00000065005 Muc5bE9Q5I3 4800 aa4.23□□□□□ -1.73
Atg4d-201ENSMUST00000065005 Ubr4A2AN08 5180 aa4.21□□□□□ -1.74
Atg4d-201ENSMUST00000065005 Fat4Q2PZL6 4981 aa4.17□□□□□ -1.74
Atg4d-201ENSMUST00000065005 Lce1a1Q9CQH5 143 aa4.17□□□□□ -1.74
Atg4d-201ENSMUST00000065005 ZanO88799 5376 aa4.16□□□□□ -1.74
Atg4d-201ENSMUST00000065005 Krtap4-16Q91W93 202 aa4.12□□□□□ -1.75
Atg4d-201ENSMUST00000065005 Hmcn2A2AJ76 5100 aa4.12□□□□□ -1.75
Atg4d-201ENSMUST00000065005 Syne1Q6ZWR6 8799 aa4.1□□□□□ -1.75
Atg4d-201ENSMUST00000065005 Sprr2bO70554 98 aa4.09□□□□□ -1.75
Atg4d-201ENSMUST00000065005 Fsip2A2ARZ3 6995 aa4.07□□□□□ -1.76
Atg4d-201ENSMUST00000065005 Syne2Q6ZWQ0 6874 aaKnown RBP4.07□□□□□ -1.76
Atg4d-201ENSMUST00000065005 Krtap6-3A0A087WQL6 57 aa4.04□□□□□ -1.76
Atg4d-201ENSMUST00000065005 Gm11554B1AQB2 190 aa4.03□□□□□ -1.76
Atg4d-201ENSMUST00000065005 Abca13Q5SSE9 5034 aa4.01□□□□□ -1.77
Atg4d-201ENSMUST00000065005 Rnf213E9Q555 5152 aaKnown RBP3.92□□□□□ -1.78
Atg4d-201ENSMUST00000065005 Krtap31-2Q8CAY5 177 aa3.91□□□□□ -1.78
Atg4d-201ENSMUST00000065005 Mt1P02802 61 aaKnown RBP3.83□□□□□ -1.8
Atg4d-201ENSMUST00000065005 Krtap20-2E9Q0A8 60 aa3.78□□□□□ -1.8
Atg4d-201ENSMUST00000065005 Ush2AQ2QI47 5193 aa3.73□□□□□ -1.81
Atg4d-201ENSMUST00000065005 SspoQ8CG65 4998 aa3.73□□□□□ -1.81
Atg4d-201ENSMUST00000065005 ObscnA2AAJ9 8891 aaKnown RBP3.43□□□□□ -1.86
Atg4d-201ENSMUST00000065005 Eppk1Q8R0W0 6548 aa3.4□□□□□ -1.86
Atg4d-201ENSMUST00000065005 Muc16A0A140LJ72 8478 aa3.32□□□□□ -1.88
Atg4d-201ENSMUST00000065005 DstQ91ZU6 7393 aaKnown RBP3.21□□□□□ -1.9
Atg4d-201ENSMUST00000065005 Gm11555B1AQ89 175 aa3.19□□□□□ -1.9
Atg4d-201ENSMUST00000065005 1110025L11RikO09048 78 aa3.19□□□□□ -1.9
Atg4d-201ENSMUST00000065005 Krtap6-5Q925H3 78 aa3.19□□□□□ -1.9
Atg4d-201ENSMUST00000065005 Kmt2dQ6PDK2 5588 aa3.17□□□□□ -1.9
Atg4d-201ENSMUST00000065005 NebE9Q1W3 7152 aa3.15□□□□□ -1.91
Atg4d-201ENSMUST00000065005 Macf1Q9QXZ0 7354 aaKnown RBP3.08□□□□□ -1.92
Atg4d-201ENSMUST00000065005 Gm10229O08631 77 aa3.07□□□□□ -1.92
Atg4d-201ENSMUST00000065005 Gm11559Q9D3H7 191 aa2.96□□□□□ -1.94
Atg4d-201ENSMUST00000065005 Phgr1Q8K0G7 91 aa2.9□□□□□ -1.94
Atg4d-201ENSMUST00000065005 Gm11568A2A4M2 211 aa2.86□□□□□ -1.95
Atg4d-201ENSMUST00000065005 Krtap9-1Q64526 186 aa2.86□□□□□ -1.95
Atg4d-201ENSMUST00000065005 Muc19Q6PZE0 7524 aa2.8□□□□□ -1.96
Atg4d-201ENSMUST00000065005 Gm11639A0A1D5RLM8 5808 aa2.61□□□□□ -1.99
Atg4d-201ENSMUST00000065005 Gpr98Q8VHN7 6298 aaKnown RBP2.46□□□□□ -2.02
Atg4d-201ENSMUST00000065005 Krtap6-2O08884 159 aa2.43□□□□□ -2.02
Atg4d-201ENSMUST00000065005 Krtap5-2Q9D5Z7 189 aa2.41□□□□□ -2.02
Atg4d-201ENSMUST00000065005 Gm4553A0A1B0GSA9 284 aa2.27□□□□□ -2.05
Atg4d-201ENSMUST00000065005 Hmcn1D3YXG0 5634 aa2.27□□□□□ -2.05
Atg4d-201ENSMUST00000065005 Krtap21-1Q925H4 128 aa2.18□□□□□ -2.06
Atg4d-201ENSMUST00000065005 Gm2431E9Q8S1 172 aa2.16□□□□□ -2.06
Atg4d-201ENSMUST00000065005 Gm11567Q9D141 195 aa2.16□□□□□ -2.06
Atg4d-201ENSMUST00000065005 AhnakE9Q616 5656 aaKnown RBP2.06□□□□□ -2.08
Atg4d-201ENSMUST00000065005 A030005L19RikA0A1Y7VIU2 113 aa2.03□□□□□ -2.08
Atg4d-201ENSMUST00000065005 Gm10153A0A1B0GRL1 320 aa1.97□□□□□ -2.09
Atg4d-201ENSMUST00000065005 Gm45337A0A1B0GS71 263 aa1.85□□□□□ -2.11
Atg4d-201ENSMUST00000065005 Gm40460A0A1B0GR10 244 aa1.83□□□□□ -2.12
Atg4d-201ENSMUST00000065005 Gm7579A0A1B0GRJ4 243 aa1.83□□□□□ -2.12
Atg4d-201ENSMUST00000065005 Krtap5-5Q2TA51 241 aa1.83□□□□□ -2.12
Atg4d-201ENSMUST00000065005 Krtap5-4Q62220 223 aa1.83□□□□□ -2.12
Atg4d-201ENSMUST00000065005 Gm39115A0A1B0GSH7 232 aa1.71□□□□□ -2.14
Atg4d-201ENSMUST00000065005 A0A1Y7VJH8 109 aa1.47□□□□□ -2.17
Atg4d-201ENSMUST00000065005 Gm45618A0A1B0GSA0 219 aa1.39□□□□□ -2.19
Atg4d-201ENSMUST00000065005 Gm29735A0A1B0GT06 219 aa1.38□□□□□ -2.19
Atg4d-201ENSMUST00000065005 Krtap5-1Q64507 230 aa1.28□□□□□ -2.2
Atg4d-201ENSMUST00000065005 A0A1Y7VLE6 161 aa1.22□□□□□ -2.21
Atg4d-201ENSMUST00000065005 A030005K14RikA0A1Y7VNY1 122 aa0.98□□□□□ -2.25
Atg4d-201ENSMUST00000065005 A0A286YCP9 139 aa0.97□□□□□ -2.25
Atg4d-201ENSMUST00000065005 Krtap28-10A0A1Y7VP58 119 aa0.95□□□□□ -2.26
Atg4d-201ENSMUST00000065005 A030014E15RikA0A1Y7VJV2 120 aa0.93□□□□□ -2.26
Atg4d-201ENSMUST00000065005 Krtap28-13A0A087WQP5 138 aa0.93□□□□□ -2.26
Atg4d-201ENSMUST00000065005 A0A1Y7VJ07 166 aa0.93□□□□□ -2.26
Atg4d-201ENSMUST00000065005 A030003K21RikA0A1Y7VIM3 128 aa0.87□□□□□ -2.27
Atg4d-201ENSMUST00000065005 Gm7544A0A1Y7VJ58 118 aa0.86□□□□□ -2.27
Atg4d-201ENSMUST00000065005 Gm6217A0A1Y7VJK9 128 aa0.82□□□□□ -2.28
Atg4d-201ENSMUST00000065005 Gm4559A4IF42 199 aa0.76□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 157.3 ms