RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Krtap4-9B1AQA9 244 aa5.88□□□□□ -1.47
Ttc39b-202ENSMUST00000048274 Mt2P02798 61 aa5.87□□□□□ -1.47
Ttc39b-202ENSMUST00000048274 Gm6358A0A087WPH4 74 aa5.85□□□□□ -1.47
Ttc39b-202ENSMUST00000048274 Sprr2gO70558 76 aa5.79□□□□□ -1.48
Ttc39b-202ENSMUST00000048274 Fsip2A2ARZ3 6995 aa5.77□□□□□ -1.48
Ttc39b-202ENSMUST00000048274 Krtap6-3A0A087WQL6 57 aa5.76□□□□□ -1.49
Ttc39b-202ENSMUST00000048274 Mt4P47945 62 aa5.73□□□□□ -1.49
Ttc39b-202ENSMUST00000048274 Sprr2dO70555 85 aa5.71□□□□□ -1.49
Ttc39b-202ENSMUST00000048274 4933428G20RikQ9D3X4 101 aa5.71□□□□□ -1.49
Ttc39b-202ENSMUST00000048274 A0A286YCP9 139 aa5.7□□□□□ -1.5
Ttc39b-202ENSMUST00000048274 Lce1bQ9D149 137 aa5.67□□□□□ -1.5
Ttc39b-202ENSMUST00000048274 Krtap4-13Q9D7P3 165 aa5.67□□□□□ -1.5
Ttc39b-202ENSMUST00000048274 Gm6217A0A1Y7VJK9 128 aa5.62□□□□□ -1.51
Ttc39b-202ENSMUST00000048274 Gm11938Q9D3H4 131 aa5.62□□□□□ -1.51
Ttc39b-202ENSMUST00000048274 Lce1eQ9D139 143 aa5.59□□□□□ -1.51
Ttc39b-202ENSMUST00000048274 Krtap22-2J3QNX6 67 aa5.53□□□□□ -1.52
Ttc39b-202ENSMUST00000048274 Sprr2kO70562 68 aa5.49□□□□□ -1.53
Ttc39b-202ENSMUST00000048274 Gm10272F7CZ33 110 aa5.44□□□□□ -1.54
Ttc39b-202ENSMUST00000048274 2300003K06RikA2A4M0 262 aa5.37□□□□□ -1.55
Ttc39b-202ENSMUST00000048274 Gm11559Q9D3H7 191 aa5.37□□□□□ -1.55
Ttc39b-202ENSMUST00000048274 Krtap19-4Q925H7 84 aa5.31□□□□□ -1.56
Ttc39b-202ENSMUST00000048274 Krtap20-2E9Q0A8 60 aa5.27□□□□□ -1.57
Ttc39b-202ENSMUST00000048274 Krtap31-1Q9D644 177 aa5.27□□□□□ -1.57
Ttc39b-202ENSMUST00000048274 Lce1cQ9D1C5 147 aa5.26□□□□□ -1.57
Ttc39b-202ENSMUST00000048274 Lce1kJ3QP15 125 aa5.21□□□□□ -1.58
Ttc39b-202ENSMUST00000048274 Gm10100J3QK64 120 aa5.13□□□□□ -1.59
Ttc39b-202ENSMUST00000048274 Lce3bQ9CQM7 98 aa5.11□□□□□ -1.59
Ttc39b-202ENSMUST00000048274 Sprr2iO70560 76 aa5.09□□□□□ -1.6
Ttc39b-202ENSMUST00000048274 Lce1fB9EJP6 147 aa5.07□□□□□ -1.6
Ttc39b-202ENSMUST00000048274 Gm10142J3KMP7 120 aa5.05□□□□□ -1.6
Ttc39b-202ENSMUST00000048274 Eppk1Q8R0W0 6548 aa5.02□□□□□ -1.61
Ttc39b-202ENSMUST00000048274 Sprr2hO70559 108 aa4.97□□□□□ -1.61
Ttc39b-202ENSMUST00000048274 Sprr2eO70556 76 aa4.93□□□□□ -1.62
Ttc39b-202ENSMUST00000048274 Lce3cQ91V05 98 aa4.88□□□□□ -1.63
Ttc39b-202ENSMUST00000048274 Lce3dE9Q8V1 98 aa4.86□□□□□ -1.63
Ttc39b-202ENSMUST00000048274 Gm11567Q9D141 195 aa4.84□□□□□ -1.63
Ttc39b-202ENSMUST00000048274 Gm2431E9Q8S1 172 aa4.82□□□□□ -1.64
Ttc39b-202ENSMUST00000048274 Syne1Q6ZWR6 8799 aa4.81□□□□□ -1.64
Ttc39b-202ENSMUST00000048274 Sprr2fO70557 76 aa4.81□□□□□ -1.64
Ttc39b-202ENSMUST00000048274 Lce3eF8VQJ0 98 aa4.77□□□□□ -1.65
Ttc39b-202ENSMUST00000048274 Lce3fQ6PAI4 98 aa4.77□□□□□ -1.65
Ttc39b-202ENSMUST00000048274 Gm11554B1AQB2 190 aa4.76□□□□□ -1.65
Ttc39b-202ENSMUST00000048274 Gm11639A0A1D5RLM8 5808 aa4.75□□□□□ -1.65
Ttc39b-202ENSMUST00000048274 Gm39115A0A1B0GSH7 232 aa4.72□□□□□ -1.65
Ttc39b-202ENSMUST00000048274 Krtap5-2Q9D5Z7 189 aa4.72□□□□□ -1.65
Ttc39b-202ENSMUST00000048274 Gm45618A0A1B0GSA0 219 aa4.71□□□□□ -1.66
Ttc39b-202ENSMUST00000048274 Lce3aQ497I5 98 aa4.69□□□□□ -1.66
Ttc39b-202ENSMUST00000048274 Macf1Q9QXZ0 7354 aaKnown RBP4.63□□□□□ -1.67
Ttc39b-202ENSMUST00000048274 ObscnA2AAJ9 8891 aaKnown RBP4.63□□□□□ -1.67
Ttc39b-202ENSMUST00000048274 Kmt2dQ6PDK2 5588 aa4.6□□□□□ -1.67
Ttc39b-202ENSMUST00000048274 Gm29735A0A1B0GT06 219 aa4.58□□□□□ -1.68
Ttc39b-202ENSMUST00000048274 Gm4553A0A1B0GSA9 284 aa4.57□□□□□ -1.68
Ttc39b-202ENSMUST00000048274 Gpr98Q8VHN7 6298 aaKnown RBP4.57□□□□□ -1.68
Ttc39b-202ENSMUST00000048274 Mt1P02802 61 aaKnown RBP4.51□□□□□ -1.69
Ttc39b-202ENSMUST00000048274 Muc19Q6PZE0 7524 aa4.45□□□□□ -1.7
Ttc39b-202ENSMUST00000048274 Gm11568A2A4M2 211 aa4.42□□□□□ -1.7
Ttc39b-202ENSMUST00000048274 Krtap9-1Q64526 186 aa4.42□□□□□ -1.7
Ttc39b-202ENSMUST00000048274 Gm45337A0A1B0GS71 263 aa4.32□□□□□ -1.72
Ttc39b-202ENSMUST00000048274 Krtap4-16Q91W93 202 aa4.25□□□□□ -1.73
Ttc39b-202ENSMUST00000048274 Hmcn1D3YXG0 5634 aa4.18□□□□□ -1.74
Ttc39b-202ENSMUST00000048274 Gm40460A0A1B0GR10 244 aa4.14□□□□□ -1.75
Ttc39b-202ENSMUST00000048274 Gm7579A0A1B0GRJ4 243 aa4.14□□□□□ -1.75
Ttc39b-202ENSMUST00000048274 Krtap5-5Q2TA51 241 aa4.14□□□□□ -1.75
Ttc39b-202ENSMUST00000048274 Krtap5-4Q62220 223 aa4.14□□□□□ -1.75
Ttc39b-202ENSMUST00000048274 Gm10153A0A1B0GRL1 320 aa4.14□□□□□ -1.75
Ttc39b-202ENSMUST00000048274 DstQ91ZU6 7393 aaKnown RBP4.11□□□□□ -1.75
Ttc39b-202ENSMUST00000048274 NebE9Q1W3 7152 aa4.1□□□□□ -1.75
Ttc39b-202ENSMUST00000048274 Gm10024A0A0A0MQA4 119 aa4.08□□□□□ -1.76
Ttc39b-202ENSMUST00000048274 Mt3P28184 68 aa3.96□□□□□ -1.78
Ttc39b-202ENSMUST00000048274 AhnakE9Q616 5656 aaKnown RBP3.81□□□□□ -1.8
Ttc39b-202ENSMUST00000048274 1110025L11RikO09048 78 aa3.52□□□□□ -1.85
Ttc39b-202ENSMUST00000048274 Krtap6-5Q925H3 78 aa3.52□□□□□ -1.85
Ttc39b-202ENSMUST00000048274 Sprr2bO70554 98 aa3.42□□□□□ -1.86
Ttc39b-202ENSMUST00000048274 Muc16A0A140LJ72 8478 aa3.29□□□□□ -1.88
Ttc39b-202ENSMUST00000048274 Krtap5-1Q64507 230 aa3.17□□□□□ -1.9
Ttc39b-202ENSMUST00000048274 Gm10229O08631 77 aa3.09□□□□□ -1.91
Ttc39b-202ENSMUST00000048274 Gm4559A4IF42 199 aa3□□□□□ -1.93
Ttc39b-202ENSMUST00000048274 Krtap21-1Q925H4 128 aa2.92□□□□□ -1.94
Ttc39b-202ENSMUST00000048274 Phgr1Q8K0G7 91 aa2.9□□□□□ -1.95
Ttc39b-202ENSMUST00000048274 Krtap6-2O08884 159 aa2.56□□□□□ -2
Retrieved 80 of 22,080 RNA–protein pairs in 80.9 ms