RNA–Protein interactions for RNA: ENSMUST00000039074.12

Shank3-201, Transcript of SH3 and multiple ankyrin repeat domains protein 3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Shank3, Length 7,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3-201ENSMUST00000039074 Krtap4-7Q9D732 168 aa4.61□□□□□ -1.67
Shank3-201ENSMUST00000039074 Birc6O88738 4882 aa4.58□□□□□ -1.68
Shank3-201ENSMUST00000039074 Lce1a2Q9D1K4 149 aa4.57□□□□□ -1.68
Shank3-201ENSMUST00000039074 Krtap4-13Q9D7P3 165 aa4.51□□□□□ -1.69
Shank3-201ENSMUST00000039074 Sprr2hO70559 108 aa4.5□□□□□ -1.69
Shank3-201ENSMUST00000039074 Gm11562A0PK51 136 aa4.41□□□□□ -1.7
Shank3-201ENSMUST00000039074 Krtap4-16Q91W93 202 aa4.41□□□□□ -1.7
Shank3-201ENSMUST00000039074 4932415D10RikA0A1W2P6U8 4986 aa4.4□□□□□ -1.7
Shank3-201ENSMUST00000039074 Lce1kJ3QP15 125 aa4.39□□□□□ -1.71
Shank3-201ENSMUST00000039074 Gm11938Q9D3H4 131 aa4.36□□□□□ -1.71
Shank3-201ENSMUST00000039074 ZanO88799 5376 aa4.34□□□□□ -1.72
Shank3-201ENSMUST00000039074 Mdn1A2ANY6 5589 aaKnown RBP4.32□□□□□ -1.72
Shank3-201ENSMUST00000039074 Krtap17-1A2A5X6 109 aa4.31□□□□□ -1.72
Shank3-201ENSMUST00000039074 Muc5bE9Q5I3 4800 aa4.29□□□□□ -1.72
Shank3-201ENSMUST00000039074 Lce1a1Q9CQH5 143 aa4.29□□□□□ -1.72
Shank3-201ENSMUST00000039074 Mt3P28184 68 aa4.26□□□□□ -1.73
Shank3-201ENSMUST00000039074 Fat4Q2PZL6 4981 aa4.25□□□□□ -1.73
Shank3-201ENSMUST00000039074 Krtap6-3A0A087WQL6 57 aa4.23□□□□□ -1.73
Shank3-201ENSMUST00000039074 Abca13Q5SSE9 5034 aa4.2□□□□□ -1.74
Shank3-201ENSMUST00000039074 Ubr4A2AN08 5180 aa4.19□□□□□ -1.74
Shank3-201ENSMUST00000039074 Syne2Q6ZWQ0 6874 aaKnown RBP4.17□□□□□ -1.74
Shank3-201ENSMUST00000039074 Hmcn2A2AJ76 5100 aa4.11□□□□□ -1.75
Shank3-201ENSMUST00000039074 Fsip2A2ARZ3 6995 aa4.11□□□□□ -1.75
Shank3-201ENSMUST00000039074 Gm11554B1AQB2 190 aa4.07□□□□□ -1.76
Shank3-201ENSMUST00000039074 Syne1Q6ZWR6 8799 aa4.03□□□□□ -1.76
Shank3-201ENSMUST00000039074 Sprr2bO70554 98 aa4□□□□□ -1.77
Shank3-201ENSMUST00000039074 Rnf213E9Q555 5152 aaKnown RBP3.93□□□□□ -1.78
Shank3-201ENSMUST00000039074 Ush2AQ2QI47 5193 aa3.9□□□□□ -1.78
Shank3-201ENSMUST00000039074 Krtap20-2E9Q0A8 60 aa3.85□□□□□ -1.79
Shank3-201ENSMUST00000039074 SspoQ8CG65 4998 aa3.82□□□□□ -1.8
Shank3-201ENSMUST00000039074 Mt1P02802 61 aaKnown RBP3.79□□□□□ -1.8
Shank3-201ENSMUST00000039074 Gm11555B1AQ89 175 aa3.49□□□□□ -1.85
Shank3-201ENSMUST00000039074 Eppk1Q8R0W0 6548 aa3.48□□□□□ -1.85
Shank3-201ENSMUST00000039074 ObscnA2AAJ9 8891 aaKnown RBP3.29□□□□□ -1.88
Shank3-201ENSMUST00000039074 DstQ91ZU6 7393 aaKnown RBP3.16□□□□□ -1.9
Shank3-201ENSMUST00000039074 Gm11559Q9D3H7 191 aa3.13□□□□□ -1.91
Shank3-201ENSMUST00000039074 1110025L11RikO09048 78 aa3.11□□□□□ -1.91
Shank3-201ENSMUST00000039074 Krtap6-5Q925H3 78 aa3.11□□□□□ -1.91
Shank3-201ENSMUST00000039074 Muc16A0A140LJ72 8478 aa3.11□□□□□ -1.91
Shank3-201ENSMUST00000039074 NebE9Q1W3 7152 aa3.08□□□□□ -1.92
Shank3-201ENSMUST00000039074 Gpr98Q8VHN7 6298 aaKnown RBP3.03□□□□□ -1.92
Shank3-201ENSMUST00000039074 Macf1Q9QXZ0 7354 aaKnown RBP3.03□□□□□ -1.92
Shank3-201ENSMUST00000039074 Phgr1Q8K0G7 91 aa3□□□□□ -1.93
Shank3-201ENSMUST00000039074 Gm10229O08631 77 aa2.99□□□□□ -1.93
Shank3-201ENSMUST00000039074 Kmt2dQ6PDK2 5588 aa2.99□□□□□ -1.93
Shank3-201ENSMUST00000039074 Gm11568A2A4M2 211 aa2.97□□□□□ -1.93
Shank3-201ENSMUST00000039074 Krtap9-1Q64526 186 aa2.97□□□□□ -1.93
Shank3-201ENSMUST00000039074 Gm11567Q9D141 195 aa2.92□□□□□ -1.94
Shank3-201ENSMUST00000039074 Gm11639A0A1D5RLM8 5808 aa2.77□□□□□ -1.97
Shank3-201ENSMUST00000039074 Muc19Q6PZE0 7524 aa2.7□□□□□ -1.98
Shank3-201ENSMUST00000039074 Hmcn1D3YXG0 5634 aa2.64□□□□□ -1.99
Shank3-201ENSMUST00000039074 Krtap5-2Q9D5Z7 189 aa2.62□□□□□ -1.99
Shank3-201ENSMUST00000039074 Gm4553A0A1B0GSA9 284 aa2.49□□□□□ -2.01
Shank3-201ENSMUST00000039074 Krtap6-2O08884 159 aa2.4□□□□□ -2.03
Shank3-201ENSMUST00000039074 AhnakE9Q616 5656 aaKnown RBP2.39□□□□□ -2.03
Shank3-201ENSMUST00000039074 Gm2431E9Q8S1 172 aa2.36□□□□□ -2.03
Shank3-201ENSMUST00000039074 A030005L19RikA0A1Y7VIU2 113 aa2.34□□□□□ -2.04
Shank3-201ENSMUST00000039074 Krtap21-1Q925H4 128 aa2.15□□□□□ -2.06
Shank3-201ENSMUST00000039074 Gm10153A0A1B0GRL1 320 aa2.15□□□□□ -2.07
Shank3-201ENSMUST00000039074 A0A1Y7VJH8 109 aa2.13□□□□□ -2.07
Shank3-201ENSMUST00000039074 Gm45337A0A1B0GS71 263 aa2.09□□□□□ -2.07
Shank3-201ENSMUST00000039074 Gm40460A0A1B0GR10 244 aa2.05□□□□□ -2.08
Shank3-201ENSMUST00000039074 Gm7579A0A1B0GRJ4 243 aa2.05□□□□□ -2.08
Shank3-201ENSMUST00000039074 Krtap5-5Q2TA51 241 aa2.05□□□□□ -2.08
Shank3-201ENSMUST00000039074 Krtap5-4Q62220 223 aa2.05□□□□□ -2.08
Shank3-201ENSMUST00000039074 Gm39115A0A1B0GSH7 232 aa1.96□□□□□ -2.09
Shank3-201ENSMUST00000039074 Gm45618A0A1B0GSA0 219 aa1.66□□□□□ -2.14
Shank3-201ENSMUST00000039074 A0A1Y7VLE6 161 aa1.61□□□□□ -2.15
Shank3-201ENSMUST00000039074 Gm29735A0A1B0GT06 219 aa1.52□□□□□ -2.17
Shank3-201ENSMUST00000039074 A0A1Y7VJ07 166 aa1.46□□□□□ -2.18
Shank3-201ENSMUST00000039074 Krtap5-1Q64507 230 aa1.42□□□□□ -2.18
Shank3-201ENSMUST00000039074 A0A286YCP9 139 aa1.39□□□□□ -2.19
Shank3-201ENSMUST00000039074 Krtap28-10A0A1Y7VP58 119 aa1.04□□□□□ -2.24
Shank3-201ENSMUST00000039074 Krtap28-13A0A087WQP5 138 aa1.04□□□□□ -2.24
Shank3-201ENSMUST00000039074 A030014E15RikA0A1Y7VJV2 120 aa0.97□□□□□ -2.25
Shank3-201ENSMUST00000039074 A030003K21RikA0A1Y7VIM3 128 aa0.88□□□□□ -2.27
Shank3-201ENSMUST00000039074 Gm4559A4IF42 199 aa0.85□□□□□ -2.27
Shank3-201ENSMUST00000039074 Gm6217A0A1Y7VJK9 128 aa0.71□□□□□ -2.3
Shank3-201ENSMUST00000039074 A030005K14RikA0A1Y7VNY1 122 aa0.64□□□□□ -2.31
Shank3-201ENSMUST00000039074 Gm7544A0A1Y7VJ58 118 aa0.47□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 137.7 ms