RNA–Protein interactions for RNA: ENSMUST00000034928.11

Tpm1-202, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-202ENSMUST00000034928 Krtap4-6Q3V4B7 195 aa5.11□□□□□ -1.59
Tpm1-202ENSMUST00000034928 Gm11596B1AQB0 205 aa5.08□□□□□ -1.6
Tpm1-202ENSMUST00000034928 Syne2Q6ZWQ0 6874 aaKnown RBP5.04□□□□□ -1.6
Tpm1-202ENSMUST00000034928 Krtap22-2J3QNX6 67 aa5.01□□□□□ -1.61
Tpm1-202ENSMUST00000034928 Sprr2gO70558 76 aa5□□□□□ -1.61
Tpm1-202ENSMUST00000034928 4933428G20RikQ9D3X4 101 aa4.97□□□□□ -1.61
Tpm1-202ENSMUST00000034928 Mdn1A2ANY6 5589 aaKnown RBP4.96□□□□□ -1.62
Tpm1-202ENSMUST00000034928 Sprr2dO70555 85 aa4.95□□□□□ -1.62
Tpm1-202ENSMUST00000034928 Gm11564A2A4L9 201 aa4.88□□□□□ -1.63
Tpm1-202ENSMUST00000034928 Gm11595B1AQA7 289 aa4.88□□□□□ -1.63
Tpm1-202ENSMUST00000034928 Krtap4-8B1AQA8 209 aa4.88□□□□□ -1.63
Tpm1-202ENSMUST00000034928 Lce1lQ9D1G7 135 aa4.82□□□□□ -1.64
Tpm1-202ENSMUST00000034928 Gm10272F7CZ33 110 aa4.81□□□□□ -1.64
Tpm1-202ENSMUST00000034928 Gm11938Q9D3H4 131 aa4.81□□□□□ -1.64
Tpm1-202ENSMUST00000034928 Gm10100J3QK64 120 aa4.76□□□□□ -1.65
Tpm1-202ENSMUST00000034928 Gm45618A0A1B0GSA0 219 aa4.75□□□□□ -1.65
Tpm1-202ENSMUST00000034928 Krtap4-9B1AQA9 244 aa4.74□□□□□ -1.65
Tpm1-202ENSMUST00000034928 Mt4P47945 62 aa4.74□□□□□ -1.65
Tpm1-202ENSMUST00000034928 Krtap19-4Q925H7 84 aa4.66□□□□□ -1.66
Tpm1-202ENSMUST00000034928 Sprr2kO70562 68 aa4.58□□□□□ -1.68
Tpm1-202ENSMUST00000034928 Krtap4-13Q9D7P3 165 aa4.57□□□□□ -1.68
Tpm1-202ENSMUST00000034928 Fsip2A2ARZ3 6995 aa4.55□□□□□ -1.68
Tpm1-202ENSMUST00000034928 Lce1cQ9D1C5 147 aa4.51□□□□□ -1.69
Tpm1-202ENSMUST00000034928 2300003K06RikA2A4M0 262 aa4.47□□□□□ -1.69
Tpm1-202ENSMUST00000034928 Lce3bQ9CQM7 98 aa4.47□□□□□ -1.69
Tpm1-202ENSMUST00000034928 Krtap6-3A0A087WQL6 57 aa4.44□□□□□ -1.7
Tpm1-202ENSMUST00000034928 Gm10142J3KMP7 120 aa4.39□□□□□ -1.71
Tpm1-202ENSMUST00000034928 Gm39115A0A1B0GSH7 232 aa4.38□□□□□ -1.71
Tpm1-202ENSMUST00000034928 Lce1fB9EJP6 147 aa4.33□□□□□ -1.72
Tpm1-202ENSMUST00000034928 Gm11554B1AQB2 190 aa4.28□□□□□ -1.72
Tpm1-202ENSMUST00000034928 Sprr2hO70559 108 aa4.28□□□□□ -1.72
Tpm1-202ENSMUST00000034928 Sprr2iO70560 76 aa4.28□□□□□ -1.72
Tpm1-202ENSMUST00000034928 Lce3cQ91V05 98 aa4.25□□□□□ -1.73
Tpm1-202ENSMUST00000034928 Lce3eF8VQJ0 98 aa4.22□□□□□ -1.73
Tpm1-202ENSMUST00000034928 Sprr2eO70556 76 aa4.22□□□□□ -1.73
Tpm1-202ENSMUST00000034928 Lce3fQ6PAI4 98 aa4.22□□□□□ -1.73
Tpm1-202ENSMUST00000034928 Lce3dE9Q8V1 98 aa4.21□□□□□ -1.74
Tpm1-202ENSMUST00000034928 Syne1Q6ZWR6 8799 aa4.21□□□□□ -1.74
Tpm1-202ENSMUST00000034928 Gm29735A0A1B0GT06 219 aa4.18□□□□□ -1.74
Tpm1-202ENSMUST00000034928 Gm2431E9Q8S1 172 aa4.09□□□□□ -1.76
Tpm1-202ENSMUST00000034928 Lce1kJ3QP15 125 aa4.09□□□□□ -1.76
Tpm1-202ENSMUST00000034928 Krtap20-2E9Q0A8 60 aa4.07□□□□□ -1.76
Tpm1-202ENSMUST00000034928 Lce3aQ497I5 98 aa4.07□□□□□ -1.76
Tpm1-202ENSMUST00000034928 Sprr2fO70557 76 aa4.07□□□□□ -1.76
Tpm1-202ENSMUST00000034928 Mt1P02802 61 aaKnown RBP4.06□□□□□ -1.76
Tpm1-202ENSMUST00000034928 ObscnA2AAJ9 8891 aaKnown RBP3.99□□□□□ -1.77
Tpm1-202ENSMUST00000034928 Krtap5-2Q9D5Z7 189 aa3.99□□□□□ -1.77
Tpm1-202ENSMUST00000034928 Gm11567Q9D141 195 aa3.98□□□□□ -1.77
Tpm1-202ENSMUST00000034928 Mt3P28184 68 aa3.92□□□□□ -1.78
Tpm1-202ENSMUST00000034928 Gm11568A2A4M2 211 aa3.91□□□□□ -1.78
Tpm1-202ENSMUST00000034928 Krtap9-1Q64526 186 aa3.91□□□□□ -1.78
Tpm1-202ENSMUST00000034928 Gm4553A0A1B0GSA9 284 aa3.76□□□□□ -1.81
Tpm1-202ENSMUST00000034928 Gm45337A0A1B0GS71 263 aa3.69□□□□□ -1.82
Tpm1-202ENSMUST00000034928 Gm10153A0A1B0GRL1 320 aa3.68□□□□□ -1.82
Tpm1-202ENSMUST00000034928 Macf1Q9QXZ0 7354 aaKnown RBP3.65□□□□□ -1.82
Tpm1-202ENSMUST00000034928 Gm10024A0A0A0MQA4 119 aa3.6□□□□□ -1.83
Tpm1-202ENSMUST00000034928 Krtap5-4Q62220 223 aa3.59□□□□□ -1.83
Tpm1-202ENSMUST00000034928 Krtap4-16Q91W93 202 aa3.56□□□□□ -1.84
Tpm1-202ENSMUST00000034928 Kmt2dQ6PDK2 5588 aa3.54□□□□□ -1.84
Tpm1-202ENSMUST00000034928 Gm40460A0A1B0GR10 244 aa3.53□□□□□ -1.84
Tpm1-202ENSMUST00000034928 Gm7579A0A1B0GRJ4 243 aa3.53□□□□□ -1.84
Tpm1-202ENSMUST00000034928 Krtap5-5Q2TA51 241 aa3.53□□□□□ -1.84
Tpm1-202ENSMUST00000034928 Eppk1Q8R0W0 6548 aa3.5□□□□□ -1.85
Tpm1-202ENSMUST00000034928 Hmcn1D3YXG0 5634 aa3.45□□□□□ -1.86
Tpm1-202ENSMUST00000034928 Muc19Q6PZE0 7524 aa3.27□□□□□ -1.89
Tpm1-202ENSMUST00000034928 Gm11639A0A1D5RLM8 5808 aa3.25□□□□□ -1.89
Tpm1-202ENSMUST00000034928 DstQ91ZU6 7393 aaKnown RBP3.25□□□□□ -1.89
Tpm1-202ENSMUST00000034928 Krtap5-1Q64507 230 aa3.21□□□□□ -1.9
Tpm1-202ENSMUST00000034928 Gm4559A4IF42 199 aa3.14□□□□□ -1.91
Tpm1-202ENSMUST00000034928 1110025L11RikO09048 78 aa3.14□□□□□ -1.91
Tpm1-202ENSMUST00000034928 Krtap6-5Q925H3 78 aa3.14□□□□□ -1.91
Tpm1-202ENSMUST00000034928 Sprr2bO70554 98 aa3.04□□□□□ -1.92
Tpm1-202ENSMUST00000034928 Gpr98Q8VHN7 6298 aaKnown RBP3.03□□□□□ -1.92
Tpm1-202ENSMUST00000034928 NebE9Q1W3 7152 aa3.01□□□□□ -1.93
Tpm1-202ENSMUST00000034928 AhnakE9Q616 5656 aaKnown RBP2.98□□□□□ -1.93
Tpm1-202ENSMUST00000034928 Muc16A0A140LJ72 8478 aa2.79□□□□□ -1.96
Tpm1-202ENSMUST00000034928 Gm10229O08631 77 aa2.77□□□□□ -1.97
Tpm1-202ENSMUST00000034928 Krtap21-1Q925H4 128 aa2.58□□□□□ -2
Tpm1-202ENSMUST00000034928 Phgr1Q8K0G7 91 aa2.52□□□□□ -2.01
Tpm1-202ENSMUST00000034928 Krtap6-2O08884 159 aa2.33□□□□□ -2.04
Retrieved 80 of 22,080 RNA–protein pairs in 194 ms