RNA–Protein interactions for RNA: ENSMUST00000033882.9

Chrna6-201, Transcript of Neuronal acetylcholine receptor subunit alpha-6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chrna6, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6-201ENSMUST00000033882 Mdn1A2ANY6 5589 aaKnown RBP2□□□□□ -2.09
Chrna6-201ENSMUST00000033882 Krtap4-6Q3V4B7 195 aa2□□□□□ -2.09
Chrna6-201ENSMUST00000033882 Lce1bQ9D149 137 aa2□□□□□ -2.09
Chrna6-201ENSMUST00000033882 Gm11596B1AQB0 205 aa1.96□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Syne2Q6ZWQ0 6874 aaKnown RBP1.96□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Lce1lQ9D1G7 135 aa1.94□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Gm39115A0A1B0GSH7 232 aa1.92□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Gm11564A2A4L9 201 aa1.91□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Gm11595B1AQA7 289 aa1.91□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Krtap4-8B1AQA8 209 aa1.91□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Lce1eQ9D139 143 aa1.91□□□□□ -2.1
Chrna6-201ENSMUST00000033882 Krtap4-9B1AQA9 244 aa1.88□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Krtap6-3A0A087WQL6 57 aa1.87□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Gm10272F7CZ33 110 aa1.87□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Gm11938Q9D3H4 131 aa1.87□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Sprr2dO70555 85 aa1.86□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Gm11554B1AQB2 190 aa1.84□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Mt4P47945 62 aa1.84□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Gm11559Q9D3H7 191 aa1.84□□□□□ -2.11
Chrna6-201ENSMUST00000033882 Sprr2gO70558 76 aa1.84□□□□□ -2.12
Chrna6-201ENSMUST00000033882 Gpr98Q8VHN7 6298 aaKnown RBP1.83□□□□□ -2.12
Chrna6-201ENSMUST00000033882 Fsip2A2ARZ3 6995 aa1.81□□□□□ -2.12
Chrna6-201ENSMUST00000033882 Gm29735A0A1B0GT06 219 aa1.79□□□□□ -2.12
Chrna6-201ENSMUST00000033882 Gm11567Q9D141 195 aa1.78□□□□□ -2.12
Chrna6-201ENSMUST00000033882 Krtap4-13Q9D7P3 165 aa1.78□□□□□ -2.12
Chrna6-201ENSMUST00000033882 Syne1Q6ZWR6 8799 aa1.77□□□□□ -2.13
Chrna6-201ENSMUST00000033882 Krtap19-4Q925H7 84 aa1.77□□□□□ -2.13
Chrna6-201ENSMUST00000033882 2300003K06RikA2A4M0 262 aa1.76□□□□□ -2.13
Chrna6-201ENSMUST00000033882 Krtap20-2E9Q0A8 60 aa1.76□□□□□ -2.13
Chrna6-201ENSMUST00000033882 4933428G20RikQ9D3X4 101 aa1.76□□□□□ -2.13
Chrna6-201ENSMUST00000033882 Gm11639A0A1D5RLM8 5808 aa1.74□□□□□ -2.13
Chrna6-201ENSMUST00000033882 Lce1cQ9D1C5 147 aa1.74□□□□□ -2.13
Chrna6-201ENSMUST00000033882 Lce3bQ9CQM7 98 aa1.73□□□□□ -2.13
Chrna6-201ENSMUST00000033882 Gm2431E9Q8S1 172 aa1.73□□□□□ -2.13
Chrna6-201ENSMUST00000033882 Krtap5-2Q9D5Z7 189 aa1.7□□□□□ -2.14
Chrna6-201ENSMUST00000033882 Lce1fB9EJP6 147 aa1.69□□□□□ -2.14
Chrna6-201ENSMUST00000033882 Sprr2kO70562 68 aa1.69□□□□□ -2.14
Chrna6-201ENSMUST00000033882 Gm11568A2A4M2 211 aa1.67□□□□□ -2.14
Chrna6-201ENSMUST00000033882 Krtap9-1Q64526 186 aa1.67□□□□□ -2.14
Chrna6-201ENSMUST00000033882 Lce1kJ3QP15 125 aa1.67□□□□□ -2.14
Chrna6-201ENSMUST00000033882 Mt1P02802 61 aaKnown RBP1.67□□□□□ -2.14
Chrna6-201ENSMUST00000033882 Sprr2iO70560 76 aa1.64□□□□□ -2.15
Chrna6-201ENSMUST00000033882 Lce3cQ91V05 98 aa1.62□□□□□ -2.15
Chrna6-201ENSMUST00000033882 Gm10153A0A1B0GRL1 320 aa1.61□□□□□ -2.15
Chrna6-201ENSMUST00000033882 Lce3dE9Q8V1 98 aa1.61□□□□□ -2.15
Chrna6-201ENSMUST00000033882 Gm10100J3QK64 120 aa1.6□□□□□ -2.15
Chrna6-201ENSMUST00000033882 Lce3eF8VQJ0 98 aa1.6□□□□□ -2.15
Chrna6-201ENSMUST00000033882 Lce3fQ6PAI4 98 aa1.6□□□□□ -2.15
Chrna6-201ENSMUST00000033882 ObscnA2AAJ9 8891 aaKnown RBP1.59□□□□□ -2.15
Chrna6-201ENSMUST00000033882 Sprr2hO70559 108 aa1.58□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Gm4553A0A1B0GSA9 284 aa1.58□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Gm45337A0A1B0GS71 263 aa1.57□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Gm10142J3KMP7 120 aa1.57□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Sprr2eO70556 76 aa1.56□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Gm40460A0A1B0GR10 244 aa1.55□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Gm7579A0A1B0GRJ4 243 aa1.55□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Krtap5-5Q2TA51 241 aa1.55□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Krtap5-4Q62220 223 aa1.55□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Lce3aQ497I5 98 aa1.53□□□□□ -2.16
Chrna6-201ENSMUST00000033882 Hmcn1D3YXG0 5634 aa1.52□□□□□ -2.17
Chrna6-201ENSMUST00000033882 Kmt2dQ6PDK2 5588 aa1.5□□□□□ -2.17
Chrna6-201ENSMUST00000033882 Macf1Q9QXZ0 7354 aaKnown RBP1.47□□□□□ -2.17
Chrna6-201ENSMUST00000033882 Mt3P28184 68 aa1.46□□□□□ -2.17
Chrna6-201ENSMUST00000033882 Sprr2fO70557 76 aa1.43□□□□□ -2.18
Chrna6-201ENSMUST00000033882 Krtap5-1Q64507 230 aa1.41□□□□□ -2.18
Chrna6-201ENSMUST00000033882 Gm4559A4IF42 199 aa1.37□□□□□ -2.19
Chrna6-201ENSMUST00000033882 Krtap4-16Q91W93 202 aa1.36□□□□□ -2.19
Chrna6-201ENSMUST00000033882 Gm10024A0A0A0MQA4 119 aa1.34□□□□□ -2.2
Chrna6-201ENSMUST00000033882 Muc19Q6PZE0 7524 aa1.33□□□□□ -2.2
Chrna6-201ENSMUST00000033882 AhnakE9Q616 5656 aaKnown RBP1.29□□□□□ -2.2
Chrna6-201ENSMUST00000033882 1110025L11RikO09048 78 aa1.24□□□□□ -2.21
Chrna6-201ENSMUST00000033882 Krtap6-5Q925H3 78 aa1.24□□□□□ -2.21
Chrna6-201ENSMUST00000033882 DstQ91ZU6 7393 aaKnown RBP1.24□□□□□ -2.21
Chrna6-201ENSMUST00000033882 Sprr2bO70554 98 aa1.24□□□□□ -2.21
Chrna6-201ENSMUST00000033882 Muc16A0A140LJ72 8478 aa1.21□□□□□ -2.22
Chrna6-201ENSMUST00000033882 NebE9Q1W3 7152 aa1.19□□□□□ -2.22
Chrna6-201ENSMUST00000033882 Gm10229O08631 77 aa1.1□□□□□ -2.23
Chrna6-201ENSMUST00000033882 Krtap21-1Q925H4 128 aa1.03□□□□□ -2.24
Chrna6-201ENSMUST00000033882 Krtap6-2O08884 159 aa0.94□□□□□ -2.26
Chrna6-201ENSMUST00000033882 Phgr1Q8K0G7 91 aa0.94□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 76.7 ms