RNA–Protein interactions for RNA: ENSMUST00000029549.15

Tpm3-201, Transcript of Tropomyosin alpha-3 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm3, Length 2,230 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3-201ENSMUST00000029549 Gm9112A2AI92 75 aa5.43□□□□□ -1.54
Tpm3-201ENSMUST00000029549 Krtap4-9B1AQA9 244 aa5.43□□□□□ -1.54
Tpm3-201ENSMUST00000029549 Mt4P47945 62 aa5.39□□□□□ -1.55
Tpm3-201ENSMUST00000029549 Krtap22-2J3QNX6 67 aa5.29□□□□□ -1.56
Tpm3-201ENSMUST00000029549 Lce1dQ9D731 133 aa5.29□□□□□ -1.56
Tpm3-201ENSMUST00000029549 Krtap4-13Q9D7P3 165 aa5.26□□□□□ -1.57
Tpm3-201ENSMUST00000029549 Lce1bQ9D149 137 aa5.15□□□□□ -1.59
Tpm3-201ENSMUST00000029549 Lce1a1Q9CQH5 143 aa5.13□□□□□ -1.59
Tpm3-201ENSMUST00000029549 2300003K06RikA2A4M0 262 aa5.08□□□□□ -1.6
Tpm3-201ENSMUST00000029549 Sprr2kO70562 68 aa5.05□□□□□ -1.6
Tpm3-201ENSMUST00000029549 Gm10272F7CZ33 110 aa5.03□□□□□ -1.6
Tpm3-201ENSMUST00000029549 Krtap6-3A0A087WQL6 57 aa4.99□□□□□ -1.61
Tpm3-201ENSMUST00000029549 Lce1lQ9D1G7 135 aa4.97□□□□□ -1.61
Tpm3-201ENSMUST00000029549 Sprr2gO70558 76 aa4.94□□□□□ -1.62
Tpm3-201ENSMUST00000029549 Sprr2dO70555 85 aa4.88□□□□□ -1.63
Tpm3-201ENSMUST00000029549 Gm11938Q9D3H4 131 aa4.87□□□□□ -1.63
Tpm3-201ENSMUST00000029549 Lce1eQ9D139 143 aa4.81□□□□□ -1.64
Tpm3-201ENSMUST00000029549 4933428G20RikQ9D3X4 101 aa4.77□□□□□ -1.65
Tpm3-201ENSMUST00000029549 Syne1Q6ZWR6 8799 aa4.74□□□□□ -1.65
Tpm3-201ENSMUST00000029549 Lce1cQ9D1C5 147 aa4.66□□□□□ -1.66
Tpm3-201ENSMUST00000029549 Krtap20-2E9Q0A8 60 aa4.65□□□□□ -1.67
Tpm3-201ENSMUST00000029549 Krtap19-4Q925H7 84 aa4.64□□□□□ -1.67
Tpm3-201ENSMUST00000029549 Lce3bQ9CQM7 98 aa4.64□□□□□ -1.67
Tpm3-201ENSMUST00000029549 Lce1kJ3QP15 125 aa4.57□□□□□ -1.68
Tpm3-201ENSMUST00000029549 Sprr2iO70560 76 aa4.5□□□□□ -1.69
Tpm3-201ENSMUST00000029549 Gm10100J3QK64 120 aa4.48□□□□□ -1.69
Tpm3-201ENSMUST00000029549 Krtap5-2Q9D5Z7 189 aa4.48□□□□□ -1.69
Tpm3-201ENSMUST00000029549 Lce1fB9EJP6 147 aa4.47□□□□□ -1.69
Tpm3-201ENSMUST00000029549 Macf1Q9QXZ0 7354 aaKnown RBP4.44□□□□□ -1.7
Tpm3-201ENSMUST00000029549 Gm11568A2A4M2 211 aa4.44□□□□□ -1.7
Tpm3-201ENSMUST00000029549 Krtap9-1Q64526 186 aa4.44□□□□□ -1.7
Tpm3-201ENSMUST00000029549 Lce3cQ91V05 98 aa4.41□□□□□ -1.7
Tpm3-201ENSMUST00000029549 Gm10142J3KMP7 120 aa4.38□□□□□ -1.71
Tpm3-201ENSMUST00000029549 Lce3eF8VQJ0 98 aa4.37□□□□□ -1.71
Tpm3-201ENSMUST00000029549 Lce3fQ6PAI4 98 aa4.37□□□□□ -1.71
Tpm3-201ENSMUST00000029549 Lce3dE9Q8V1 98 aa4.34□□□□□ -1.72
Tpm3-201ENSMUST00000029549 Gm11559Q9D3H7 191 aa4.33□□□□□ -1.72
Tpm3-201ENSMUST00000029549 Gm11554B1AQB2 190 aa4.3□□□□□ -1.72
Tpm3-201ENSMUST00000029549 ObscnA2AAJ9 8891 aaKnown RBP4.28□□□□□ -1.72
Tpm3-201ENSMUST00000029549 Mt1P02802 61 aaKnown RBP4.27□□□□□ -1.73
Tpm3-201ENSMUST00000029549 Sprr2hO70559 108 aa4.25□□□□□ -1.73
Tpm3-201ENSMUST00000029549 Gm45618A0A1B0GSA0 219 aa4.22□□□□□ -1.73
Tpm3-201ENSMUST00000029549 Gm4553A0A1B0GSA9 284 aa4.21□□□□□ -1.74
Tpm3-201ENSMUST00000029549 Eppk1Q8R0W0 6548 aa4.19□□□□□ -1.74
Tpm3-201ENSMUST00000029549 Lce3aQ497I5 98 aa4.18□□□□□ -1.74
Tpm3-201ENSMUST00000029549 Gm2431E9Q8S1 172 aa4.14□□□□□ -1.75
Tpm3-201ENSMUST00000029549 Kmt2dQ6PDK2 5588 aa4.12□□□□□ -1.75
Tpm3-201ENSMUST00000029549 Hmcn1D3YXG0 5634 aa4.1□□□□□ -1.75
Tpm3-201ENSMUST00000029549 Gm10153A0A1B0GRL1 320 aa4.1□□□□□ -1.75
Tpm3-201ENSMUST00000029549 Gm45337A0A1B0GS71 263 aa4.07□□□□□ -1.76
Tpm3-201ENSMUST00000029549 Sprr2eO70556 76 aa4.07□□□□□ -1.76
Tpm3-201ENSMUST00000029549 Muc19Q6PZE0 7524 aa4.02□□□□□ -1.77
Tpm3-201ENSMUST00000029549 Gm39115A0A1B0GSH7 232 aa4.01□□□□□ -1.77
Tpm3-201ENSMUST00000029549 Gm11639A0A1D5RLM8 5808 aa3.96□□□□□ -1.78
Tpm3-201ENSMUST00000029549 Gm29735A0A1B0GT06 219 aa3.93□□□□□ -1.78
Tpm3-201ENSMUST00000029549 Krtap31-2Q8CAY5 177 aa3.93□□□□□ -1.78
Tpm3-201ENSMUST00000029549 Gm40460A0A1B0GR10 244 aa3.92□□□□□ -1.78
Tpm3-201ENSMUST00000029549 Gm7579A0A1B0GRJ4 243 aa3.92□□□□□ -1.78
Tpm3-201ENSMUST00000029549 Krtap5-5Q2TA51 241 aa3.92□□□□□ -1.78
Tpm3-201ENSMUST00000029549 Krtap5-4Q62220 223 aa3.92□□□□□ -1.78
Tpm3-201ENSMUST00000029549 Sprr2fO70557 76 aa3.9□□□□□ -1.79
Tpm3-201ENSMUST00000029549 DstQ91ZU6 7393 aaKnown RBP3.85□□□□□ -1.79
Tpm3-201ENSMUST00000029549 Gm11567Q9D141 195 aa3.83□□□□□ -1.8
Tpm3-201ENSMUST00000029549 Krtap31-1Q9D644 177 aa3.83□□□□□ -1.8
Tpm3-201ENSMUST00000029549 Mt3P28184 68 aa3.8□□□□□ -1.8
Tpm3-201ENSMUST00000029549 NebE9Q1W3 7152 aa3.66□□□□□ -1.82
Tpm3-201ENSMUST00000029549 Gpr98Q8VHN7 6298 aaKnown RBP3.65□□□□□ -1.83
Tpm3-201ENSMUST00000029549 Gm10024A0A0A0MQA4 119 aa3.64□□□□□ -1.83
Tpm3-201ENSMUST00000029549 Krtap4-16Q91W93 202 aa3.57□□□□□ -1.84
Tpm3-201ENSMUST00000029549 AhnakE9Q616 5656 aaKnown RBP3.52□□□□□ -1.85
Tpm3-201ENSMUST00000029549 Muc16A0A140LJ72 8478 aa3.31□□□□□ -1.88
Tpm3-201ENSMUST00000029549 1110025L11RikO09048 78 aa3.24□□□□□ -1.89
Tpm3-201ENSMUST00000029549 Krtap6-5Q925H3 78 aa3.24□□□□□ -1.89
Tpm3-201ENSMUST00000029549 Sprr2bO70554 98 aa2.92□□□□□ -1.94
Tpm3-201ENSMUST00000029549 Gm10229O08631 77 aa2.87□□□□□ -1.95
Tpm3-201ENSMUST00000029549 Krtap5-1Q64507 230 aa2.7□□□□□ -1.98
Tpm3-201ENSMUST00000029549 Gm4559A4IF42 199 aa2.69□□□□□ -1.98
Tpm3-201ENSMUST00000029549 Krtap21-1Q925H4 128 aa2.66□□□□□ -1.98
Tpm3-201ENSMUST00000029549 Phgr1Q8K0G7 91 aa2.52□□□□□ -2.01
Tpm3-201ENSMUST00000029549 Krtap6-2O08884 159 aa2.44□□□□□ -2.02
Retrieved 80 of 22,080 RNA–protein pairs in 172.2 ms