RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Krtap6-3A0A087WQL6 57 aa3.43□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Gm17402F6Z0L5 76 aa3.42□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Lce1dQ9D731 133 aa3.42□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Krtap4-13Q9D7P3 165 aa3.42□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Fsip2A2ARZ3 6995 aa3.41□□□□□ -1.86
Ssr3-201ENSMUST00000029414 Gm6217A0A1Y7VJK9 128 aa3.4□□□□□ -1.87
Ssr3-201ENSMUST00000029414 Krtap8-1O08633 61 aa3.39□□□□□ -1.87
Ssr3-201ENSMUST00000029414 Gm10100J3QK64 120 aa3.38□□□□□ -1.87
Ssr3-201ENSMUST00000029414 Gm40193A0A1B0GT39 78 aa3.34□□□□□ -1.87
Ssr3-201ENSMUST00000029414 Sprr2a3Q4KL71 83 aa3.33□□□□□ -1.88
Ssr3-201ENSMUST00000029414 Sprr2a1Q9CQK8 83 aa3.33□□□□□ -1.88
Ssr3-201ENSMUST00000029414 Sprr2kO70562 68 aa3.32□□□□□ -1.88
Ssr3-201ENSMUST00000029414 2300003K06RikA2A4M0 262 aa3.28□□□□□ -1.88
Ssr3-201ENSMUST00000029414 Krtap22-2J3QNX6 67 aa3.27□□□□□ -1.89
Ssr3-201ENSMUST00000029414 Krtap20-2E9Q0A8 60 aa3.14□□□□□ -1.91
Ssr3-201ENSMUST00000029414 Sprr2gO70558 76 aa3.12□□□□□ -1.91
Ssr3-201ENSMUST00000029414 Krtap19-9bQ99NG9 58 aa3.06□□□□□ -1.92
Ssr3-201ENSMUST00000029414 2310046K23RikA0A0A6YVW6 87 aa3.01□□□□□ -1.93
Ssr3-201ENSMUST00000029414 Lce1kJ3QP15 125 aa2.98□□□□□ -1.93
Ssr3-201ENSMUST00000029414 Gm10142J3KMP7 120 aa2.97□□□□□ -1.93
Ssr3-201ENSMUST00000029414 Krtap5-2Q9D5Z7 189 aa2.95□□□□□ -1.94
Ssr3-201ENSMUST00000029414 Sprr2iO70560 76 aa2.88□□□□□ -1.95
Ssr3-201ENSMUST00000029414 Tnp1P10856 55 aa2.87□□□□□ -1.95
Ssr3-201ENSMUST00000029414 Eppk1Q8R0W0 6548 aa2.83□□□□□ -1.96
Ssr3-201ENSMUST00000029414 Gm4553A0A1B0GSA9 284 aa2.82□□□□□ -1.96
Ssr3-201ENSMUST00000029414 Gm11568A2A4M2 211 aa2.81□□□□□ -1.96
Ssr3-201ENSMUST00000029414 Krtap9-1Q64526 186 aa2.81□□□□□ -1.96
Ssr3-201ENSMUST00000029414 Gm11554B1AQB2 190 aa2.79□□□□□ -1.96
Ssr3-201ENSMUST00000029414 Lce3bQ9CQM7 98 aa2.79□□□□□ -1.96
Ssr3-201ENSMUST00000029414 Syne1Q6ZWR6 8799 aa2.78□□□□□ -1.96
Ssr3-201ENSMUST00000029414 Gm10272F7CZ33 110 aa2.75□□□□□ -1.97
Ssr3-201ENSMUST00000029414 Gm2431E9Q8S1 172 aa2.73□□□□□ -1.97
Ssr3-201ENSMUST00000029414 4933428G20RikQ9D3X4 101 aa2.72□□□□□ -1.97
Ssr3-201ENSMUST00000029414 Kmt2dQ6PDK2 5588 aa2.72□□□□□ -1.97
Ssr3-201ENSMUST00000029414 Gm45337A0A1B0GS71 263 aa2.71□□□□□ -1.98
Ssr3-201ENSMUST00000029414 Gm11639A0A1D5RLM8 5808 aa2.68□□□□□ -1.98
Ssr3-201ENSMUST00000029414 Macf1Q9QXZ0 7354 aaKnown RBP2.68□□□□□ -1.98
Ssr3-201ENSMUST00000029414 Lce1fB9EJP6 147 aa2.67□□□□□ -1.98
Ssr3-201ENSMUST00000029414 Lce1cQ9D1C5 147 aa2.67□□□□□ -1.98
Ssr3-201ENSMUST00000029414 Gm10153A0A1B0GRL1 320 aa2.63□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Gm11938Q9D3H4 131 aa2.61□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Gm40460A0A1B0GR10 244 aa2.61□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Gm7579A0A1B0GRJ4 243 aa2.61□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Gm45618A0A1B0GSA0 219 aa2.61□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Krtap5-5Q2TA51 241 aa2.61□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Krtap5-4Q62220 223 aa2.61□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Muc19Q6PZE0 7524 aa2.59□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Mt1P02802 61 aaKnown RBP2.59□□□□□ -1.99
Ssr3-201ENSMUST00000029414 Gm39115A0A1B0GSH7 232 aa2.58□□□□□ -2
Ssr3-201ENSMUST00000029414 Krtap19-4Q925H7 84 aa2.57□□□□□ -2
Ssr3-201ENSMUST00000029414 Hmcn1D3YXG0 5634 aa2.56□□□□□ -2
Ssr3-201ENSMUST00000029414 Gm11567Q9D141 195 aa2.49□□□□□ -2.01
Ssr3-201ENSMUST00000029414 Gpr98Q8VHN7 6298 aaKnown RBP2.48□□□□□ -2.01
Ssr3-201ENSMUST00000029414 Lce3cQ91V05 98 aa2.47□□□□□ -2.01
Ssr3-201ENSMUST00000029414 Lce3dE9Q8V1 98 aa2.44□□□□□ -2.02
Ssr3-201ENSMUST00000029414 Sprr2dO70555 85 aa2.43□□□□□ -2.02
Ssr3-201ENSMUST00000029414 Krtap4-16Q91W93 202 aa2.42□□□□□ -2.02
Ssr3-201ENSMUST00000029414 DstQ91ZU6 7393 aaKnown RBP2.42□□□□□ -2.02
Ssr3-201ENSMUST00000029414 Mt3P28184 68 aa2.39□□□□□ -2.03
Ssr3-201ENSMUST00000029414 Sprr2fO70557 76 aa2.36□□□□□ -2.03
Ssr3-201ENSMUST00000029414 Gm29735A0A1B0GT06 219 aa2.35□□□□□ -2.03
Ssr3-201ENSMUST00000029414 Lce3eF8VQJ0 98 aa2.35□□□□□ -2.03
Ssr3-201ENSMUST00000029414 Lce3fQ6PAI4 98 aa2.35□□□□□ -2.03
Ssr3-201ENSMUST00000029414 NebE9Q1W3 7152 aa2.33□□□□□ -2.04
Ssr3-201ENSMUST00000029414 Gm10024A0A0A0MQA4 119 aa2.32□□□□□ -2.04
Ssr3-201ENSMUST00000029414 ObscnA2AAJ9 8891 aaKnown RBP2.31□□□□□ -2.04
Ssr3-201ENSMUST00000029414 AhnakE9Q616 5656 aaKnown RBP2.29□□□□□ -2.04
Ssr3-201ENSMUST00000029414 Lce3aQ497I5 98 aa2.25□□□□□ -2.05
Ssr3-201ENSMUST00000029414 Muc16A0A140LJ72 8478 aa2.21□□□□□ -2.06
Ssr3-201ENSMUST00000029414 Sprr2eO70556 76 aa2.13□□□□□ -2.07
Ssr3-201ENSMUST00000029414 Sprr2hO70559 108 aa2.1□□□□□ -2.07
Ssr3-201ENSMUST00000029414 1110025L11RikO09048 78 aa1.84□□□□□ -2.11
Ssr3-201ENSMUST00000029414 Krtap6-5Q925H3 78 aa1.84□□□□□ -2.11
Ssr3-201ENSMUST00000029414 Gm4559A4IF42 199 aa1.84□□□□□ -2.12
Ssr3-201ENSMUST00000029414 Krtap5-1Q64507 230 aa1.74□□□□□ -2.13
Ssr3-201ENSMUST00000029414 Gm10229O08631 77 aa1.71□□□□□ -2.14
Ssr3-201ENSMUST00000029414 Sprr2bO70554 98 aa1.49□□□□□ -2.17
Ssr3-201ENSMUST00000029414 Krtap21-1Q925H4 128 aa1.49□□□□□ -2.17
Ssr3-201ENSMUST00000029414 Krtap6-2O08884 159 aa1.48□□□□□ -2.17
Ssr3-201ENSMUST00000029414 Phgr1Q8K0G7 91 aa1.34□□□□□ -2.2
Retrieved 80 of 22,080 RNA–protein pairs in 106.3 ms