RNA–Protein interactions for RNA: ENSMUST00000025522.10

Pdgfrb-201, Transcript of Platelet-derived growth factor receptor beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pdgfrb, Length 5,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfrb-201ENSMUST00000025522 Krtap4-7Q9D732 168 aa3.4□□□□□ -1.87
Pdgfrb-201ENSMUST00000025522 Muc5bE9Q5I3 4800 aa3.39□□□□□ -1.87
Pdgfrb-201ENSMUST00000025522 Gm11562A0PK51 136 aa3.39□□□□□ -1.87
Pdgfrb-201ENSMUST00000025522 Lce1a2Q9D1K4 149 aa3.37□□□□□ -1.87
Pdgfrb-201ENSMUST00000025522 Gm11938Q9D3H4 131 aa3.34□□□□□ -1.88
Pdgfrb-201ENSMUST00000025522 ZanO88799 5376 aa3.33□□□□□ -1.88
Pdgfrb-201ENSMUST00000025522 Fat4Q2PZL6 4981 aa3.32□□□□□ -1.88
Pdgfrb-201ENSMUST00000025522 Krtap4-13Q9D7P3 165 aa3.3□□□□□ -1.88
Pdgfrb-201ENSMUST00000025522 Krtap6-3A0A087WQL6 57 aa3.28□□□□□ -1.88
Pdgfrb-201ENSMUST00000025522 Mdn1A2ANY6 5589 aaKnown RBP3.25□□□□□ -1.89
Pdgfrb-201ENSMUST00000025522 Mt3P28184 68 aa3.25□□□□□ -1.89
Pdgfrb-201ENSMUST00000025522 Sprr2hO70559 108 aa3.24□□□□□ -1.89
Pdgfrb-201ENSMUST00000025522 Lce1kJ3QP15 125 aa3.23□□□□□ -1.89
Pdgfrb-201ENSMUST00000025522 Syne2Q6ZWQ0 6874 aaKnown RBP3.22□□□□□ -1.89
Pdgfrb-201ENSMUST00000025522 Ubr4A2AN08 5180 aa3.2□□□□□ -1.9
Pdgfrb-201ENSMUST00000025522 Lce1a1Q9CQH5 143 aa3.17□□□□□ -1.9
Pdgfrb-201ENSMUST00000025522 Sprr2dO70555 85 aa3.16□□□□□ -1.9
Pdgfrb-201ENSMUST00000025522 Krtap31-1Q9D644 177 aa3.15□□□□□ -1.9
Pdgfrb-201ENSMUST00000025522 Ush2AQ2QI47 5193 aa3.14□□□□□ -1.91
Pdgfrb-201ENSMUST00000025522 Krtap31-2Q8CAY5 177 aa3.14□□□□□ -1.91
Pdgfrb-201ENSMUST00000025522 Rnf213E9Q555 5152 aaKnown RBP3.1□□□□□ -1.91
Pdgfrb-201ENSMUST00000025522 Krtap17-1A2A5X6 109 aa3.09□□□□□ -1.91
Pdgfrb-201ENSMUST00000025522 Hmcn2A2AJ76 5100 aa3.05□□□□□ -1.92
Pdgfrb-201ENSMUST00000025522 Syne1Q6ZWR6 8799 aa3.04□□□□□ -1.92
Pdgfrb-201ENSMUST00000025522 SspoQ8CG65 4998 aa3.02□□□□□ -1.93
Pdgfrb-201ENSMUST00000025522 Eppk1Q8R0W0 6548 aa3.01□□□□□ -1.93
Pdgfrb-201ENSMUST00000025522 Gm11554B1AQB2 190 aa2.95□□□□□ -1.94
Pdgfrb-201ENSMUST00000025522 Mt1P02802 61 aaKnown RBP2.93□□□□□ -1.94
Pdgfrb-201ENSMUST00000025522 Fsip2A2ARZ3 6995 aa2.93□□□□□ -1.94
Pdgfrb-201ENSMUST00000025522 Krtap20-2E9Q0A8 60 aa2.86□□□□□ -1.95
Pdgfrb-201ENSMUST00000025522 Sprr2bO70554 98 aa2.84□□□□□ -1.95
Pdgfrb-201ENSMUST00000025522 Krtap4-16Q91W93 202 aa2.8□□□□□ -1.96
Pdgfrb-201ENSMUST00000025522 Gm11555B1AQ89 175 aa2.74□□□□□ -1.97
Pdgfrb-201ENSMUST00000025522 ObscnA2AAJ9 8891 aaKnown RBP2.58□□□□□ -2
Pdgfrb-201ENSMUST00000025522 Kmt2dQ6PDK2 5588 aa2.47□□□□□ -2.01
Pdgfrb-201ENSMUST00000025522 Gm11559Q9D3H7 191 aa2.42□□□□□ -2.02
Pdgfrb-201ENSMUST00000025522 DstQ91ZU6 7393 aaKnown RBP2.42□□□□□ -2.02
Pdgfrb-201ENSMUST00000025522 Muc16A0A140LJ72 8478 aa2.42□□□□□ -2.02
Pdgfrb-201ENSMUST00000025522 1110025L11RikO09048 78 aa2.39□□□□□ -2.03
Pdgfrb-201ENSMUST00000025522 Krtap6-5Q925H3 78 aa2.39□□□□□ -2.03
Pdgfrb-201ENSMUST00000025522 Macf1Q9QXZ0 7354 aaKnown RBP2.33□□□□□ -2.04
Pdgfrb-201ENSMUST00000025522 NebE9Q1W3 7152 aa2.28□□□□□ -2.04
Pdgfrb-201ENSMUST00000025522 Gm10229O08631 77 aa2.28□□□□□ -2.05
Pdgfrb-201ENSMUST00000025522 Gpr98Q8VHN7 6298 aaKnown RBP2.26□□□□□ -2.05
Pdgfrb-201ENSMUST00000025522 Gm11568A2A4M2 211 aa2.25□□□□□ -2.05
Pdgfrb-201ENSMUST00000025522 Krtap9-1Q64526 186 aa2.25□□□□□ -2.05
Pdgfrb-201ENSMUST00000025522 Gm11639A0A1D5RLM8 5808 aa2.22□□□□□ -2.05
Pdgfrb-201ENSMUST00000025522 Krtap5-2Q9D5Z7 189 aa2.12□□□□□ -2.07
Pdgfrb-201ENSMUST00000025522 Phgr1Q8K0G7 91 aa2.05□□□□□ -2.08
Pdgfrb-201ENSMUST00000025522 Gm4553A0A1B0GSA9 284 aa2.03□□□□□ -2.08
Pdgfrb-201ENSMUST00000025522 Muc19Q6PZE0 7524 aa2.01□□□□□ -2.09
Pdgfrb-201ENSMUST00000025522 A030005L19RikA0A1Y7VIU2 113 aa1.95□□□□□ -2.1
Pdgfrb-201ENSMUST00000025522 Hmcn1D3YXG0 5634 aa1.91□□□□□ -2.1
Pdgfrb-201ENSMUST00000025522 Gm2431E9Q8S1 172 aa1.86□□□□□ -2.11
Pdgfrb-201ENSMUST00000025522 Krtap6-2O08884 159 aa1.83□□□□□ -2.12
Pdgfrb-201ENSMUST00000025522 AhnakE9Q616 5656 aaKnown RBP1.81□□□□□ -2.12
Pdgfrb-201ENSMUST00000025522 Gm45337A0A1B0GS71 263 aa1.74□□□□□ -2.13
Pdgfrb-201ENSMUST00000025522 Gm40460A0A1B0GR10 244 aa1.74□□□□□ -2.13
Pdgfrb-201ENSMUST00000025522 Gm7579A0A1B0GRJ4 243 aa1.74□□□□□ -2.13
Pdgfrb-201ENSMUST00000025522 Krtap5-5Q2TA51 241 aa1.74□□□□□ -2.13
Pdgfrb-201ENSMUST00000025522 Krtap5-4Q62220 223 aa1.74□□□□□ -2.13
Pdgfrb-201ENSMUST00000025522 Gm10153A0A1B0GRL1 320 aa1.73□□□□□ -2.13
Pdgfrb-201ENSMUST00000025522 A0A1Y7VLE6 161 aa1.67□□□□□ -2.14
Pdgfrb-201ENSMUST00000025522 Gm11567Q9D141 195 aa1.66□□□□□ -2.14
Pdgfrb-201ENSMUST00000025522 Krtap21-1Q925H4 128 aa1.66□□□□□ -2.14
Pdgfrb-201ENSMUST00000025522 A0A1Y7VJ07 166 aa1.65□□□□□ -2.15
Pdgfrb-201ENSMUST00000025522 Gm39115A0A1B0GSH7 232 aa1.65□□□□□ -2.15
Pdgfrb-201ENSMUST00000025522 A0A1Y7VJH8 109 aa1.61□□□□□ -2.15
Pdgfrb-201ENSMUST00000025522 A030003K21RikA0A1Y7VIM3 128 aa1.51□□□□□ -2.17
Pdgfrb-201ENSMUST00000025522 A030005K14RikA0A1Y7VNY1 122 aa1.49□□□□□ -2.17
Pdgfrb-201ENSMUST00000025522 Gm45618A0A1B0GSA0 219 aa1.45□□□□□ -2.18
Pdgfrb-201ENSMUST00000025522 Gm7544A0A1Y7VJ58 118 aa1.45□□□□□ -2.18
Pdgfrb-201ENSMUST00000025522 A030014E15RikA0A1Y7VJV2 120 aa1.43□□□□□ -2.18
Pdgfrb-201ENSMUST00000025522 Gm6217A0A1Y7VJK9 128 aa1.38□□□□□ -2.19
Pdgfrb-201ENSMUST00000025522 Krtap28-10A0A1Y7VP58 119 aa1.37□□□□□ -2.19
Pdgfrb-201ENSMUST00000025522 Krtap28-13A0A087WQP5 138 aa1.37□□□□□ -2.19
Pdgfrb-201ENSMUST00000025522 Gm29735A0A1B0GT06 219 aa1.32□□□□□ -2.2
Pdgfrb-201ENSMUST00000025522 A0A286YCP9 139 aa1.14□□□□□ -2.23
Pdgfrb-201ENSMUST00000025522 Krtap5-1Q64507 230 aa1.07□□□□□ -2.24
Pdgfrb-201ENSMUST00000025522 Gm4559A4IF42 199 aa0.72□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 84.3 ms