RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Krtap9-3Q3V2C1 136 aa4.17□□□□□ -1.74
Ldb3-202ENSMUST00000022328 Muc5bE9Q5I3 4800 aa4.17□□□□□ -1.74
Ldb3-202ENSMUST00000022328 Gm11569B1AQB1 180 aa4.16□□□□□ -1.74
Ldb3-202ENSMUST00000022328 Mt2P02798 61 aa4.15□□□□□ -1.75
Ldb3-202ENSMUST00000022328 Lce1kJ3QP15 125 aa4.14□□□□□ -1.75
Ldb3-202ENSMUST00000022328 Gm10272F7CZ33 110 aa4.06□□□□□ -1.76
Ldb3-202ENSMUST00000022328 Syne2Q6ZWQ0 6874 aaKnown RBP4.05□□□□□ -1.76
Ldb3-202ENSMUST00000022328 Gm11596B1AQB0 205 aa3.98□□□□□ -1.77
Ldb3-202ENSMUST00000022328 Krtap22-2J3QNX6 67 aa3.9□□□□□ -1.78
Ldb3-202ENSMUST00000022328 4933428G20RikQ9D3X4 101 aa3.88□□□□□ -1.79
Ldb3-202ENSMUST00000022328 Gpr98Q8VHN7 6298 aaKnown RBP3.87□□□□□ -1.79
Ldb3-202ENSMUST00000022328 Sprr2gO70558 76 aa3.87□□□□□ -1.79
Ldb3-202ENSMUST00000022328 Gm11938Q9D3H4 131 aa3.82□□□□□ -1.8
Ldb3-202ENSMUST00000022328 Krtap4-6Q3V4B7 195 aa3.81□□□□□ -1.8
Ldb3-202ENSMUST00000022328 Mt3P28184 68 aa3.79□□□□□ -1.8
Ldb3-202ENSMUST00000022328 Mdn1A2ANY6 5589 aaKnown RBP3.77□□□□□ -1.81
Ldb3-202ENSMUST00000022328 Sprr2dO70555 85 aa3.76□□□□□ -1.81
Ldb3-202ENSMUST00000022328 Gm11564A2A4L9 201 aa3.7□□□□□ -1.82
Ldb3-202ENSMUST00000022328 Gm11595B1AQA7 289 aa3.7□□□□□ -1.82
Ldb3-202ENSMUST00000022328 Krtap4-8B1AQA8 209 aa3.7□□□□□ -1.82
Ldb3-202ENSMUST00000022328 Lce1fB9EJP6 147 aa3.69□□□□□ -1.82
Ldb3-202ENSMUST00000022328 Lce1cQ9D1C5 147 aa3.66□□□□□ -1.82
Ldb3-202ENSMUST00000022328 Krtap9-1Q64526 186 aa3.64□□□□□ -1.83
Ldb3-202ENSMUST00000022328 Krtap6-3A0A087WQL6 57 aa3.61□□□□□ -1.83
Ldb3-202ENSMUST00000022328 Krtap4-9B1AQA9 244 aa3.56□□□□□ -1.84
Ldb3-202ENSMUST00000022328 Sprr2iO70560 76 aa3.54□□□□□ -1.84
Ldb3-202ENSMUST00000022328 Krtap19-4Q925H7 84 aa3.52□□□□□ -1.85
Ldb3-202ENSMUST00000022328 Gm45618A0A1B0GSA0 219 aa3.51□□□□□ -1.85
Ldb3-202ENSMUST00000022328 Hmcn1D3YXG0 5634 aa3.48□□□□□ -1.85
Ldb3-202ENSMUST00000022328 Mt4P47945 62 aa3.45□□□□□ -1.86
Ldb3-202ENSMUST00000022328 Lce3bQ9CQM7 98 aa3.45□□□□□ -1.86
Ldb3-202ENSMUST00000022328 Syne1Q6ZWR6 8799 aa3.43□□□□□ -1.86
Ldb3-202ENSMUST00000022328 Gm11554B1AQB2 190 aa3.43□□□□□ -1.86
Ldb3-202ENSMUST00000022328 Gm2431E9Q8S1 172 aa3.42□□□□□ -1.86
Ldb3-202ENSMUST00000022328 Krtap4-13Q9D7P3 165 aa3.41□□□□□ -1.86
Ldb3-202ENSMUST00000022328 Sprr2kO70562 68 aa3.38□□□□□ -1.87
Ldb3-202ENSMUST00000022328 Fsip2A2ARZ3 6995 aa3.37□□□□□ -1.87
Ldb3-202ENSMUST00000022328 Gm39115A0A1B0GSH7 232 aa3.36□□□□□ -1.87
Ldb3-202ENSMUST00000022328 Sprr2fO70557 76 aa3.34□□□□□ -1.87
Ldb3-202ENSMUST00000022328 Krtap20-2E9Q0A8 60 aa3.33□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Sprr2eO70556 76 aa3.33□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Sprr2hO70559 108 aa3.32□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Lce3cQ91V05 98 aa3.31□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Gm11567Q9D141 195 aa3.31□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Gm29735A0A1B0GT06 219 aa3.3□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Lce3dE9Q8V1 98 aa3.3□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Eppk1Q8R0W0 6548 aa3.29□□□□□ -1.88
Ldb3-202ENSMUST00000022328 Lce3eF8VQJ0 98 aa3.27□□□□□ -1.89
Ldb3-202ENSMUST00000022328 Lce3fQ6PAI4 98 aa3.27□□□□□ -1.89
Ldb3-202ENSMUST00000022328 Lce3aQ497I5 98 aa3.19□□□□□ -1.9
Ldb3-202ENSMUST00000022328 ObscnA2AAJ9 8891 aaKnown RBP3.18□□□□□ -1.9
Ldb3-202ENSMUST00000022328 Mt1P02802 61 aaKnown RBP3.16□□□□□ -1.9
Ldb3-202ENSMUST00000022328 Krtap4-16Q91W93 202 aa3.1□□□□□ -1.91
Ldb3-202ENSMUST00000022328 Gm11568A2A4M2 211 aa3.04□□□□□ -1.92
Ldb3-202ENSMUST00000022328 Gm11639A0A1D5RLM8 5808 aa3.01□□□□□ -1.93
Ldb3-202ENSMUST00000022328 Krtap5-2Q9D5Z7 189 aa3□□□□□ -1.93
Ldb3-202ENSMUST00000022328 Gm10153A0A1B0GRL1 320 aa2.95□□□□□ -1.94
Ldb3-202ENSMUST00000022328 Kmt2dQ6PDK2 5588 aa2.88□□□□□ -1.95
Ldb3-202ENSMUST00000022328 Gm4553A0A1B0GSA9 284 aa2.86□□□□□ -1.95
Ldb3-202ENSMUST00000022328 Krtap5-4Q62220 223 aa2.86□□□□□ -1.95
Ldb3-202ENSMUST00000022328 Gm45337A0A1B0GS71 263 aa2.84□□□□□ -1.96
Ldb3-202ENSMUST00000022328 Gm10024A0A0A0MQA4 119 aa2.8□□□□□ -1.96
Ldb3-202ENSMUST00000022328 Macf1Q9QXZ0 7354 aaKnown RBP2.69□□□□□ -1.98
Ldb3-202ENSMUST00000022328 Gm40460A0A1B0GR10 244 aa2.66□□□□□ -1.98
Ldb3-202ENSMUST00000022328 Gm7579A0A1B0GRJ4 243 aa2.66□□□□□ -1.98
Ldb3-202ENSMUST00000022328 Krtap5-5Q2TA51 241 aa2.66□□□□□ -1.98
Ldb3-202ENSMUST00000022328 Muc19Q6PZE0 7524 aa2.62□□□□□ -1.99
Ldb3-202ENSMUST00000022328 DstQ91ZU6 7393 aaKnown RBP2.6□□□□□ -1.99
Ldb3-202ENSMUST00000022328 Muc16A0A140LJ72 8478 aa2.53□□□□□ -2
Ldb3-202ENSMUST00000022328 Gm4559A4IF42 199 aa2.52□□□□□ -2.01
Ldb3-202ENSMUST00000022328 Gm10229O08631 77 aa2.51□□□□□ -2.01
Ldb3-202ENSMUST00000022328 NebE9Q1W3 7152 aa2.45□□□□□ -2.02
Ldb3-202ENSMUST00000022328 1110025L11RikO09048 78 aa2.42□□□□□ -2.02
Ldb3-202ENSMUST00000022328 Krtap6-5Q925H3 78 aa2.42□□□□□ -2.02
Ldb3-202ENSMUST00000022328 AhnakE9Q616 5656 aaKnown RBP2.38□□□□□ -2.03
Ldb3-202ENSMUST00000022328 Krtap5-1Q64507 230 aa2.28□□□□□ -2.04
Ldb3-202ENSMUST00000022328 Sprr2bO70554 98 aa2.22□□□□□ -2.05
Ldb3-202ENSMUST00000022328 Krtap21-1Q925H4 128 aa1.99□□□□□ -2.09
Ldb3-202ENSMUST00000022328 Phgr1Q8K0G7 91 aa1.94□□□□□ -2.1
Ldb3-202ENSMUST00000022328 Krtap6-2O08884 159 aa1.8□□□□□ -2.12
Retrieved 80 of 22,080 RNA–protein pairs in 75.3 ms