RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 4932415D10RikA0A1W2P6U8 4986 aa3.77□□□□□ -1.81
Ldb3-201ENSMUST00000022327 Abca13Q5SSE9 5034 aa3.76□□□□□ -1.81
Ldb3-201ENSMUST00000022327 Sprr2fO70557 76 aa3.76□□□□□ -1.81
Ldb3-201ENSMUST00000022327 Mt4P47945 62 aa3.75□□□□□ -1.81
Ldb3-201ENSMUST00000022327 Fat4Q2PZL6 4981 aa3.74□□□□□ -1.81
Ldb3-201ENSMUST00000022327 ZanO88799 5376 aa3.74□□□□□ -1.81
Ldb3-201ENSMUST00000022327 Sprr2hO70559 108 aa3.72□□□□□ -1.81
Ldb3-201ENSMUST00000022327 Krtap4-6Q3V4B7 195 aa3.7□□□□□ -1.82
Ldb3-201ENSMUST00000022327 Krtap4-2B1AQ85 167 aa3.69□□□□□ -1.82
Ldb3-201ENSMUST00000022327 Syne1Q6ZWR6 8799 aa3.68□□□□□ -1.82
Ldb3-201ENSMUST00000022327 Gm11555B1AQ89 175 aa3.68□□□□□ -1.82
Ldb3-201ENSMUST00000022327 Hmcn2A2AJ76 5100 aa3.66□□□□□ -1.82
Ldb3-201ENSMUST00000022327 Gm7544A0A1Y7VJ58 118 aa3.65□□□□□ -1.83
Ldb3-201ENSMUST00000022327 Gm11938Q9D3H4 131 aa3.65□□□□□ -1.83
Ldb3-201ENSMUST00000022327 Gm11562A0PK51 136 aa3.65□□□□□ -1.83
Ldb3-201ENSMUST00000022327 A030005K14RikA0A1Y7VNY1 122 aa3.62□□□□□ -1.83
Ldb3-201ENSMUST00000022327 Krtap28-13A0A087WQP5 138 aa3.6□□□□□ -1.83
Ldb3-201ENSMUST00000022327 Muc5bE9Q5I3 4800 aa3.59□□□□□ -1.84
Ldb3-201ENSMUST00000022327 A030005L19RikA0A1Y7VIU2 113 aa3.57□□□□□ -1.84
Ldb3-201ENSMUST00000022327 A0A1Y7VJ07 166 aa3.56□□□□□ -1.84
Ldb3-201ENSMUST00000022327 Krtap17-1A2A5X6 109 aa3.54□□□□□ -1.84
Ldb3-201ENSMUST00000022327 Rnf213E9Q555 5152 aaKnown RBP3.53□□□□□ -1.84
Ldb3-201ENSMUST00000022327 Gm11596B1AQB0 205 aa3.5□□□□□ -1.85
Ldb3-201ENSMUST00000022327 Gm11564A2A4L9 201 aa3.5□□□□□ -1.85
Ldb3-201ENSMUST00000022327 Gm11595B1AQA7 289 aa3.5□□□□□ -1.85
Ldb3-201ENSMUST00000022327 Krtap4-8B1AQA8 209 aa3.5□□□□□ -1.85
Ldb3-201ENSMUST00000022327 2300003K06RikA2A4M0 262 aa3.49□□□□□ -1.85
Ldb3-201ENSMUST00000022327 Krtap4-9B1AQA9 244 aa3.47□□□□□ -1.85
Ldb3-201ENSMUST00000022327 Ush2AQ2QI47 5193 aa3.46□□□□□ -1.86
Ldb3-201ENSMUST00000022327 Lce1kJ3QP15 125 aa3.43□□□□□ -1.86
Ldb3-201ENSMUST00000022327 Mt3P28184 68 aa3.41□□□□□ -1.86
Ldb3-201ENSMUST00000022327 Krtap4-13Q9D7P3 165 aa3.36□□□□□ -1.87
Ldb3-201ENSMUST00000022327 SspoQ8CG65 4998 aa3.35□□□□□ -1.87
Ldb3-201ENSMUST00000022327 Mt1P02802 61 aaKnown RBP3.28□□□□□ -1.88
Ldb3-201ENSMUST00000022327 Fsip2A2ARZ3 6995 aa3.25□□□□□ -1.89
Ldb3-201ENSMUST00000022327 Krtap4-16Q91W93 202 aa3.22□□□□□ -1.89
Ldb3-201ENSMUST00000022327 Gm11559Q9D3H7 191 aa3.22□□□□□ -1.89
Ldb3-201ENSMUST00000022327 Syne2Q6ZWQ0 6874 aaKnown RBP3.2□□□□□ -1.9
Ldb3-201ENSMUST00000022327 Krtap6-3A0A087WQL6 57 aa3.16□□□□□ -1.9
Ldb3-201ENSMUST00000022327 A030014E15RikA0A1Y7VJV2 120 aa3.15□□□□□ -1.91
Ldb3-201ENSMUST00000022327 Lce1a1Q9CQH5 143 aa3.14□□□□□ -1.91
Ldb3-201ENSMUST00000022327 ObscnA2AAJ9 8891 aaKnown RBP3.12□□□□□ -1.91
Ldb3-201ENSMUST00000022327 Muc16A0A140LJ72 8478 aa3.03□□□□□ -1.93
Ldb3-201ENSMUST00000022327 Sprr2bO70554 98 aa3.01□□□□□ -1.93
Ldb3-201ENSMUST00000022327 Krtap20-2E9Q0A8 60 aa2.99□□□□□ -1.93
Ldb3-201ENSMUST00000022327 Gm11554B1AQB2 190 aa2.98□□□□□ -1.93
Ldb3-201ENSMUST00000022327 Eppk1Q8R0W0 6548 aa2.84□□□□□ -1.95
Ldb3-201ENSMUST00000022327 Macf1Q9QXZ0 7354 aaKnown RBP2.76□□□□□ -1.97
Ldb3-201ENSMUST00000022327 Kmt2dQ6PDK2 5588 aa2.76□□□□□ -1.97
Ldb3-201ENSMUST00000022327 DstQ91ZU6 7393 aaKnown RBP2.67□□□□□ -1.98
Ldb3-201ENSMUST00000022327 1110025L11RikO09048 78 aa2.64□□□□□ -1.99
Ldb3-201ENSMUST00000022327 Krtap6-5Q925H3 78 aa2.64□□□□□ -1.99
Ldb3-201ENSMUST00000022327 A0A286YCP9 139 aa2.55□□□□□ -2
Ldb3-201ENSMUST00000022327 NebE9Q1W3 7152 aa2.53□□□□□ -2
Ldb3-201ENSMUST00000022327 Gm10229O08631 77 aa2.47□□□□□ -2.01
Ldb3-201ENSMUST00000022327 Gm11568A2A4M2 211 aa2.47□□□□□ -2.01
Ldb3-201ENSMUST00000022327 Krtap9-1Q64526 186 aa2.47□□□□□ -2.01
Ldb3-201ENSMUST00000022327 Gm11639A0A1D5RLM8 5808 aa2.38□□□□□ -2.03
Ldb3-201ENSMUST00000022327 Muc19Q6PZE0 7524 aa2.38□□□□□ -2.03
Ldb3-201ENSMUST00000022327 Phgr1Q8K0G7 91 aa2.28□□□□□ -2.04
Ldb3-201ENSMUST00000022327 Krtap5-2Q9D5Z7 189 aa2.28□□□□□ -2.04
Ldb3-201ENSMUST00000022327 Gpr98Q8VHN7 6298 aaKnown RBP2.27□□□□□ -2.05
Ldb3-201ENSMUST00000022327 Hmcn1D3YXG0 5634 aa2.16□□□□□ -2.06
Ldb3-201ENSMUST00000022327 Gm4553A0A1B0GSA9 284 aa2.14□□□□□ -2.07
Ldb3-201ENSMUST00000022327 Krtap6-2O08884 159 aa2□□□□□ -2.09
Ldb3-201ENSMUST00000022327 Gm10153A0A1B0GRL1 320 aa1.98□□□□□ -2.09
Ldb3-201ENSMUST00000022327 Gm2431E9Q8S1 172 aa1.97□□□□□ -2.09
Ldb3-201ENSMUST00000022327 AhnakE9Q616 5656 aaKnown RBP1.96□□□□□ -2.1
Ldb3-201ENSMUST00000022327 Krtap21-1Q925H4 128 aa1.9□□□□□ -2.1
Ldb3-201ENSMUST00000022327 Gm45337A0A1B0GS71 263 aa1.89□□□□□ -2.11
Ldb3-201ENSMUST00000022327 Gm11567Q9D141 195 aa1.89□□□□□ -2.11
Ldb3-201ENSMUST00000022327 Gm40460A0A1B0GR10 244 aa1.89□□□□□ -2.11
Ldb3-201ENSMUST00000022327 Gm7579A0A1B0GRJ4 243 aa1.89□□□□□ -2.11
Ldb3-201ENSMUST00000022327 Krtap5-5Q2TA51 241 aa1.89□□□□□ -2.11
Ldb3-201ENSMUST00000022327 Krtap5-4Q62220 223 aa1.89□□□□□ -2.11
Ldb3-201ENSMUST00000022327 Gm45618A0A1B0GSA0 219 aa1.84□□□□□ -2.12
Ldb3-201ENSMUST00000022327 Gm39115A0A1B0GSH7 232 aa1.71□□□□□ -2.14
Ldb3-201ENSMUST00000022327 Gm29735A0A1B0GT06 219 aa1.57□□□□□ -2.16
Ldb3-201ENSMUST00000022327 Krtap5-1Q64507 230 aa1.29□□□□□ -2.2
Ldb3-201ENSMUST00000022327 Gm4559A4IF42 199 aa1.17□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 23.8 ms