RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Syne2Q6ZWQ0 6874 aaKnown RBP2.81□□□□□ -1.96
Ssr1-201ENSMUST00000021864 Gm11564A2A4L9 201 aa2.8□□□□□ -1.96
Ssr1-201ENSMUST00000021864 Gm11563B1AQ90 168 aa2.8□□□□□ -1.96
Ssr1-201ENSMUST00000021864 Gm11595B1AQA7 289 aa2.8□□□□□ -1.96
Ssr1-201ENSMUST00000021864 Krtap4-8B1AQA8 209 aa2.8□□□□□ -1.96
Ssr1-201ENSMUST00000021864 Hmcn2A2AJ76 5100 aa2.8□□□□□ -1.96
Ssr1-201ENSMUST00000021864 Lce1eQ9D139 143 aa2.8□□□□□ -1.96
Ssr1-201ENSMUST00000021864 Krtap17-1A2A5X6 109 aa2.77□□□□□ -1.97
Ssr1-201ENSMUST00000021864 Krtap4-9B1AQA9 244 aa2.75□□□□□ -1.97
Ssr1-201ENSMUST00000021864 Krtap19-4Q925H7 84 aa2.72□□□□□ -1.97
Ssr1-201ENSMUST00000021864 2300003K06RikA2A4M0 262 aa2.67□□□□□ -1.98
Ssr1-201ENSMUST00000021864 Krtap4-13Q9D7P3 165 aa2.66□□□□□ -1.98
Ssr1-201ENSMUST00000021864 Lce1a2Q9D1K4 149 aa2.66□□□□□ -1.98
Ssr1-201ENSMUST00000021864 Krtap4-7Q9D732 168 aa2.66□□□□□ -1.98
Ssr1-201ENSMUST00000021864 SspoQ8CG65 4998 aa2.64□□□□□ -1.99
Ssr1-201ENSMUST00000021864 Krtap31-2Q8CAY5 177 aa2.63□□□□□ -1.99
Ssr1-201ENSMUST00000021864 Fsip2A2ARZ3 6995 aa2.62□□□□□ -1.99
Ssr1-201ENSMUST00000021864 Krtap6-3A0A087WQL6 57 aa2.61□□□□□ -1.99
Ssr1-201ENSMUST00000021864 Sprr2hO70559 108 aa2.53□□□□□ -2
Ssr1-201ENSMUST00000021864 Lce1a1Q9CQH5 143 aa2.5□□□□□ -2.01
Ssr1-201ENSMUST00000021864 Krtap31-1Q9D644 177 aa2.48□□□□□ -2.01
Ssr1-201ENSMUST00000021864 Lce1kJ3QP15 125 aa2.47□□□□□ -2.01
Ssr1-201ENSMUST00000021864 Sprr2dO70555 85 aa2.47□□□□□ -2.01
Ssr1-201ENSMUST00000021864 A0A1Y7VLE6 161 aa2.47□□□□□ -2.01
Ssr1-201ENSMUST00000021864 Eppk1Q8R0W0 6548 aa2.46□□□□□ -2.02
Ssr1-201ENSMUST00000021864 Gm11555B1AQ89 175 aa2.44□□□□□ -2.02
Ssr1-201ENSMUST00000021864 Gm11938Q9D3H4 131 aa2.42□□□□□ -2.02
Ssr1-201ENSMUST00000021864 Mt3P28184 68 aa2.38□□□□□ -2.03
Ssr1-201ENSMUST00000021864 Gm11554B1AQB2 190 aa2.34□□□□□ -2.04
Ssr1-201ENSMUST00000021864 Krtap20-2E9Q0A8 60 aa2.3□□□□□ -2.04
Ssr1-201ENSMUST00000021864 A030003K21RikA0A1Y7VIM3 128 aa2.28□□□□□ -2.04
Ssr1-201ENSMUST00000021864 Sprr2bO70554 98 aa2.27□□□□□ -2.05
Ssr1-201ENSMUST00000021864 Macf1Q9QXZ0 7354 aaKnown RBP2.18□□□□□ -2.06
Ssr1-201ENSMUST00000021864 Syne1Q6ZWR6 8799 aa2.18□□□□□ -2.06
Ssr1-201ENSMUST00000021864 Mt1P02802 61 aaKnown RBP2.16□□□□□ -2.06
Ssr1-201ENSMUST00000021864 A0A1Y7VJH8 109 aa2.16□□□□□ -2.06
Ssr1-201ENSMUST00000021864 Gm6217A0A1Y7VJK9 128 aa2.15□□□□□ -2.06
Ssr1-201ENSMUST00000021864 Krtap28-10A0A1Y7VP58 119 aa2.13□□□□□ -2.07
Ssr1-201ENSMUST00000021864 Krtap4-16Q91W93 202 aa2.11□□□□□ -2.07
Ssr1-201ENSMUST00000021864 Kmt2dQ6PDK2 5588 aa2.1□□□□□ -2.07
Ssr1-201ENSMUST00000021864 DstQ91ZU6 7393 aaKnown RBP2.1□□□□□ -2.07
Ssr1-201ENSMUST00000021864 Gpr98Q8VHN7 6298 aaKnown RBP2.09□□□□□ -2.07
Ssr1-201ENSMUST00000021864 A030005K14RikA0A1Y7VNY1 122 aa2.09□□□□□ -2.08
Ssr1-201ENSMUST00000021864 Krtap28-13A0A087WQP5 138 aa2.08□□□□□ -2.08
Ssr1-201ENSMUST00000021864 A0A1Y7VJ07 166 aa2.08□□□□□ -2.08
Ssr1-201ENSMUST00000021864 NebE9Q1W3 7152 aa2.07□□□□□ -2.08
Ssr1-201ENSMUST00000021864 ObscnA2AAJ9 8891 aaKnown RBP2.02□□□□□ -2.09
Ssr1-201ENSMUST00000021864 Gm11559Q9D3H7 191 aa2□□□□□ -2.09
Ssr1-201ENSMUST00000021864 Gm7544A0A1Y7VJ58 118 aa2□□□□□ -2.09
Ssr1-201ENSMUST00000021864 Gm11639A0A1D5RLM8 5808 aa2□□□□□ -2.09
Ssr1-201ENSMUST00000021864 A030005L19RikA0A1Y7VIU2 113 aa1.94□□□□□ -2.1
Ssr1-201ENSMUST00000021864 A030014E15RikA0A1Y7VJV2 120 aa1.92□□□□□ -2.1
Ssr1-201ENSMUST00000021864 Gm11568A2A4M2 211 aa1.89□□□□□ -2.11
Ssr1-201ENSMUST00000021864 Krtap9-1Q64526 186 aa1.89□□□□□ -2.11
Ssr1-201ENSMUST00000021864 Muc16A0A140LJ72 8478 aa1.87□□□□□ -2.11
Ssr1-201ENSMUST00000021864 Hmcn1D3YXG0 5634 aa1.84□□□□□ -2.11
Ssr1-201ENSMUST00000021864 Krtap5-2Q9D5Z7 189 aa1.84□□□□□ -2.12
Ssr1-201ENSMUST00000021864 Gm4553A0A1B0GSA9 284 aa1.76□□□□□ -2.13
Ssr1-201ENSMUST00000021864 1110025L11RikO09048 78 aa1.74□□□□□ -2.13
Ssr1-201ENSMUST00000021864 Krtap6-5Q925H3 78 aa1.74□□□□□ -2.13
Ssr1-201ENSMUST00000021864 Muc19Q6PZE0 7524 aa1.72□□□□□ -2.13
Ssr1-201ENSMUST00000021864 Gm10229O08631 77 aa1.7□□□□□ -2.14
Ssr1-201ENSMUST00000021864 AhnakE9Q616 5656 aaKnown RBP1.68□□□□□ -2.14
Ssr1-201ENSMUST00000021864 Gm2431E9Q8S1 172 aa1.66□□□□□ -2.14
Ssr1-201ENSMUST00000021864 A0A286YCP9 139 aa1.58□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Phgr1Q8K0G7 91 aa1.57□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Gm45337A0A1B0GS71 263 aa1.56□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Gm10153A0A1B0GRL1 320 aa1.54□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Gm40460A0A1B0GR10 244 aa1.54□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Gm7579A0A1B0GRJ4 243 aa1.54□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Krtap5-5Q2TA51 241 aa1.54□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Krtap5-4Q62220 223 aa1.54□□□□□ -2.16
Ssr1-201ENSMUST00000021864 Gm39115A0A1B0GSH7 232 aa1.48□□□□□ -2.17
Ssr1-201ENSMUST00000021864 Krtap6-2O08884 159 aa1.35□□□□□ -2.19
Ssr1-201ENSMUST00000021864 Gm45618A0A1B0GSA0 219 aa1.34□□□□□ -2.19
Ssr1-201ENSMUST00000021864 Gm11567Q9D141 195 aa1.28□□□□□ -2.2
Ssr1-201ENSMUST00000021864 Krtap21-1Q925H4 128 aa1.24□□□□□ -2.21
Ssr1-201ENSMUST00000021864 Gm29735A0A1B0GT06 219 aa1.14□□□□□ -2.23
Ssr1-201ENSMUST00000021864 Krtap5-1Q64507 230 aa0.94□□□□□ -2.26
Ssr1-201ENSMUST00000021864 Gm4559A4IF42 199 aa0.65□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 6.2 ms