RNA–Protein interactions for RNA: ENSMUST00000002412.8

Ncan-201, Transcript of Neurocan core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ncan, Length 7,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ncan-201ENSMUST00000002412 2300003K06RikA2A4M0 262 aa3.47□□□□□ -1.85
Ncan-201ENSMUST00000002412 Krtap4-7Q9D732 168 aa3.43□□□□□ -1.86
Ncan-201ENSMUST00000002412 Krtap4-1Q3UUY3 169 aa3.4□□□□□ -1.86
Ncan-201ENSMUST00000002412 Krtap17-1A2A5X6 109 aa3.4□□□□□ -1.87
Ncan-201ENSMUST00000002412 PcloQ9QYX7 5068 aa3.36□□□□□ -1.87
Ncan-201ENSMUST00000002412 Gm11596B1AQB0 205 aa3.36□□□□□ -1.87
Ncan-201ENSMUST00000002412 Mt3P28184 68 aa3.36□□□□□ -1.87
Ncan-201ENSMUST00000002412 Krtap4-13Q9D7P3 165 aa3.34□□□□□ -1.88
Ncan-201ENSMUST00000002412 Krtap4-9B1AQA9 244 aa3.32□□□□□ -1.88
Ncan-201ENSMUST00000002412 Gm11564A2A4L9 201 aa3.32□□□□□ -1.88
Ncan-201ENSMUST00000002412 Gm11563B1AQ90 168 aa3.32□□□□□ -1.88
Ncan-201ENSMUST00000002412 Gm11595B1AQA7 289 aa3.32□□□□□ -1.88
Ncan-201ENSMUST00000002412 Krtap4-8B1AQA8 209 aa3.32□□□□□ -1.88
Ncan-201ENSMUST00000002412 Hmcn2A2AJ76 5100 aa3.31□□□□□ -1.88
Ncan-201ENSMUST00000002412 Birc6O88738 4882 aa3.3□□□□□ -1.88
Ncan-201ENSMUST00000002412 Abca13Q5SSE9 5034 aa3.24□□□□□ -1.89
Ncan-201ENSMUST00000002412 Gm11554B1AQB2 190 aa3.23□□□□□ -1.89
Ncan-201ENSMUST00000002412 Fsip2A2ARZ3 6995 aa3.22□□□□□ -1.89
Ncan-201ENSMUST00000002412 Mdn1A2ANY6 5589 aaKnown RBP3.22□□□□□ -1.89
Ncan-201ENSMUST00000002412 Syne2Q6ZWQ0 6874 aaKnown RBP3.17□□□□□ -1.9
Ncan-201ENSMUST00000002412 Ubr4A2AN08 5180 aa3.09□□□□□ -1.91
Ncan-201ENSMUST00000002412 ZanO88799 5376 aa3.01□□□□□ -1.93
Ncan-201ENSMUST00000002412 Krtap6-3A0A087WQL6 57 aa3□□□□□ -1.93
Ncan-201ENSMUST00000002412 Mt1P02802 61 aaKnown RBP2.95□□□□□ -1.94
Ncan-201ENSMUST00000002412 Muc16A0A140LJ72 8478 aa2.93□□□□□ -1.94
Ncan-201ENSMUST00000002412 4932415D10RikA0A1W2P6U8 4986 aa2.93□□□□□ -1.94
Ncan-201ENSMUST00000002412 Fat4Q2PZL6 4981 aa2.93□□□□□ -1.94
Ncan-201ENSMUST00000002412 Muc5bE9Q5I3 4800 aa2.9□□□□□ -1.94
Ncan-201ENSMUST00000002412 Rnf213E9Q555 5152 aaKnown RBP2.88□□□□□ -1.95
Ncan-201ENSMUST00000002412 Ush2AQ2QI47 5193 aa2.83□□□□□ -1.96
Ncan-201ENSMUST00000002412 Gm11555B1AQ89 175 aa2.77□□□□□ -1.97
Ncan-201ENSMUST00000002412 Krtap20-2E9Q0A8 60 aa2.75□□□□□ -1.97
Ncan-201ENSMUST00000002412 ObscnA2AAJ9 8891 aaKnown RBP2.7□□□□□ -1.98
Ncan-201ENSMUST00000002412 SspoQ8CG65 4998 aa2.65□□□□□ -1.99
Ncan-201ENSMUST00000002412 Eppk1Q8R0W0 6548 aa2.57□□□□□ -2
Ncan-201ENSMUST00000002412 Phgr1Q8K0G7 91 aa2.57□□□□□ -2
Ncan-201ENSMUST00000002412 Macf1Q9QXZ0 7354 aaKnown RBP2.52□□□□□ -2.01
Ncan-201ENSMUST00000002412 Gm11568A2A4M2 211 aa2.5□□□□□ -2.01
Ncan-201ENSMUST00000002412 Krtap9-1Q64526 186 aa2.5□□□□□ -2.01
Ncan-201ENSMUST00000002412 Gm11559Q9D3H7 191 aa2.5□□□□□ -2.01
Ncan-201ENSMUST00000002412 1110025L11RikO09048 78 aa2.45□□□□□ -2.02
Ncan-201ENSMUST00000002412 Krtap6-5Q925H3 78 aa2.45□□□□□ -2.02
Ncan-201ENSMUST00000002412 NebE9Q1W3 7152 aa2.45□□□□□ -2.02
Ncan-201ENSMUST00000002412 Gm10229O08631 77 aa2.41□□□□□ -2.02
Ncan-201ENSMUST00000002412 Gm11567Q9D141 195 aa2.38□□□□□ -2.03
Ncan-201ENSMUST00000002412 Muc19Q6PZE0 7524 aa2.35□□□□□ -2.03
Ncan-201ENSMUST00000002412 DstQ91ZU6 7393 aaKnown RBP2.29□□□□□ -2.04
Ncan-201ENSMUST00000002412 Kmt2dQ6PDK2 5588 aa2.1□□□□□ -2.07
Ncan-201ENSMUST00000002412 Krtap6-2O08884 159 aa1.84□□□□□ -2.12
Ncan-201ENSMUST00000002412 Gpr98Q8VHN7 6298 aaKnown RBP1.78□□□□□ -2.13
Ncan-201ENSMUST00000002412 Gm11639A0A1D5RLM8 5808 aa1.75□□□□□ -2.13
Ncan-201ENSMUST00000002412 Krtap21-1Q925H4 128 aa1.71□□□□□ -2.14
Ncan-201ENSMUST00000002412 Hmcn1D3YXG0 5634 aa1.71□□□□□ -2.14
Ncan-201ENSMUST00000002412 Krtap5-2Q9D5Z7 189 aa1.69□□□□□ -2.14
Ncan-201ENSMUST00000002412 A0A1Y7VLE6 161 aa1.68□□□□□ -2.14
Ncan-201ENSMUST00000002412 Gm4553A0A1B0GSA9 284 aa1.6□□□□□ -2.15
Ncan-201ENSMUST00000002412 A030003K21RikA0A1Y7VIM3 128 aa1.59□□□□□ -2.15
Ncan-201ENSMUST00000002412 Gm2431E9Q8S1 172 aa1.54□□□□□ -2.16
Ncan-201ENSMUST00000002412 Gm10153A0A1B0GRL1 320 aa1.49□□□□□ -2.17
Ncan-201ENSMUST00000002412 A030005L19RikA0A1Y7VIU2 113 aa1.49□□□□□ -2.17
Ncan-201ENSMUST00000002412 Gm6217A0A1Y7VJK9 128 aa1.47□□□□□ -2.17
Ncan-201ENSMUST00000002412 AhnakE9Q616 5656 aaKnown RBP1.41□□□□□ -2.18
Ncan-201ENSMUST00000002412 Gm45337A0A1B0GS71 263 aa1.39□□□□□ -2.19
Ncan-201ENSMUST00000002412 A030005K14RikA0A1Y7VNY1 122 aa1.38□□□□□ -2.19
Ncan-201ENSMUST00000002412 A0A1Y7VJH8 109 aa1.38□□□□□ -2.19
Ncan-201ENSMUST00000002412 Gm40460A0A1B0GR10 244 aa1.35□□□□□ -2.19
Ncan-201ENSMUST00000002412 Gm7579A0A1B0GRJ4 243 aa1.35□□□□□ -2.19
Ncan-201ENSMUST00000002412 Krtap5-5Q2TA51 241 aa1.35□□□□□ -2.19
Ncan-201ENSMUST00000002412 Krtap5-4Q62220 223 aa1.35□□□□□ -2.19
Ncan-201ENSMUST00000002412 Krtap28-13A0A087WQP5 138 aa1.3□□□□□ -2.2
Ncan-201ENSMUST00000002412 A0A1Y7VJ07 166 aa1.3□□□□□ -2.2
Ncan-201ENSMUST00000002412 Krtap28-10A0A1Y7VP58 119 aa1.28□□□□□ -2.2
Ncan-201ENSMUST00000002412 Gm39115A0A1B0GSH7 232 aa1.25□□□□□ -2.21
Ncan-201ENSMUST00000002412 A030014E15RikA0A1Y7VJV2 120 aa1.22□□□□□ -2.21
Ncan-201ENSMUST00000002412 Gm7544A0A1Y7VJ58 118 aa1.18□□□□□ -2.22
Ncan-201ENSMUST00000002412 A0A286YCP9 139 aa1.11□□□□□ -2.23
Ncan-201ENSMUST00000002412 Gm45618A0A1B0GSA0 219 aa1.08□□□□□ -2.24
Ncan-201ENSMUST00000002412 Gm29735A0A1B0GT06 219 aa1.01□□□□□ -2.25
Ncan-201ENSMUST00000002412 Krtap5-1Q64507 230 aa0.99□□□□□ -2.25
Ncan-201ENSMUST00000002412 Gm4559A4IF42 199 aa0.74□□□□□ -2.29
Retrieved 80 of 22,080 RNA–protein pairs in 127.5 ms