RNA–Protein interactions for RNA: ENSMUST00000001711.5

Hoxc6-201, Transcript of Homeobox protein Hox-C6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc6, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6-201ENSMUST00000001711 Sprr2kO70562 68 aa7.08□□□□□ -1.28
Hoxc6-201ENSMUST00000001711 Krtap6-3A0A087WQL6 57 aa7.06□□□□□ -1.28
Hoxc6-201ENSMUST00000001711 2300003K06RikA2A4M0 262 aa7.01□□□□□ -1.29
Hoxc6-201ENSMUST00000001711 Gm6217A0A1Y7VJK9 128 aa6.93□□□□□ -1.3
Hoxc6-201ENSMUST00000001711 A0A286YCP9 139 aa6.79□□□□□ -1.32
Hoxc6-201ENSMUST00000001711 Krtap7-1Q9D3I6 87 aa6.78□□□□□ -1.32
Hoxc6-201ENSMUST00000001711 Gm40193A0A1B0GT39 78 aa6.7□□□□□ -1.34
Hoxc6-201ENSMUST00000001711 Mp68P56379 58 aa6.69□□□□□ -1.34
Hoxc6-201ENSMUST00000001711 Sprr2gO70558 76 aa6.63□□□□□ -1.35
Hoxc6-201ENSMUST00000001711 Gm20538F6Z9R1 75 aa6.62□□□□□ -1.35
Hoxc6-201ENSMUST00000001711 Tnp1P10856 55 aa6.57□□□□□ -1.36
Hoxc6-201ENSMUST00000001711 Gm10272F7CZ33 110 aa6.51□□□□□ -1.37
Hoxc6-201ENSMUST00000001711 Lce1eQ9D139 143 aa6.48□□□□□ -1.37
Hoxc6-201ENSMUST00000001711 Krtap31-1Q9D644 177 aa6.46□□□□□ -1.38
Hoxc6-201ENSMUST00000001711 Krtap20-2E9Q0A8 60 aa6.45□□□□□ -1.38
Hoxc6-201ENSMUST00000001711 Lce3bQ9CQM7 98 aa6.38□□□□□ -1.39
Hoxc6-201ENSMUST00000001711 Syne1Q6ZWR6 8799 aa6.37□□□□□ -1.39
Hoxc6-201ENSMUST00000001711 Sprr2iO70560 76 aa6.36□□□□□ -1.39
Hoxc6-201ENSMUST00000001711 Lce1kJ3QP15 125 aa6.32□□□□□ -1.4
Hoxc6-201ENSMUST00000001711 Gm11559Q9D3H7 191 aa6.32□□□□□ -1.4
Hoxc6-201ENSMUST00000001711 Krtap5-2Q9D5Z7 189 aa6.31□□□□□ -1.4
Hoxc6-201ENSMUST00000001711 2310046K23RikA0A0A6YVW6 87 aa6.31□□□□□ -1.4
Hoxc6-201ENSMUST00000001711 Ndufaf8A2AMZ4 74 aa6.2□□□□□ -1.42
Hoxc6-201ENSMUST00000001711 Gm11568A2A4M2 211 aa6.12□□□□□ -1.43
Hoxc6-201ENSMUST00000001711 Krtap9-1Q64526 186 aa6.12□□□□□ -1.43
Hoxc6-201ENSMUST00000001711 Gm11938Q9D3H4 131 aa6.1□□□□□ -1.43
Hoxc6-201ENSMUST00000001711 Lce1fB9EJP6 147 aa6.04□□□□□ -1.44
Hoxc6-201ENSMUST00000001711 Lce1cQ9D1C5 147 aa6.04□□□□□ -1.44
Hoxc6-201ENSMUST00000001711 Gm10100J3QK64 120 aa6□□□□□ -1.45
Hoxc6-201ENSMUST00000001711 Gm4553A0A1B0GSA9 284 aa5.97□□□□□ -1.45
Hoxc6-201ENSMUST00000001711 Gm11554B1AQB2 190 aa5.88□□□□□ -1.47
Hoxc6-201ENSMUST00000001711 Mt1P02802 61 aaKnown RBP5.88□□□□□ -1.47
Hoxc6-201ENSMUST00000001711 Lce3cQ91V05 98 aa5.82□□□□□ -1.48
Hoxc6-201ENSMUST00000001711 Macf1Q9QXZ0 7354 aaKnown RBP5.8□□□□□ -1.48
Hoxc6-201ENSMUST00000001711 Gm45337A0A1B0GS71 263 aa5.79□□□□□ -1.48
Hoxc6-201ENSMUST00000001711 Gm2431E9Q8S1 172 aa5.76□□□□□ -1.49
Hoxc6-201ENSMUST00000001711 Gm10153A0A1B0GRL1 320 aa5.74□□□□□ -1.49
Hoxc6-201ENSMUST00000001711 Lce3dE9Q8V1 98 aa5.73□□□□□ -1.49
Hoxc6-201ENSMUST00000001711 Eppk1Q8R0W0 6548 aa5.72□□□□□ -1.49
Hoxc6-201ENSMUST00000001711 Kmt2dQ6PDK2 5588 aa5.69□□□□□ -1.5
Hoxc6-201ENSMUST00000001711 Krtap19-4Q925H7 84 aa5.69□□□□□ -1.5
Hoxc6-201ENSMUST00000001711 Sprr2dO70555 85 aa5.65□□□□□ -1.5
Hoxc6-201ENSMUST00000001711 Lce3eF8VQJ0 98 aa5.62□□□□□ -1.51
Hoxc6-201ENSMUST00000001711 Lce3fQ6PAI4 98 aa5.62□□□□□ -1.51
Hoxc6-201ENSMUST00000001711 Gm40460A0A1B0GR10 244 aa5.59□□□□□ -1.51
Hoxc6-201ENSMUST00000001711 Gm7579A0A1B0GRJ4 243 aa5.59□□□□□ -1.51
Hoxc6-201ENSMUST00000001711 Krtap5-5Q2TA51 241 aa5.59□□□□□ -1.51
Hoxc6-201ENSMUST00000001711 Krtap5-4Q62220 223 aa5.59□□□□□ -1.51
Hoxc6-201ENSMUST00000001711 ObscnA2AAJ9 8891 aaKnown RBP5.55□□□□□ -1.52
Hoxc6-201ENSMUST00000001711 Gm9112A2AI92 75 aa5.52□□□□□ -1.53
Hoxc6-201ENSMUST00000001711 Hmcn1D3YXG0 5634 aa5.49□□□□□ -1.53
Hoxc6-201ENSMUST00000001711 4933428G20RikQ9D3X4 101 aa5.46□□□□□ -1.53
Hoxc6-201ENSMUST00000001711 Gm39115A0A1B0GSH7 232 aa5.41□□□□□ -1.54
Hoxc6-201ENSMUST00000001711 Mt3P28184 68 aa5.39□□□□□ -1.55
Hoxc6-201ENSMUST00000001711 Gm11567Q9D141 195 aa5.38□□□□□ -1.55
Hoxc6-201ENSMUST00000001711 Lce3aQ497I5 98 aa5.38□□□□□ -1.55
Hoxc6-201ENSMUST00000001711 Muc19Q6PZE0 7524 aa5.31□□□□□ -1.56
Hoxc6-201ENSMUST00000001711 Gm11639A0A1D5RLM8 5808 aa5.29□□□□□ -1.56
Hoxc6-201ENSMUST00000001711 Gm45618A0A1B0GSA0 219 aa5.22□□□□□ -1.57
Hoxc6-201ENSMUST00000001711 DstQ91ZU6 7393 aaKnown RBP5.16□□□□□ -1.58
Hoxc6-201ENSMUST00000001711 Gm29735A0A1B0GT06 219 aa5.03□□□□□ -1.6
Hoxc6-201ENSMUST00000001711 Gm10142J3KMP7 120 aa5.03□□□□□ -1.6
Hoxc6-201ENSMUST00000001711 Sprr2fO70557 76 aa5.01□□□□□ -1.61
Hoxc6-201ENSMUST00000001711 Gpr98Q8VHN7 6298 aaKnown RBP4.97□□□□□ -1.61
Hoxc6-201ENSMUST00000001711 Krtap4-16Q91W93 202 aa4.95□□□□□ -1.62
Hoxc6-201ENSMUST00000001711 Sprr2hO70559 108 aa4.87□□□□□ -1.63
Hoxc6-201ENSMUST00000001711 NebE9Q1W3 7152 aa4.85□□□□□ -1.63
Hoxc6-201ENSMUST00000001711 AhnakE9Q616 5656 aaKnown RBP4.81□□□□□ -1.64
Hoxc6-201ENSMUST00000001711 Sprr2eO70556 76 aa4.78□□□□□ -1.64
Hoxc6-201ENSMUST00000001711 Gm10024A0A0A0MQA4 119 aa4.67□□□□□ -1.66
Hoxc6-201ENSMUST00000001711 1110025L11RikO09048 78 aa4.3□□□□□ -1.72
Hoxc6-201ENSMUST00000001711 Krtap6-5Q925H3 78 aa4.3□□□□□ -1.72
Hoxc6-201ENSMUST00000001711 Muc16A0A140LJ72 8478 aa4.14□□□□□ -1.75
Hoxc6-201ENSMUST00000001711 Gm10229O08631 77 aa3.85□□□□□ -1.79
Hoxc6-201ENSMUST00000001711 Krtap5-1Q64507 230 aa3.55□□□□□ -1.84
Hoxc6-201ENSMUST00000001711 Sprr2bO70554 98 aa3.48□□□□□ -1.85
Hoxc6-201ENSMUST00000001711 Krtap21-1Q925H4 128 aa3.48□□□□□ -1.85
Hoxc6-201ENSMUST00000001711 Gm4559A4IF42 199 aa3.47□□□□□ -1.85
Hoxc6-201ENSMUST00000001711 Krtap6-2O08884 159 aa3.38□□□□□ -1.87
Hoxc6-201ENSMUST00000001711 Phgr1Q8K0G7 91 aa2.93□□□□□ -1.94
Retrieved 80 of 22,080 RNA–protein pairs in 100.7 ms