RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Celsr1O35161 3034 aa2.72□□□□□ -1.97
Nck1-201ENSMUST00000112874 Usp9xP70398 2559 aaKnown RBP2.72□□□□□ -1.97
Nck1-201ENSMUST00000112874 NipblQ6KCD5 2798 aaKnown RBP2.71□□□□□ -1.98
Nck1-201ENSMUST00000112874 Defb46Q4QY34 57 aa2.71□□□□□ -1.98
Nck1-201ENSMUST00000112874 PolqQ8CGS6 2544 aa2.71□□□□□ -1.98
Nck1-201ENSMUST00000112874 Prrc2cQ3TLH4 2846 aaKnown RBP2.71□□□□□ -1.98
Nck1-201ENSMUST00000112874 Gm17402F6Z0L5 76 aa2.7□□□□□ -1.98
Nck1-201ENSMUST00000112874 Lama5Q61001 3718 aa2.7□□□□□ -1.98
Nck1-201ENSMUST00000112874 Tex15F8VPN2 2785 aa2.69□□□□□ -1.98
Nck1-201ENSMUST00000112874 Nsd1O88491 2588 aaKnown RBP2.69□□□□□ -1.98
Nck1-201ENSMUST00000112874 Celsr2Q9R0M0 2920 aa2.69□□□□□ -1.98
Nck1-201ENSMUST00000112874 SpenQ62504 3644 aaKnown RBP2.69□□□□□ -1.98
Nck1-201ENSMUST00000112874 Map1aQ9QYR6 2776 aa2.68□□□□□ -1.98
Nck1-201ENSMUST00000112874 Fbn1Q61554 2873 aaKnown RBP2.68□□□□□ -1.98
Nck1-201ENSMUST00000112874 Csmd1Q923L3 3564 aa2.68□□□□□ -1.98
Nck1-201ENSMUST00000112874 FlncQ8VHX6 2726 aaKnown RBP2.68□□□□□ -1.98
Nck1-201ENSMUST00000112874 Hivep1Q03172 2688 aa2.67□□□□□ -1.98
Nck1-201ENSMUST00000112874 Pcnx1Q9QYC1 2344 aa2.65□□□□□ -1.98
Nck1-201ENSMUST00000112874 Vps13dB1ART2 4390 aa2.65□□□□□ -1.98
Nck1-201ENSMUST00000112874 Tenm3Q9WTS6 2715 aa2.65□□□□□ -1.99
Nck1-201ENSMUST00000112874 Akap9Q70FJ1 3797 aa2.64□□□□□ -1.99
Nck1-201ENSMUST00000112874 Col6a5A6H584 2640 aa2.64□□□□□ -1.99
Nck1-201ENSMUST00000112874 Wfdc17Q5SSJ1 76 aa2.63□□□□□ -1.99
Nck1-201ENSMUST00000112874 LystP97412 3788 aa2.61□□□□□ -1.99
Nck1-201ENSMUST00000112874 Itpr2Q9Z329 2701 aa2.6□□□□□ -1.99
Nck1-201ENSMUST00000112874 Vps13cQ8BX70 3748 aa2.6□□□□□ -1.99
Nck1-201ENSMUST00000112874 Gm9195A0A140LHT4 2805 aa2.6□□□□□ -1.99
Nck1-201ENSMUST00000112874 Ros1Q78DX7 2340 aa2.59□□□□□ -1.99
Nck1-201ENSMUST00000112874 Sprr2iO70560 76 aa2.58□□□□□ -2
Nck1-201ENSMUST00000112874 Csmd2V9GX34 3611 aa2.58□□□□□ -2
Nck1-201ENSMUST00000112874 FlnaQ8BTM8 2647 aaKnown RBP2.58□□□□□ -2
Nck1-201ENSMUST00000112874 Srrm2Q8BTI8 2703 aaKnown RBP2.58□□□□□ -2
Nck1-201ENSMUST00000112874 FasnP19096 2504 aaKnown RBP2.58□□□□□ -2
Nck1-201ENSMUST00000112874 2310046K23RikA0A0A6YVW6 87 aa2.58□□□□□ -2
Nck1-201ENSMUST00000112874 Defb5Q9EPV9 64 aa2.58□□□□□ -2
Nck1-201ENSMUST00000112874 Pdzd2E9Q1M1 2796 aa2.57□□□□□ -2
Nck1-201ENSMUST00000112874 Adgrg4B7ZCC9 3073 aa2.57□□□□□ -2
Nck1-201ENSMUST00000112874 Nf1Q04690 2841 aa2.56□□□□□ -2
Nck1-201ENSMUST00000112874 Cmya5Q70KF4 3739 aa2.56□□□□□ -2
Nck1-201ENSMUST00000112874 Stab1Q8R4Y4 2571 aa2.53□□□□□ -2
Nck1-201ENSMUST00000112874 Gm884A2A9H6 3643 aa2.52□□□□□ -2.01
Nck1-201ENSMUST00000112874 Muc4Q8JZM8 3443 aa2.51□□□□□ -2.01
Nck1-201ENSMUST00000112874 Tff3Q62395 81 aa2.51□□□□□ -2.01
Nck1-201ENSMUST00000112874 Gm9918Q8BUR5 174 aa2.51□□□□□ -2.01
Nck1-201ENSMUST00000112874 Nbeal2Q6ZQA0 2742 aa2.51□□□□□ -2.01
Nck1-201ENSMUST00000112874 OtogO55225 2910 aa2.5□□□□□ -2.01
Nck1-201ENSMUST00000112874 Ank2Q8C8R3 3898 aa2.49□□□□□ -2.01
Nck1-201ENSMUST00000112874 BC067074F6RXI4 2391 aa2.49□□□□□ -2.01
Nck1-201ENSMUST00000112874 Spink7Q6IE32 76 aa2.48□□□□□ -2.01
Nck1-201ENSMUST00000112874 Tenm1Q9WTS4 2731 aa2.48□□□□□ -2.01
Nck1-201ENSMUST00000112874 VwfQ8CIZ8 2813 aa2.47□□□□□ -2.01
Nck1-201ENSMUST00000112874 Svep1A2AVA0 3567 aa2.47□□□□□ -2.01
Nck1-201ENSMUST00000112874 ApcQ61315 2845 aa2.46□□□□□ -2.01
Nck1-201ENSMUST00000112874 Muc6Q80T03 2850 aa2.46□□□□□ -2.02
Nck1-201ENSMUST00000112874 Notch1Q01705 2531 aa2.42□□□□□ -2.02
Nck1-201ENSMUST00000112874 Krtap6-5Q925H3 78 aa2.42□□□□□ -2.02
Nck1-201ENSMUST00000112874 Crct1Q6PAI5 102 aa2.41□□□□□ -2.02
Nck1-201ENSMUST00000112874 Gm10024A0A0A0MQA4 119 aa2.4□□□□□ -2.03
Nck1-201ENSMUST00000112874 Gpr15lA0A0B4J1N3 78 aa2.4□□□□□ -2.03
Nck1-201ENSMUST00000112874 Sprr2fO70557 76 aa2.4□□□□□ -2.03
Nck1-201ENSMUST00000112874 Ryr1E9PZQ0 5035 aa2.39□□□□□ -2.03
Nck1-201ENSMUST00000112874 BsnO88737 3942 aa2.37□□□□□ -2.03
Nck1-201ENSMUST00000112874 Defb39Q70KL3 74 aa2.37□□□□□ -2.03
Nck1-201ENSMUST00000112874 Csmd3Q80T79 3707 aa2.34□□□□□ -2.03
Nck1-201ENSMUST00000112874 CubnQ9JLB4 3623 aa2.34□□□□□ -2.03
Nck1-201ENSMUST00000112874 Hspg2Q05793 3707 aaKnown RBP2.34□□□□□ -2.03
Nck1-201ENSMUST00000112874 Dnah10D3YYQ8 4591 aa2.34□□□□□ -2.04
Nck1-201ENSMUST00000112874 Hectd4E9Q2E4 4418 aa2.33□□□□□ -2.04
Nck1-201ENSMUST00000112874 Lce3dE9Q8V1 98 aa2.33□□□□□ -2.04
Nck1-201ENSMUST00000112874 Lce3aQ497I5 98 aa2.33□□□□□ -2.04
Nck1-201ENSMUST00000112874 PrkdcP97313 4128 aa2.3□□□□□ -2.04
Nck1-201ENSMUST00000112874 BC029722A0A0N4SW31 51 aa2.3□□□□□ -2.04
Nck1-201ENSMUST00000112874 Leap2Q91V13 76 aa2.3□□□□□ -2.04
Nck1-201ENSMUST00000112874 HrnrQ8VHD8 2496 aa2.29□□□□□ -2.04
Nck1-201ENSMUST00000112874 ApobE9Q414 4505 aa2.28□□□□□ -2.04
Nck1-201ENSMUST00000112874 Dync2h1Q45VK7 4306 aa2.27□□□□□ -2.05
Nck1-201ENSMUST00000112874 SacsQ9JLC8 4582 aa2.25□□□□□ -2.05
Nck1-201ENSMUST00000112874 Xirp2Q4U4S6 3784 aa2.23□□□□□ -2.05
Nck1-201ENSMUST00000112874 Dnah3Q8BW94 4083 aa2.21□□□□□ -2.06
Nck1-201ENSMUST00000112874 Dnah6E9Q0B6 4144 aa2.21□□□□□ -2.06
Nck1-201ENSMUST00000112874 Stab2Q8R4U0 2559 aa2.21□□□□□ -2.06
Nck1-201ENSMUST00000112874 PlecQ9QXS1 4691 aaKnown RBP2.2□□□□□ -2.06
Nck1-201ENSMUST00000112874 Kmt2aP55200 3966 aa2.2□□□□□ -2.06
Nck1-201ENSMUST00000112874 Sprr2gO70558 76 aa2.2□□□□□ -2.06
Nck1-201ENSMUST00000112874 Ryr3A2AGL3 4863 aa2.2□□□□□ -2.06
Nck1-201ENSMUST00000112874 Rps29P62274 56 aa2.19□□□□□ -2.06
Nck1-201ENSMUST00000112874 Fras1Q80T14 4010 aa2.19□□□□□ -2.06
Nck1-201ENSMUST00000112874 Ryr2E9Q401 4966 aaKnown RBP2.19□□□□□ -2.06
Nck1-201ENSMUST00000112874 Sprr2kO70562 68 aa2.18□□□□□ -2.06
Nck1-201ENSMUST00000112874 Dnah11E9Q7N9 4488 aa2.17□□□□□ -2.06
Nck1-201ENSMUST00000112874 Gm11938Q9D3H4 131 aa2.16□□□□□ -2.06
Nck1-201ENSMUST00000112874 Dnah2P0C6F1 4456 aa2.16□□□□□ -2.06
Nck1-201ENSMUST00000112874 Dnah1E9Q8T7 4250 aa2.15□□□□□ -2.06
Nck1-201ENSMUST00000112874 Dnah14A0A140LIJ4 4489 aa2.15□□□□□ -2.06
Nck1-201ENSMUST00000112874 Sprr2eO70556 76 aa2.13□□□□□ -2.07
Nck1-201ENSMUST00000112874 Abca13Q5SSE9 5034 aa2.13□□□□□ -2.07
Nck1-201ENSMUST00000112874 Birc6O88738 4882 aa2.12□□□□□ -2.07
Nck1-201ENSMUST00000112874 Lce3fQ6PAI4 98 aa2.12□□□□□ -2.07
Nck1-201ENSMUST00000112874 Lce3cQ91V05 98 aa2.12□□□□□ -2.07
Nck1-201ENSMUST00000112874 Huwe1Q7TMY8 4377 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 22,080 RNA–protein pairs in 208.9 ms