RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	FPR4	Q06205	392 aa	Predicted RBP	1.47	□□□□□ -2.17
snR46	snR46	THI3	Q07471	609 aa		1.47	□□□□□ -2.17
snR46	snR46	CBP1	P07252	654 aa		1.46	□□□□□ -2.18
snR46	snR46	BUD14	P27637	709 aa		1.46	□□□□□ -2.18
snR46	snR46	STB5	P38699	743 aa		1.46	□□□□□ -2.18
snR46	snR46	IDS2	P46958	469 aa		1.46	□□□□□ -2.18
snR46	snR46	ATG27	P46989	271 aa		1.46	□□□□□ -2.18
snR46	snR46	ARP9	Q05123	467 aa		1.46	□□□□□ -2.18
snR46	snR46	YPL191C	Q08930	360 aa		1.46	□□□□□ -2.18
snR46	snR46	HFI1	Q12060	488 aa		1.46	□□□□□ -2.18
snR46	snR46	YBR298C-A	Q8TGK4	73 aa		1.46	□□□□□ -2.18
snR46	snR46	RPS21A	P0C0V8	87 aa	Known RBP	1.45	□□□□□ -2.18
snR46	snR46	GUK1	P15454	187 aa	Known RBP	1.45	□□□□□ -2.18
snR46	snR46	CWH43	P25618	953 aa		1.45	□□□□□ -2.18
snR46	snR46	HXT4	P32467	576 aa		1.45	□□□□□ -2.18
snR46	snR46	RPN2	P32565	945 aa	Known RBP	1.45	□□□□□ -2.18
snR46	snR46	SIP1	P32578	815 aa		1.45	□□□□□ -2.18
snR46	snR46	SWH1	P35845	1188 aa		1.45	□□□□□ -2.18
snR46	snR46	OCT1	P35999	772 aa		1.45	□□□□□ -2.18
snR46	snR46	VPS41	P38959	992 aa		1.45	□□□□□ -2.18
snR46	snR46	YJR061W	P40355	935 aa		1.45	□□□□□ -2.18
snR46	snR46	YDR415C	Q04033	374 aa	Predicted RBP	1.45	□□□□□ -2.18
snR46	snR46	NGL1	Q08213	363 aa	Known RBP	1.45	□□□□□ -2.18
snR46	snR46	MCH4	Q08268	501 aa		1.45	□□□□□ -2.18
snR46	snR46	LEA1	Q08963	238 aa	Predicted RBP	1.45	□□□□□ -2.18
snR46	snR46	PPT2	Q12036	173 aa		1.45	□□□□□ -2.18
snR46	snR46	FAP7	Q12055	197 aa	Predicted RBP	1.45	□□□□□ -2.18
snR46	snR46	DAP1	Q12091	152 aa		1.45	□□□□□ -2.18
snR46	snR46	CSR2	Q12734	1121 aa		1.45	□□□□□ -2.18
snR46	snR46	YCR006C	P25350	157 aa		1.44	□□□□□ -2.18
snR46	snR46	MSH1	P25846	959 aa		1.44	□□□□□ -2.18
snR46	snR46	RPF2	P36160	344 aa	Known RBP	1.44	□□□□□ -2.18
snR46	snR46	RIM2	P38127	377 aa		1.44	□□□□□ -2.18
snR46	snR46	AVT5	P38176	459 aa		1.44	□□□□□ -2.18
snR46	snR46	ARO9	P38840	513 aa	Predicted RBP	1.44	□□□□□ -2.18
snR46	snR46	TPA1	P40032	644 aa	Known RBP	1.44	□□□□□ -2.18
snR46	snR46	YNL234W	P53857	426 aa		1.44	□□□□□ -2.18
snR46	snR46	TAF7	Q05021	590 aa		1.44	□□□□□ -2.18
snR46	snR46	BAR1	P12630	587 aa		1.43	□□□□□ -2.18
snR46	snR46	KGD2	P19262	463 aa	Predicted RBP	1.43	□□□□□ -2.18
snR46	snR46	SWC3	P31376	625 aa		1.43	□□□□□ -2.18
snR46	snR46	DID4	P36108	232 aa		1.43	□□□□□ -2.18
snR46	snR46	UBP7	P40453	1071 aa		1.43	□□□□□ -2.18
snR46	snR46	GZF3	P42944	551 aa	Known RBP	1.43	□□□□□ -2.18
snR46	snR46	RNR4	P49723	345 aa	Known RBP	1.43	□□□□□ -2.18
snR46	snR46	RNH70	P53331	553 aa		1.43	□□□□□ -2.18
snR46	snR46	YPR003C	P53394	754 aa		1.43	□□□□□ -2.18
snR46	snR46	SMA1	Q02651	245 aa		1.43	□□□□□ -2.18
snR46	snR46	CAC2	Q04199	468 aa		1.43	□□□□□ -2.18
snR46	snR46	SWF1	Q04629	336 aa		1.43	□□□□□ -2.18
snR46	snR46	PIG1	Q06216	648 aa		1.43	□□□□□ -2.18
snR46	snR46	TLG2	Q08144	397 aa		1.43	□□□□□ -2.18
snR46	snR46	FRE3	Q08905	711 aa		1.43	□□□□□ -2.18
snR46	snR46	HOS1	Q12214	470 aa		1.43	□□□□□ -2.18
snR46	snR46	MGR1	P25573	417 aa		1.42	□□□□□ -2.18
snR46	snR46	TYS1	P36421	394 aa	Known RBP	1.42	□□□□□ -2.18
snR46	snR46	EFM2	P38347	419 aa		1.42	□□□□□ -2.18
snR46	snR46	IML2	P47031	731 aa		1.42	□□□□□ -2.18
snR46	snR46	YNL181W	P53878	407 aa		1.42	□□□□□ -2.18
snR46	snR46	YTM1	Q12024	460 aa	Predicted RBP	1.42	□□□□□ -2.18
snR46	snR46	VPS5	Q92331	675 aa		1.42	□□□□□ -2.18
snR46	snR46	APM4	Q99186	491 aa		1.42	□□□□□ -2.18
snR46	snR46	ARG1	P22768	420 aa		1.41	□□□□□ -2.18
snR46	snR46	SRP68	P38687	599 aa	Known RBP	1.41	□□□□□ -2.18
snR46	snR46	MNN11	P46985	422 aa	Known RBP	1.41	□□□□□ -2.18
snR46	snR46	PSR2	Q07949	397 aa		1.41	□□□□□ -2.18
snR46	snR46	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	1.41	□□□□□ -2.18	not detected
snR46	snR46	RPS2	P25443	254 aa	Known RBP	1.4	□□□□□ -2.19
snR46	snR46	SPG5	P42933	373 aa		1.4	□□□□□ -2.19
snR46	snR46	OSW7	P43611	510 aa		1.4	□□□□□ -2.19
snR46	snR46	HLJ1	P48353	224 aa		1.4	□□□□□ -2.19
snR46	snR46	CRF1	Q04930	467 aa		1.4	□□□□□ -2.19
snR46	snR46	DIN7	Q12086	430 aa		1.4	□□□□□ -2.19
snR46	snR46	CTT1	P06115	562 aa		1.39	□□□□□ -2.19
snR46	snR46	ATP12	P22135	325 aa		1.39	□□□□□ -2.19
snR46	snR46	PDR3	P33200	976 aa		1.39	□□□□□ -2.19
snR46	snR46	HES1	P35843	434 aa		1.39	□□□□□ -2.19
snR46	snR46	CDC1	P40986	491 aa		1.39	□□□□□ -2.19
snR46	snR46	MTQ2	Q03920	221 aa	Predicted RBP	1.39	□□□□□ -2.19
snR46	snR46	UTP21	Q06078	939 aa	Predicted RBP	1.39	□□□□□ -2.19
snR46	snR46	YOR378W	Q08902	515 aa		1.39	□□□□□ -2.19
snR46	snR46	URA3	P03962	267 aa		1.38	□□□□□ -2.19
snR46	snR46	RPL8A	P17076	256 aa	Known RBP	1.38	□□□□□ -2.19
snR46	snR46	YCR061W	P25639	631 aa		1.38	□□□□□ -2.19
snR46	snR46	PRE2	P30656	287 aa	Known RBP	1.38	□□□□□ -2.19
snR46	snR46	YPI1	P43587	155 aa		1.38	□□□□□ -2.19
snR46	snR46	BOR1	P53838	576 aa		1.38	□□□□□ -2.19
snR46	snR46	EAF7	P53911	425 aa	Known RBP	1.38	□□□□□ -2.19
snR46	snR46	BSC1	Q12140	328 aa		1.38	□□□□□ -2.19
snR46	snR46	SUI3	P09064	285 aa	Known RBP	1.37	□□□□□ -2.19
snR46	snR46	PGI1	P12709	554 aa	Known RBP	1.37	□□□□□ -2.19
snR46	snR46	LAC1	P28496	418 aa		1.37	□□□□□ -2.19
snR46	snR46	YPK3	P38070	525 aa		1.37	□□□□□ -2.19
snR46	snR46	ERC1	P38767	581 aa		1.37	□□□□□ -2.19
snR46	snR46	MTC6	P38849	526 aa		1.37	□□□□□ -2.19
snR46	snR46	MDM31	P38880	579 aa		1.37	□□□□□ -2.19
snR46	snR46	FUN12	P39730	1002 aa	Known RBP	1.37	□□□□□ -2.19
snR46	snR46	VFA1	P40080	203 aa		1.37	□□□□□ -2.19
snR46	snR46	YIR014W	P40570	242 aa		1.37	□□□□□ -2.19
snR46	snR46	GSM1	P42950	618 aa		1.37	□□□□□ -2.19

Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms