RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	GPP1	P41277	250 aa	Known RBP	3	□□□□□ -1.93
RUD3	YOR216C	AZF1	P41696	914 aa		3	□□□□□ -1.93
RUD3	YOR216C	IDS2	P46958	469 aa		3	□□□□□ -1.93
RUD3	YOR216C	VPS25	P47142	202 aa		3	□□□□□ -1.93
RUD3	YOR216C	GPG1	P53130	126 aa		3	□□□□□ -1.93
RUD3	YOR216C	EAF7	P53911	425 aa	Known RBP	3	□□□□□ -1.93
RUD3	YOR216C	UME1	Q03010	460 aa		3	□□□□□ -1.93
RUD3	YOR216C	PDR8	Q06149	701 aa		3	□□□□□ -1.93
RUD3	YOR216C	YPL191C	Q08930	360 aa		3	□□□□□ -1.93
RUD3	YOR216C	APL5	Q08951	932 aa	Known RBP	3	□□□□□ -1.93
RUD3	YOR216C	RRP14	P36080	434 aa	Known RBP	2.99	□□□□□ -1.93
RUD3	YOR216C	CDC1	P40986	491 aa		2.99	□□□□□ -1.93
RUD3	YOR216C	YGL036W	P53185	909 aa	Predicted RBP	2.99	□□□□□ -1.93
RUD3	YOR216C	YPR003C	P53394	754 aa		2.99	□□□□□ -1.93
RUD3	YOR216C	ARP9	Q05123	467 aa		2.99	□□□□□ -1.93
RUD3	YOR216C	ALG12	P53730	551 aa		2.98	□□□□□ -1.93
RUD3	YOR216C	ESBP6	P53918	673 aa		2.98	□□□□□ -1.93
RUD3	YOR216C	CRZ1	P53968	678 aa		2.98	□□□□□ -1.93
RUD3	YOR216C	IOC4	Q04213	475 aa		2.98	□□□□□ -1.93
RUD3	YOR216C	THI3	Q07471	609 aa		2.98	□□□□□ -1.93
RUD3	YOR216C	YPR027C	Q12079	277 aa		2.98	□□□□□ -1.93
RUD3	YOR216C	PRP45	P28004	379 aa	Predicted RBP	2.97	□□□□□ -1.93
RUD3	YOR216C	OCT1	P35999	772 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	EFM2	P38347	419 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	ERC1	P38767	581 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	EAF5	P39995	279 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	GSM1	P42950	618 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	CUL3	P53202	744 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	CAC2	Q04199	468 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	LEA1	Q08963	238 aa	Predicted RBP	2.97	□□□□□ -1.93
RUD3	YOR216C	DIN7	Q12086	430 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	RTK1	Q12100	620 aa	Predicted RBP	2.97	□□□□□ -1.93
RUD3	YOR216C	TAH18	Q12181	623 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	HOS1	Q12214	470 aa		2.97	□□□□□ -1.93
RUD3	YOR216C	PRE2	P30656	287 aa	Known RBP	2.96	□□□□□ -1.93
RUD3	YOR216C	TIF3	P34167	436 aa	Known RBP	2.96	□□□□□ -1.93
RUD3	YOR216C	MAD2	P40958	196 aa		2.96	□□□□□ -1.93
RUD3	YOR216C	YNR071C	P53757	342 aa		2.96	□□□□□ -1.93
RUD3	YOR216C	YMR254C	Q04838	102 aa		2.96	□□□□□ -1.93
RUD3	YOR216C	TLG2	Q08144	397 aa		2.96	□□□□□ -1.93
RUD3	YOR216C	SAN1	P22470	610 aa		2.96	□□□□□ -1.94
RUD3	YOR216C	PET309	P32522	965 aa	Predicted RBP	2.96	□□□□□ -1.94
RUD3	YOR216C	YJL070C	P40361	888 aa		2.96	□□□□□ -1.94
RUD3	YOR216C	ZAP1	P47043	880 aa		2.96	□□□□□ -1.94
RUD3	YOR216C	PSP1	P50896	841 aa	Known RBP	2.96	□□□□□ -1.94
RUD3	YOR216C	SKY1	Q03656	742 aa		2.96	□□□□□ -1.94
RUD3	YOR216C	PIG1	Q06216	648 aa		2.96	□□□□□ -1.94
RUD3	YOR216C	POS5	Q06892	414 aa		2.96	□□□□□ -1.94
RUD3	YOR216C	CWC2	Q12046	339 aa	Predicted RBP	2.96	□□□□□ -1.94
RUD3	YOR216C	REV1	P12689	985 aa		2.95	□□□□□ -1.94
RUD3	YOR216C	HNM1	P19807	563 aa		2.95	□□□□□ -1.94
RUD3	YOR216C	PMT3	P47190	753 aa		2.95	□□□□□ -1.94
RUD3	YOR216C	ECI1	Q05871	280 aa		2.95	□□□□□ -1.94
RUD3	YOR216C	BSC6	Q08280	497 aa		2.95	□□□□□ -1.94
RUD3	YOR216C	YML002W	P0CF17	737 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	RPF2	P36160	344 aa	Known RBP	2.94	□□□□□ -1.94
RUD3	YOR216C	KRE9	P39005	276 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	SHE10	P53075	577 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	CRF1	Q04930	467 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	MCH4	Q08268	501 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	FRE3	Q08905	711 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	YBR298C-A	Q8TGK4	73 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	NUP145	P49687	1317 aa		2.94	□□□□□ -1.94
RUD3	YOR216C	CPR3	P25719	182 aa		2.93	□□□□□ -1.94
RUD3	YOR216C	FAP7	Q12055	197 aa	Predicted RBP	2.93	□□□□□ -1.94
RUD3	YOR216C	GPP2	P40106	250 aa	Known RBP	2.92	□□□□□ -1.94
RUD3	YOR216C	UBP8	P50102	471 aa		2.92	□□□□□ -1.94
RUD3	YOR216C	PMS1	P14242	873 aa		2.91	□□□□□ -1.94
RUD3	YOR216C	SIP1	P32578	815 aa		2.91	□□□□□ -1.94
RUD3	YOR216C	ARB1	P40024	610 aa	Known RBP	2.91	□□□□□ -1.94
RUD3	YOR216C	NPA3	P47122	385 aa		2.91	□□□□□ -1.94
RUD3	YOR216C	PPG1	P32838	368 aa		2.9	□□□□□ -1.94
RUD3	YOR216C	TRS31	Q03337	283 aa		2.9	□□□□□ -1.94
RUD3	YOR216C	SWF1	Q04629	336 aa		2.9	□□□□□ -1.94
RUD3	YOR216C	VFA1	P40080	203 aa		2.9	□□□□□ -1.95
RUD3	YOR216C	IML2	P47031	731 aa		2.9	□□□□□ -1.95
RUD3	YOR216C	YNR029C	P53729	429 aa	Known RBP	2.9	□□□□□ -1.95
RUD3	YOR216C	RMP1	Q12530	201 aa		2.9	□□□□□ -1.95
RUD3	YOR216C	CBP1	P07252	654 aa		2.89	□□□□□ -1.95
RUD3	YOR216C	RAD24	P32641	659 aa		2.89	□□□□□ -1.95
RUD3	YOR216C	PCA1	P38360	1216 aa		2.89	□□□□□ -1.95
RUD3	YOR216C	STL1	P39932	569 aa		2.89	□□□□□ -1.95
RUD3	YOR216C	MKT1	P40850	830 aa	Known RBP	2.89	□□□□□ -1.95
RUD3	YOR216C	ATG27	P46989	271 aa		2.89	□□□□□ -1.95
RUD3	YOR216C	ADD37	Q03233	198 aa		2.89	□□□□□ -1.95
RUD3	YOR216C	BAR1	P12630	587 aa		2.88	□□□□□ -1.95
RUD3	YOR216C	YCR006C	P25350	157 aa		2.88	□□□□□ -1.95
RUD3	YOR216C	LAC1	P28496	418 aa		2.88	□□□□□ -1.95
RUD3	YOR216C	LEU5	P38702	357 aa		2.88	□□□□□ -1.95
RUD3	YOR216C	SSP120	P39931	234 aa	Known RBP	2.88	□□□□□ -1.95
RUD3	YOR216C	DUG1	P43616	481 aa	Known RBP	2.88	□□□□□ -1.95
RUD3	YOR216C	YRB30	P53107	440 aa	Predicted RBP	2.88	□□□□□ -1.95
RUD3	YOR216C	UTP14	Q04500	899 aa	Known RBP	2.88	□□□□□ -1.95
RUD3	YOR216C	DBP10	Q12389	995 aa	Known RBP	2.88	□□□□□ -1.95
RUD3	YOR216C	YTA7	P40340	1379 aa		2.88	□□□□□ -1.95
RUD3	YOR216C	GPA1	P08539	472 aa		2.87	□□□□□ -1.95
RUD3	YOR216C	MGR1	P25573	417 aa		2.87	□□□□□ -1.95
RUD3	YOR216C	MRPL4	P36517	319 aa		2.87	□□□□□ -1.95
RUD3	YOR216C	AVT5	P38176	459 aa		2.87	□□□□□ -1.95
RUD3	YOR216C	YHR218W	P38899	603 aa		2.87	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms