RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W CDC26P14724 124 aa1.45□□□□□ -2.18
PRP39YML046W TRS65P32893 560 aa1.45□□□□□ -2.18
PRP39YML046W EAF7P53911 425 aaKnown RBP1.45□□□□□ -2.18
PRP39YML046W YLR125WQ12138 136 aa1.45□□□□□ -2.18
PRP39YML046W GCN1P33892 2672 aaKnown RBP1.44□□□□□ -2.18
PRP39YML046W MGR1P25573 417 aa1.44□□□□□ -2.18
PRP39YML046W SIM1P40472 476 aa1.44□□□□□ -2.18
PRP39YML046W FPR4Q06205 392 aaPredicted RBP1.44□□□□□ -2.18
PRP39YML046W YPL191CQ08930 360 aa1.44□□□□□ -2.18
PRP39YML046W PTC6P25646 442 aa1.43□□□□□ -2.18
PRP39YML046W VBA2P38358 474 aaKnown RBP1.43□□□□□ -2.18
PRP39YML046W PEF1P53238 335 aa1.43□□□□□ -2.18
PRP39YML046W YNL181WP53878 407 aa1.43□□□□□ -2.18
PRP39YML046W YLR001CQ07895 862 aa1.43□□□□□ -2.18
PRP39YML046W MCH4Q08268 501 aa1.43□□□□□ -2.18
PRP39YML046W DIN7Q12086 430 aa1.43□□□□□ -2.18
PRP39YML046W CBP1P07252 654 aa1.43□□□□□ -2.18
PRP39YML046W KGD2P19262 463 aaPredicted RBP1.43□□□□□ -2.18
PRP39YML046W DGR2P32330 852 aa1.43□□□□□ -2.18
PRP39YML046W OAF3P36023 863 aa1.43□□□□□ -2.18
PRP39YML046W YGR153WP48238 217 aa1.43□□□□□ -2.18
PRP39YML046W YGL242CP53066 181 aa1.43□□□□□ -2.18
PRP39YML046W RBG2P53295 368 aaKnown RBP1.43□□□□□ -2.18
PRP39YML046W ORC1P54784 914 aaPredicted RBP1.43□□□□□ -2.18
PRP39YML046W SWF1Q04629 336 aa1.43□□□□□ -2.18
PRP39YML046W PIG1Q06216 648 aa1.43□□□□□ -2.18
PRP39YML046W FMP27Q06179 2628 aa1.43□□□□□ -2.18
PRP39YML046W AEP2P22136 580 aa1.42□□□□□ -2.18
PRP39YML046W RPS2P25443 254 aaKnown RBP1.42□□□□□ -2.18
PRP39YML046W CDC1P40986 491 aa1.42□□□□□ -2.18
PRP39YML046W RNH70P53331 553 aa1.42□□□□□ -2.18
PRP39YML046W LEA1Q08963 238 aaPredicted RBP1.42□□□□□ -2.18
PRP39YML046W PRP8P33334 2413 aaKnown RBP1.42□□□□□ -2.18
PRP39YML046W PHO8P11491 566 aa1.41□□□□□ -2.18
PRP39YML046W HXT1P32465 570 aa1.41□□□□□ -2.18
PRP39YML046W PTH1P38876 190 aaKnown RBP1.41□□□□□ -2.18
PRP39YML046W PRE5P40302 234 aaKnown RBP1.41□□□□□ -2.18
PRP39YML046W COS12P53053 380 aa1.41□□□□□ -2.18
PRP39YML046W MDR1P53258 950 aa1.41□□□□□ -2.18
PRP39YML046W SMA1Q02651 245 aa1.41□□□□□ -2.18
PRP39YML046W YHM2Q04013 314 aa1.41□□□□□ -2.18
PRP39YML046W THI4P32318 326 aa1.41□□□□□ -2.18
PRP39YML046W FAT1P38225 669 aa1.41□□□□□ -2.18
PRP39YML046W ARO9P38840 513 aaPredicted RBP1.41□□□□□ -2.18
PRP39YML046W HXT6P39003 570 aaKnown RBP1.41□□□□□ -2.18
PRP39YML046W HXT7P39004 570 aa1.41□□□□□ -2.18
PRP39YML046W NUP82P40368 713 aa1.41□□□□□ -2.18
PRP39YML046W YDR415CQ04033 374 aaPredicted RBP1.41□□□□□ -2.18
PRP39YML046W BSC1Q12140 328 aa1.41□□□□□ -2.18
PRP39YML046W CKB2P38930 258 aa1.4□□□□□ -2.19
PRP39YML046W FAP7Q12055 197 aaPredicted RBP1.4□□□□□ -2.19
PRP39YML046W SRO77P38163 1010 aa1.39□□□□□ -2.19
PRP39YML046W RTS1P38903 757 aa1.39□□□□□ -2.19
PRP39YML046W YPR003CP53394 754 aa1.39□□□□□ -2.19
PRP39YML046W PSR2Q07949 397 aa1.39□□□□□ -2.19
PRP39YML046W NTG2Q08214 380 aa1.39□□□□□ -2.19
PRP39YML046W FRE3Q08905 711 aa1.39□□□□□ -2.19
PRP39YML046W HFI1Q12060 488 aa1.39□□□□□ -2.19
PRP39YML046W GUK1P15454 187 aaKnown RBP1.39□□□□□ -2.19
PRP39YML046W MDM31P38880 579 aa1.39□□□□□ -2.19
PRP39YML046W MGS1P40151 587 aa1.39□□□□□ -2.19
PRP39YML046W APM4Q99186 491 aa1.39□□□□□ -2.19
PRP39YML046W RPF2P36160 344 aaKnown RBP1.38□□□□□ -2.19
PRP39YML046W YIR014WP40570 242 aa1.38□□□□□ -2.19
PRP39YML046W YNL234WP53857 426 aa1.38□□□□□ -2.19
PRP39YML046W PTA1Q01329 785 aaPredicted RBP1.38□□□□□ -2.19
PRP39YML046W ECM9Q02202 377 aa1.38□□□□□ -2.19
PRP39YML046W CWH43P25618 953 aa1.37□□□□□ -2.19
PRP39YML046W HXT4P32467 576 aa1.37□□□□□ -2.19
PRP39YML046W IDS2P46958 469 aa1.37□□□□□ -2.19
PRP39YML046W YJR096WP47137 282 aa1.37□□□□□ -2.19
PRP39YML046W YNL193WP53870 558 aa1.37□□□□□ -2.19
PRP39YML046W TAF7Q05021 590 aa1.37□□□□□ -2.19
PRP39YML046W RSF1Q05043 376 aa1.37□□□□□ -2.19
PRP39YML046W PGI1P12709 554 aaKnown RBP1.37□□□□□ -2.19
PRP39YML046W YCR006CP25350 157 aa1.37□□□□□ -2.19
PRP39YML046W STB5P38699 743 aa1.37□□□□□ -2.19
PRP39YML046W RPN4Q03465 531 aa1.37□□□□□ -2.19
PRP39YML046W UTP21Q06078 939 aaPredicted RBP1.37□□□□□ -2.19
PRP39YML046W UTP20P35194 2493 aaKnown RBP1.37□□□□□ -2.19
PRP39YML046W SOD1P00445 154 aaKnown RBP1.36□□□□□ -2.19
PRP39YML046W NAT1P12945 854 aaKnown RBP1.36□□□□□ -2.19
PRP39YML046W SIP1P32578 815 aa1.36□□□□□ -2.19
PRP39YML046W YPK3P38070 525 aa1.36□□□□□ -2.19
PRP39YML046W ERC1P38767 581 aa1.36□□□□□ -2.19
PRP39YML046W SMK1P41808 388 aa1.36□□□□□ -2.19
PRP39YML046W VPS5Q92331 675 aa1.36□□□□□ -2.19
PRP39YML046W KOG1P38873 1557 aa1.36□□□□□ -2.19
PRP39YML046W YCR061WP25639 631 aa1.35□□□□□ -2.19
PRP39YML046W PRP19P32523 503 aaKnown RBP1.35□□□□□ -2.19
PRP39YML046W PDR3P33200 976 aa1.35□□□□□ -2.19
PRP39YML046W LEU5P38702 357 aa1.35□□□□□ -2.19
PRP39YML046W YJL132WP47014 750 aa1.35□□□□□ -2.19
PRP39YML046W RPS21AP0C0V8 87 aaKnown RBP1.35□□□□□ -2.19
PRP39YML046W GLN3P18494 730 aa1.35□□□□□ -2.19
PRP39YML046W ARG1P22768 420 aa1.35□□□□□ -2.19
PRP39YML046W YEL045CP32616 141 aa1.35□□□□□ -2.19
PRP39YML046W NOP7P53261 605 aaKnown RBP1.35□□□□□ -2.19
PRP39YML046W SDA1P53313 767 aaKnown RBP1.35□□□□□ -2.19
PRP39YML046W TFB2Q02939 513 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 89.3 ms