RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeast

Gene SMD2, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMD2	YLR275W	TAN1	P53072	289 aa	Predicted RBP	4.26	□□□□□ -1.73
SMD2	YLR275W	MET14	Q02196	202 aa		4.26	□□□□□ -1.73
SMD2	YLR275W	ARA2	Q04212	335 aa		4.26	□□□□□ -1.73
SMD2	YLR275W	MRPL1	Q04599	285 aa		4.26	□□□□□ -1.73
SMD2	YLR275W	HER1	Q12276	1246 aa		4.26	□□□□□ -1.73
SMD2	YLR275W	PTC6	P25646	442 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	APM3	P38153	483 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	FLO5	P38894	1075 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	UBP7	P40453	1071 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	QRI7	P43122	407 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	IRC8	P47046	822 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	EIS1	Q05050	843 aa	Known RBP	4.25	□□□□□ -1.73
SMD2	YLR275W	MLC2	Q06580	163 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	PFA4	Q12006	378 aa		4.25	□□□□□ -1.73
SMD2	YLR275W	GAL1	P04385	528 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	POL3	P15436	1097 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	RIT1	P23796	513 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	LAC1	P28496	418 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	MGM1	P32266	881 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	FUN12	P39730	1002 aa	Known RBP	4.24	□□□□□ -1.73
SMD2	YLR275W	ORC5	P50874	479 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	YGR079W	P53249	370 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	MOT3	P54785	490 aa	Known RBP	4.24	□□□□□ -1.73
SMD2	YLR275W	ATG21	Q02887	496 aa		4.24	□□□□□ -1.73
SMD2	YLR275W	BRE1	Q07457	700 aa	Known RBP	4.24	□□□□□ -1.73
SMD2	YLR275W	IWR1	Q07532	353 aa	Predicted RBP	4.24	□□□□□ -1.73
SMD2	YLR275W	LEA1	Q08963	238 aa	Predicted RBP	4.24	□□□□□ -1.73
SMD2	YLR275W	COX1	P00401	534 aa		4.23	□□□□□ -1.73
SMD2	YLR275W	GAL4	P04386	881 aa		4.23	□□□□□ -1.73
SMD2	YLR275W	ADE3	P07245	946 aa	Known RBP	4.23	□□□□□ -1.73
SMD2	YLR275W	PIF1	P07271	859 aa		4.23	□□□□□ -1.73
SMD2	YLR275W	RPT3	P33298	428 aa	Known RBP	4.23	□□□□□ -1.73
SMD2	YLR275W	HIS6	P40545	261 aa		4.23	□□□□□ -1.73
SMD2	YLR275W	RPL15B	P54780	204 aa	Predicted RBP	4.23	□□□□□ -1.73
SMD2	YLR275W	VTC3	Q02725	835 aa		4.23	□□□□□ -1.73
SMD2	YLR275W	THI3	Q07471	609 aa		4.23	□□□□□ -1.73
SMD2	YLR275W	MCM3	P24279	971 aa	Known RBP	4.22	□□□□□ -1.73
SMD2	YLR275W	MSS51	P32335	436 aa		4.22	□□□□□ -1.73
SMD2	YLR275W	HES1	P35843	434 aa		4.22	□□□□□ -1.73
SMD2	YLR275W	YJL107C	P42947	387 aa		4.22	□□□□□ -1.73
SMD2	YLR275W	UBX6	P47049	396 aa		4.22	□□□□□ -1.73
SMD2	YLR275W	YRB30	P53107	440 aa	Predicted RBP	4.22	□□□□□ -1.73
SMD2	YLR275W	GTB1	Q04924	702 aa		4.22	□□□□□ -1.73
SMD2	YLR275W	HIM1	Q06674	414 aa		4.22	□□□□□ -1.73
SMD2	YLR275W	RVB2	Q12464	471 aa	Known RBP	4.22	□□□□□ -1.73
SMD2	YLR275W	MSS18	P08593	268 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	MIS1	P09440	975 aa	Known RBP	4.21	□□□□□ -1.74
SMD2	YLR275W	PET122	P10355	254 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	SEC18	P18759	758 aa	Known RBP	4.21	□□□□□ -1.74
SMD2	YLR275W	AIM17	P23180	465 aa	Known RBP	4.21	□□□□□ -1.74
SMD2	YLR275W	SWI4	P25302	1093 aa	Known RBP	4.21	□□□□□ -1.74
SMD2	YLR275W	YCP4	P25349	247 aa	Known RBP	4.21	□□□□□ -1.74
SMD2	YLR275W	URK1	P27515	501 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	PTP2	P29461	750 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	ARN1	P38731	627 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	TOM71	P38825	639 aa	Known RBP	4.21	□□□□□ -1.74
SMD2	YLR275W	SCS3	P53012	380 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	TAM41	P53230	385 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	CPR6	P53691	371 aa	Known RBP	4.21	□□□□□ -1.74
SMD2	YLR275W	SUL2	Q12325	893 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	RRI1	Q12468	440 aa		4.21	□□□□□ -1.74
SMD2	YLR275W	ATP4	P05626	244 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	BIK1	P11709	440 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	CNA1	P23287	553 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	MSH1	P25846	959 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	ARP2	P32381	391 aa	Known RBP	4.2	□□□□□ -1.74
SMD2	YLR275W	SCO2	P38072	301 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	SPC72	P39723	622 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	SKP2	P42843	763 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	IMA1	P53051	589 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	YPR003C	P53394	754 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	YDR109C	Q04585	715 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	ATX2	Q12067	313 aa		4.2	□□□□□ -1.74
SMD2	YLR275W	YPT1	P01123	206 aa	Known RBP	4.19	□□□□□ -1.74
SMD2	YLR275W	GCD7	P32502	381 aa	Predicted RBP	4.19	□□□□□ -1.74
SMD2	YLR275W	PXL1	P36166	706 aa		4.19	□□□□□ -1.74
SMD2	YLR275W	VPS27	P40343	622 aa	Known RBP	4.19	□□□□□ -1.74
SMD2	YLR275W	YIR016W	P40572	265 aa		4.19	□□□□□ -1.74
SMD2	YLR275W	MDV1	P47025	714 aa		4.19	□□□□□ -1.74
SMD2	YLR275W	MTG1	Q03151	367 aa	Predicted RBP	4.19	□□□□□ -1.74
SMD2	YLR275W	BUD16	P39988	312 aa		4.18	□□□□□ -1.74
SMD2	YLR275W	CDC1	P40986	491 aa		4.18	□□□□□ -1.74
SMD2	YLR275W	LYS20	P48570	428 aa	Known RBP	4.18	□□□□□ -1.74
SMD2	YLR275W	YNL144C	P53907	740 aa		4.18	□□□□□ -1.74
SMD2	YLR275W	TDA9	Q04545	1251 aa		4.18	□□□□□ -1.74
SMD2	YLR275W	ECM22	Q05958	814 aa	Predicted RBP	4.18	□□□□□ -1.74
SMD2	YLR275W	PDR8	Q06149	701 aa		4.18	□□□□□ -1.74
SMD2	YLR275W	NYV1	Q12255	253 aa		4.18	□□□□□ -1.74
SMD2	YLR275W	YUR1	P26725	428 aa		4.17	□□□□□ -1.74
SMD2	YLR275W	OCT1	P35999	772 aa		4.17	□□□□□ -1.74
SMD2	YLR275W	GND1	P38720	489 aa	Known RBP	4.17	□□□□□ -1.74
SMD2	YLR275W	FSH1	P38777	243 aa	Known RBP	4.17	□□□□□ -1.74
SMD2	YLR275W	TPA1	P40032	644 aa	Known RBP	4.17	□□□□□ -1.74
SMD2	YLR275W	MSY1	P48527	492 aa		4.17	□□□□□ -1.74
SMD2	YLR275W	YPT11	P48559	417 aa		4.17	□□□□□ -1.74
SMD2	YLR275W	BAG7	Q12128	409 aa		4.17	□□□□□ -1.74
SMD2	YLR275W	RRP6	Q12149	733 aa	Known RBP	4.17	□□□□□ -1.74
SMD2	YLR275W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
SMD2	YLR275W	YEF3	P16521	1044 aa	Known RBP	4.16	□□□□□ -1.74
SMD2	YLR275W	ATO2	P32907	282 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms