RNA–Protein interactions for RNA: YIL011W

TIR3, Transcript of Cell wall mannoprotein, yeast

Gene TIR3, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR3	YIL011W	EFM6	P53970	246 aa		10.14	□□□□□ -0.79
TIR3	YIL011W	SLT2	Q00772	484 aa		10.14	□□□□□ -0.79
TIR3	YIL011W	SGO1	Q08490	590 aa		10.14	□□□□□ -0.79
TIR3	YIL011W	NDD1	Q08887	554 aa		10.14	□□□□□ -0.79
TIR3	YIL011W	ENO1	P00924	437 aa	Known RBP	10.13	□□□□□ -0.79
TIR3	YIL011W	ERG20	P08524	352 aa	Known RBP	10.13	□□□□□ -0.79
TIR3	YIL011W	DAL81	P21657	970 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	MRPL8	P22353	238 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	GGA2	P38817	585 aa	Known RBP	10.13	□□□□□ -0.79
TIR3	YIL011W	SSP120	P39931	234 aa	Known RBP	10.13	□□□□□ -0.79
TIR3	YIL011W	STR3	P53101	465 aa	Known RBP	10.13	□□□□□ -0.79
TIR3	YIL011W	BIO4	P53630	237 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	TRS31	Q03337	283 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	PML39	Q03760	334 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	NHX1	Q04121	633 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	BUD22	Q04347	519 aa	Known RBP	10.13	□□□□□ -0.79
TIR3	YIL011W	TMN2	Q04562	672 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	CMS1	Q07897	291 aa	Known RBP	10.13	□□□□□ -0.79
TIR3	YIL011W	YLR053C	Q12026	108 aa		10.13	□□□□□ -0.79
TIR3	YIL011W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	10.12	□□□□□ -0.79	not detected
TIR3	YIL011W	DCC1	P25559	380 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	SRP101	P32916	621 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	SET3	P36124	751 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	POL12	P38121	705 aa	Predicted RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	LIN1	P38852	340 aa	Predicted RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	YJL206C	P39529	758 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	EXO1	P39875	702 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	HEM14	P40012	539 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	SLX8	P40072	274 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	YTP1	P53584	459 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	LSC1	P53598	329 aa	Known RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	NOP15	P53927	220 aa	Predicted RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	RPN9	Q04062	393 aa	Known RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	YDR344C	Q05510	147 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	CDC123	Q05791	360 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	YSH1	Q06224	779 aa	Predicted RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	BUD20	Q08004	166 aa	Predicted RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	PDH1	Q12428	516 aa	Known RBP	10.12	□□□□□ -0.79
TIR3	YIL011W	PEX11	Q12462	236 aa		10.12	□□□□□ -0.79
TIR3	YIL011W	SCH9	P11792	824 aa	Known RBP	10.11	□□□□□ -0.79
TIR3	YIL011W	CLN1	P20437	546 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	ATP12	P22135	325 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	AAT2	P23542	418 aa	Known RBP	10.11	□□□□□ -0.79
TIR3	YIL011W	RBK1	P25332	333 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	RIM1	P32445	135 aa	Known RBP	10.11	□□□□□ -0.79
TIR3	YIL011W	MAK5	P38112	773 aa	Predicted RBP	10.11	□□□□□ -0.79
TIR3	YIL011W	MRP21	P38175	177 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	MED6	P38782	295 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	RGI2	P40188	164 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	CHS6	P40955	746 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	TFG1	P41895	735 aa	Predicted RBP	10.11	□□□□□ -0.79
TIR3	YIL011W	LIA1	P47120	325 aa	Known RBP	10.11	□□□□□ -0.79
TIR3	YIL011W	NUP100	Q02629	959 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	SLD7	Q08457	257 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	YLR046C	Q12253	270 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	YDR034W-B	Q6Q5X2	51 aa		10.11	□□□□□ -0.79
TIR3	YIL011W	INO1	P11986	533 aa		10.1	□□□□□ -0.79
TIR3	YIL011W	YSP3	P25036	478 aa		10.1	□□□□□ -0.79
TIR3	YIL011W	HRR25	P29295	494 aa	Known RBP	10.1	□□□□□ -0.79
TIR3	YIL011W	GDA1	P32621	518 aa		10.1	□□□□□ -0.79
TIR3	YIL011W	LOS1	P33418	1100 aa	Predicted RBP	10.1	□□□□□ -0.79
TIR3	YIL011W	GDT1	P38301	280 aa	Predicted RBP	10.1	□□□□□ -0.79
TIR3	YIL011W	BUD13	P46947	266 aa	Predicted RBP	10.1	□□□□□ -0.79
TIR3	YIL011W	MRS2	Q01926	470 aa		10.1	□□□□□ -0.79
TIR3	YIL011W	GSF2	Q04697	403 aa	Known RBP	10.1	□□□□□ -0.79
TIR3	YIL011W	TDA5	Q06417	326 aa	Known RBP	10.1	□□□□□ -0.79
TIR3	YIL011W	RSC2	Q06488	889 aa		10.1	□□□□□ -0.79
TIR3	YIL011W	REV1	P12689	985 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	BET2	P20133	325 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	KIN3	P22209	435 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	SGF29	P25554	259 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	AAD3	P25612	363 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	CYM1	P32898	989 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	TYE7	P33122	291 aa	Predicted RBP	10.09	□□□□□ -0.79
TIR3	YIL011W	RRP14	P36080	434 aa	Known RBP	10.09	□□□□□ -0.79
TIR3	YIL011W	RDH54	P38086	958 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	YHI9	P38765	294 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	MEF2	P39677	819 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	DOT6	P40059	670 aa	Known RBP	10.09	□□□□□ -0.79
TIR3	YIL011W	SAP4	P53036	818 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	AIM14	P53109	570 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	YGL140C	P53120	1219 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	IMP4	P53941	290 aa	Known RBP	10.09	□□□□□ -0.79
TIR3	YIL011W	UBX4	P54730	416 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	PET117	Q02771	107 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	YHM2	Q04013	314 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	ADY3	Q07732	790 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	TRE2	Q08693	809 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	KCS1	Q12494	1050 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	YEL077C	Q3E7X8	1277 aa		10.09	□□□□□ -0.79
TIR3	YIL011W	SEC14	P24280	304 aa	Known RBP	10.08	□□□□□ -0.8
TIR3	YIL011W	GEX1	P25596	615 aa		10.08	□□□□□ -0.8
TIR3	YIL011W	BEM1	P29366	551 aa		10.08	□□□□□ -0.8
TIR3	YIL011W	LIP5	P32875	414 aa		10.08	□□□□□ -0.8
TIR3	YIL011W	IMP3	P32899	183 aa	Predicted RBP	10.08	□□□□□ -0.8
TIR3	YIL011W	CTF13	P35203	478 aa		10.08	□□□□□ -0.8
TIR3	YIL011W	GEX2	P36173	615 aa		10.08	□□□□□ -0.8
TIR3	YIL011W	PEP8	P40335	379 aa		10.08	□□□□□ -0.8
TIR3	YIL011W	PAN6	P40459	309 aa		10.08	□□□□□ -0.8
TIR3	YIL011W	ERG10	P41338	398 aa	Known RBP	10.08	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms