RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W YMR134WP40207 237 aa5.15□□□□□ -1.58
MSH1YHR120W OSW5P40219 148 aa5.15□□□□□ -1.58
MSH1YHR120W FLC3P53121 802 aa5.15□□□□□ -1.58
MSH1YHR120W YNL247WP53852 767 aaKnown RBP5.15□□□□□ -1.58
MSH1YHR120W KAP95Q06142 861 aaKnown RBP5.15□□□□□ -1.58
MSH1YHR120W IZH4Q99393 312 aa5.15□□□□□ -1.58
MSH1YHR120W MSF1P08425 469 aa5.15□□□□□ -1.59
MSH1YHR120W CBF1P17106 351 aa5.15□□□□□ -1.59
MSH1YHR120W ADY2P25613 283 aa5.15□□□□□ -1.59
MSH1YHR120W KAP104P38217 918 aaKnown RBP5.15□□□□□ -1.59
MSH1YHR120W SPC97P38863 823 aa5.15□□□□□ -1.59
MSH1YHR120W VAC8P39968 578 aa5.15□□□□□ -1.59
MSH1YHR120W YIL001WP40560 513 aa5.15□□□□□ -1.59
MSH1YHR120W EMW1P42842 904 aaKnown RBP5.15□□□□□ -1.59
MSH1YHR120W RRT5P43607 289 aa5.15□□□□□ -1.59
MSH1YHR120W YJR142WP47173 342 aa5.15□□□□□ -1.59
MSH1YHR120W CAF120P53836 1060 aa5.15□□□□□ -1.59
MSH1YHR120W YML053CQ04978 212 aa5.15□□□□□ -1.59
MSH1YHR120W GRX8Q05926 109 aa5.15□□□□□ -1.59
MSH1YHR120W LCB5Q06147 687 aaKnown RBP5.15□□□□□ -1.59
MSH1YHR120W YSH1Q06224 779 aaPredicted RBP5.15□□□□□ -1.59
MSH1YHR120W OSW1Q08692 278 aa5.15□□□□□ -1.59
MSH1YHR120W RIB2Q12362 591 aaKnown RBP5.15□□□□□ -1.59
MSH1YHR120W FMP27Q06179 2628 aa5.15□□□□□ -1.59
MSH1YHR120W CAN1P04817 590 aa5.14□□□□□ -1.59
MSH1YHR120W TUB3P09734 445 aaKnown RBP5.14□□□□□ -1.59
MSH1YHR120W HXT3P32466 567 aaKnown RBP5.14□□□□□ -1.59
MSH1YHR120W STE13P33894 931 aa5.14□□□□□ -1.59
MSH1YHR120W POP4P38336 279 aa5.14□□□□□ -1.59
MSH1YHR120W PYK2P52489 506 aaKnown RBP5.14□□□□□ -1.59
MSH1YHR120W TAF6P53040 516 aa5.14□□□□□ -1.59
MSH1YHR120W SLT2Q00772 484 aa5.14□□□□□ -1.59
MSH1YHR120W ADI1Q03677 179 aa5.14□□□□□ -1.59
MSH1YHR120W INP2Q03824 705 aa5.14□□□□□ -1.59
MSH1YHR120W YMR027WQ04371 470 aa5.14□□□□□ -1.59
MSH1YHR120W ACM1Q08981 209 aa5.14□□□□□ -1.59
MSH1YHR120W MRPL25P23369 157 aa5.14□□□□□ -1.59
MSH1YHR120W TPS2P31688 896 aaKnown RBP5.14□□□□□ -1.59
MSH1YHR120W PBP2P38151 413 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
MSH1YHR120W CRP1P38845 465 aaKnown RBP5.14□□□□□ -1.59
MSH1YHR120W PEX15Q08215 383 aa5.14□□□□□ -1.59
MSH1YHR120W ALR1Q08269 859 aa5.14□□□□□ -1.59
MSH1YHR120W RSB1Q08417 382 aa5.14□□□□□ -1.59
MSH1YHR120W GPM3Q12326 303 aa5.14□□□□□ -1.59
MSH1YHR120W VAN1P23642 535 aa5.14□□□□□ -1.59
MSH1YHR120W BUD14P27637 709 aa5.14□□□□□ -1.59
MSH1YHR120W MEI4P29467 408 aa5.14□□□□□ -1.59
MSH1YHR120W AIM26P32858 118 aa5.14□□□□□ -1.59
MSH1YHR120W FUI1P38196 639 aa5.14□□□□□ -1.59
MSH1YHR120W FZO1P38297 855 aa5.14□□□□□ -1.59
MSH1YHR120W PCA1P38360 1216 aa5.14□□□□□ -1.59
MSH1YHR120W GDH3P39708 457 aa5.14□□□□□ -1.59
MSH1YHR120W AMA1P50082 593 aa5.14□□□□□ -1.59
MSH1YHR120W NNF2P53253 936 aa5.14□□□□□ -1.59
MSH1YHR120W TDA7P53882 636 aaPredicted RBP5.14□□□□□ -1.59
MSH1YHR120W MFB1Q04922 465 aa5.14□□□□□ -1.59
MSH1YHR120W THI7Q05998 598 aa5.14□□□□□ -1.59
MSH1YHR120W CLP1Q08685 445 aaPredicted RBP5.14□□□□□ -1.59
MSH1YHR120W RAD10P06838 210 aa5.13□□□□□ -1.59
MSH1YHR120W KAR4P25583 335 aa5.13□□□□□ -1.59
MSH1YHR120W YCR015CP25616 317 aa5.13□□□□□ -1.59
MSH1YHR120W MRPL40P36534 297 aa5.13□□□□□ -1.59
MSH1YHR120W AIM18P38884 321 aa5.13□□□□□ -1.59
MSH1YHR120W YEL028WP39989 153 aa5.13□□□□□ -1.59
MSH1YHR120W ZIP2P53061 704 aa5.13□□□□□ -1.59
MSH1YHR120W YNR063WP53749 607 aa5.13□□□□□ -1.59
MSH1YHR120W GTB1Q04924 702 aa5.13□□□□□ -1.59
MSH1YHR120W TPO1Q07824 586 aa5.13□□□□□ -1.59
MSH1YHR120W YLR046CQ12253 270 aa5.13□□□□□ -1.59
MSH1YHR120W ENO1P00924 437 aaKnown RBP5.13□□□□□ -1.59
MSH1YHR120W MIS1P09440 975 aaKnown RBP5.13□□□□□ -1.59
MSH1YHR120W YJU3P28321 313 aa5.13□□□□□ -1.59
MSH1YHR120W GUT1P32190 709 aa5.13□□□□□ -1.59
MSH1YHR120W LIN1P38852 340 aaPredicted RBP5.13□□□□□ -1.59
MSH1YHR120W ARG2P40360 574 aa5.13□□□□□ -1.59
MSH1YHR120W RPS10BP46784 105 aaKnown RBP5.13□□□□□ -1.59
MSH1YHR120W SAE2P46946 345 aa5.13□□□□□ -1.59
MSH1YHR120W MNN11P46985 422 aaKnown RBP5.13□□□□□ -1.59
MSH1YHR120W PCL10P53124 433 aa5.13□□□□□ -1.59
MSH1YHR120W DOS2P54858 310 aa5.13□□□□□ -1.59
MSH1YHR120W FMN1Q03778 218 aa5.13□□□□□ -1.59
MSH1YHR120W RPS10AQ08745 105 aaPredicted RBP5.13□□□□□ -1.59
MSH1YHR120W PER33Q12144 273 aa5.13□□□□□ -1.59
MSH1YHR120W BMT6Q12291 365 aa5.13□□□□□ -1.59
MSH1YHR120W NOT5Q12514 560 aaPredicted RBP5.13□□□□□ -1.59
MSH1YHR120W YPT6Q99260 215 aa5.13□□□□□ -1.59
MSH1YHR120W SEC63P14906 663 aa5.12□□□□□ -1.59
MSH1YHR120W DAL81P21657 970 aa5.12□□□□□ -1.59
MSH1YHR120W GEX1P25596 615 aa5.12□□□□□ -1.59
MSH1YHR120W RPL5P26321 297 aaKnown RBP5.12□□□□□ -1.59
MSH1YHR120W KAR9P32526 644 aa5.12□□□□□ -1.59
MSH1YHR120W MRE11P32829 692 aa5.12□□□□□ -1.59
MSH1YHR120W CSE1P33307 960 aa5.12□□□□□ -1.59
MSH1YHR120W ADD66P36040 267 aa5.12□□□□□ -1.59
MSH1YHR120W GEX2P36173 615 aa5.12□□□□□ -1.59
MSH1YHR120W BIT2P38346 545 aa5.12□□□□□ -1.59
MSH1YHR120W RFC3P38629 340 aa5.12□□□□□ -1.59
MSH1YHR120W SRP68P38687 599 aaKnown RBP5.12□□□□□ -1.59
MSH1YHR120W FLC2P39719 783 aa5.12□□□□□ -1.59
MSH1YHR120W SAW1P39735 261 aa5.12□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 85.4 ms