RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W RPF2P36160 344 aaKnown RBP3.42□□□□□ -1.86
CIC1YHR052W TOM71P38825 639 aaKnown RBP3.42□□□□□ -1.86
CIC1YHR052W ASK10P48361 1146 aa3.42□□□□□ -1.86
CIC1YHR052W LYS20P48570 428 aaKnown RBP3.42□□□□□ -1.86
CIC1YHR052W CEG1Q01159 459 aaPredicted RBP3.42□□□□□ -1.86
CIC1YHR052W NUP53Q03790 475 aa3.42□□□□□ -1.86
CIC1YHR052W YBR255C-AQ3E776 120 aa3.42□□□□□ -1.86
CIC1YHR052W SSB1P11484 613 aaKnown RBP3.41□□□□□ -1.86
CIC1YHR052W SIP1P32578 815 aa3.41□□□□□ -1.86
CIC1YHR052W GND1P38720 489 aaKnown RBP3.41□□□□□ -1.86
CIC1YHR052W SSB2P40150 613 aaKnown RBP3.41□□□□□ -1.86
CIC1YHR052W MDV1P47025 714 aa3.41□□□□□ -1.86
CIC1YHR052W ORC5P50874 479 aa3.41□□□□□ -1.86
CIC1YHR052W ARP7Q12406 477 aa3.41□□□□□ -1.86
CIC1YHR052W ILV2P07342 687 aaKnown RBP3.4□□□□□ -1.87
CIC1YHR052W FRD1P32614 470 aaKnown RBP3.4□□□□□ -1.87
CIC1YHR052W YIR016WP40572 265 aa3.4□□□□□ -1.87
CIC1YHR052W YJL107CP42947 387 aa3.4□□□□□ -1.87
CIC1YHR052W NPA3P47122 385 aa3.4□□□□□ -1.87
CIC1YHR052W ATX2Q12067 313 aa3.4□□□□□ -1.87
CIC1YHR052W SEC18P18759 758 aaKnown RBP3.39□□□□□ -1.87
CIC1YHR052W CNA1P23287 553 aa3.39□□□□□ -1.87
CIC1YHR052W PTC6P25646 442 aa3.39□□□□□ -1.87
CIC1YHR052W SWC3P31376 625 aa3.39□□□□□ -1.87
CIC1YHR052W YIL152WP40455 235 aa3.39□□□□□ -1.87
CIC1YHR052W SNA4Q07549 140 aa3.39□□□□□ -1.87
CIC1YHR052W DSE3Q08729 430 aa3.39□□□□□ -1.87
CIC1YHR052W BUD7Q08754 746 aa3.39□□□□□ -1.87
CIC1YHR052W LEA1Q08963 238 aaPredicted RBP3.39□□□□□ -1.87
CIC1YHR052W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
CIC1YHR052W RRI1Q12468 440 aa3.39□□□□□ -1.87
CIC1YHR052W SCO2P38072 301 aa3.38□□□□□ -1.87
CIC1YHR052W ARN1P38731 627 aa3.38□□□□□ -1.87
CIC1YHR052W CDC1P40986 491 aa3.38□□□□□ -1.87
CIC1YHR052W YPT11P48559 417 aa3.38□□□□□ -1.87
CIC1YHR052W YRB30P53107 440 aaPredicted RBP3.38□□□□□ -1.87
CIC1YHR052W YGR079WP53249 370 aa3.38□□□□□ -1.87
CIC1YHR052W TGL2P54857 326 aa3.38□□□□□ -1.87
CIC1YHR052W THI3Q07471 609 aa3.38□□□□□ -1.87
CIC1YHR052W SRL1Q08673 210 aa3.38□□□□□ -1.87
CIC1YHR052W ICL2Q12031 575 aa3.38□□□□□ -1.87
CIC1YHR052W LAC1P28496 418 aa3.37□□□□□ -1.87
CIC1YHR052W STT3P39007 718 aaKnown RBP3.37□□□□□ -1.87
CIC1YHR052W MAD3P47074 515 aa3.37□□□□□ -1.87
CIC1YHR052W BOP3P53958 396 aa3.37□□□□□ -1.87
CIC1YHR052W MLH2Q07980 695 aa3.37□□□□□ -1.87
CIC1YHR052W UBX3Q12229 455 aa3.37□□□□□ -1.87
CIC1YHR052W SIR1P21691 654 aa3.36□□□□□ -1.87
CIC1YHR052W MSS51P32335 436 aa3.36□□□□□ -1.87
CIC1YHR052W NIC96P34077 839 aa3.36□□□□□ -1.87
CIC1YHR052W HES1P35843 434 aa3.36□□□□□ -1.87
CIC1YHR052W YAT2P40017 923 aa3.36□□□□□ -1.87
CIC1YHR052W TPA1P40032 644 aaKnown RBP3.36□□□□□ -1.87
CIC1YHR052W YPR003CP53394 754 aa3.36□□□□□ -1.87
CIC1YHR052W YNL144CP53907 740 aa3.36□□□□□ -1.87
CIC1YHR052W COX1P00401 534 aa3.35□□□□□ -1.87
CIC1YHR052W FUN12P39730 1002 aaKnown RBP3.35□□□□□ -1.87
CIC1YHR052W CAB2P40506 365 aa3.35□□□□□ -1.87
CIC1YHR052W TAM41P53230 385 aa3.35□□□□□ -1.87
CIC1YHR052W YPL108WQ02872 168 aaPredicted RBP3.35□□□□□ -1.87
CIC1YHR052W GTB1Q04924 702 aa3.35□□□□□ -1.87
CIC1YHR052W EIS1Q05050 843 aaKnown RBP3.35□□□□□ -1.87
CIC1YHR052W ECM22Q05958 814 aaPredicted RBP3.35□□□□□ -1.87
CIC1YHR052W NDD1Q08887 554 aa3.35□□□□□ -1.87
CIC1YHR052W YOL114CQ12322 202 aa3.35□□□□□ -1.87
CIC1YHR052W MCM3P24279 971 aaKnown RBP3.34□□□□□ -1.87
CIC1YHR052W YCR043CP25361 127 aa3.34□□□□□ -1.87
CIC1YHR052W OCT1P35999 772 aa3.34□□□□□ -1.87
CIC1YHR052W ARC40P38328 384 aaKnown RBP3.34□□□□□ -1.87
CIC1YHR052W EAF7P53911 425 aaKnown RBP3.34□□□□□ -1.87
CIC1YHR052W SND1Q04007 877 aa3.34□□□□□ -1.87
CIC1YHR052W YMR034CQ05131 434 aaPredicted RBP3.34□□□□□ -1.87
CIC1YHR052W PDR8Q06149 701 aa3.34□□□□□ -1.87
CIC1YHR052W MPD2Q99316 277 aa3.34□□□□□ -1.87
CIC1YHR052W RIT1P23796 513 aa3.33□□□□□ -1.88
CIC1YHR052W URK1P27515 501 aa3.33□□□□□ -1.88
CIC1YHR052W VPS41P38959 992 aa3.33□□□□□ -1.88
CIC1YHR052W TES1P41903 349 aaKnown RBP3.33□□□□□ -1.88
CIC1YHR052W UBX6P47049 396 aa3.33□□□□□ -1.88
CIC1YHR052W PIG1Q06216 648 aa3.33□□□□□ -1.88
CIC1YHR052W GSH2Q08220 491 aa3.33□□□□□ -1.88
CIC1YHR052W SST2P11972 698 aaKnown RBP3.32□□□□□ -1.88
CIC1YHR052W PHM8P40025 321 aa3.32□□□□□ -1.88
CIC1YHR052W PEX8P53248 589 aa3.32□□□□□ -1.88
CIC1YHR052W BRE1Q07457 700 aaKnown RBP3.32□□□□□ -1.88
CIC1YHR052W IWR1Q07532 353 aaPredicted RBP3.32□□□□□ -1.88
CIC1YHR052W MCH4Q08268 501 aa3.32□□□□□ -1.88
CIC1YHR052W RVB2Q12464 471 aaKnown RBP3.32□□□□□ -1.88
CIC1YHR052W ADE3P07245 946 aaKnown RBP3.31□□□□□ -1.88
CIC1YHR052W RPL42AP0CX27 106 aaKnown RBP3.31□□□□□ -1.88
CIC1YHR052W RPL42BP0CX28 106 aaKnown RBP3.31□□□□□ -1.88
CIC1YHR052W YFL068WP0CX99 160 aa3.31□□□□□ -1.88
CIC1YHR052W YLL066W-AP0CY00 160 aa3.31□□□□□ -1.88
CIC1YHR052W YLL067W-AP0CY01 160 aa3.31□□□□□ -1.88
CIC1YHR052W PCT1P13259 424 aa3.31□□□□□ -1.88
CIC1YHR052W POL3P15436 1097 aa3.31□□□□□ -1.88
CIC1YHR052W SWI4P25302 1093 aaKnown RBP3.31□□□□□ -1.88
CIC1YHR052W APM3P38153 483 aa3.31□□□□□ -1.88
CIC1YHR052W BUD16P39988 312 aa3.31□□□□□ -1.88
CIC1YHR052W IMA1P53051 589 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms