RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C YPL191CQ08930 360 aa2.98□□□□□ -1.93
RTR1YER139C ADR1P07248 1323 aa2.97□□□□□ -1.93
RTR1YER139C YCR061WP25639 631 aa2.97□□□□□ -1.93
RTR1YER139C FAA2P39518 744 aa2.97□□□□□ -1.93
RTR1YER139C PEA2P40091 420 aa2.97□□□□□ -1.93
RTR1YER139C CDC1P40986 491 aa2.97□□□□□ -1.93
RTR1YER139C AZF1P41696 914 aa2.97□□□□□ -1.93
RTR1YER139C IDS2P46958 469 aa2.97□□□□□ -1.93
RTR1YER139C CUL3P53202 744 aa2.97□□□□□ -1.93
RTR1YER139C ESBP6P53918 673 aa2.97□□□□□ -1.93
RTR1YER139C YOR378WQ08902 515 aa2.97□□□□□ -1.93
RTR1YER139C TAH18Q12181 623 aa2.97□□□□□ -1.93
RTR1YER139C PTC6P25646 442 aa2.96□□□□□ -1.94
RTR1YER139C OCT1P35999 772 aa2.96□□□□□ -1.94
RTR1YER139C PSP1P50896 841 aaKnown RBP2.96□□□□□ -1.94
RTR1YER139C EAF7P53911 425 aaKnown RBP2.96□□□□□ -1.94
RTR1YER139C PDR8Q06149 701 aa2.96□□□□□ -1.94
RTR1YER139C REV1P12689 985 aa2.95□□□□□ -1.94
RTR1YER139C ERC1P38767 581 aa2.95□□□□□ -1.94
RTR1YER139C KRE9P39005 276 aa2.95□□□□□ -1.94
RTR1YER139C YPR003CP53394 754 aa2.95□□□□□ -1.94
RTR1YER139C CAC2Q04199 468 aa2.95□□□□□ -1.94
RTR1YER139C LEA1Q08963 238 aaPredicted RBP2.95□□□□□ -1.94
RTR1YER139C YML002WP0CF17 737 aa2.94□□□□□ -1.94
RTR1YER139C PRE2P30656 287 aaKnown RBP2.94□□□□□ -1.94
RTR1YER139C YJL070CP40361 888 aa2.94□□□□□ -1.94
RTR1YER139C UME1Q03010 460 aa2.94□□□□□ -1.94
RTR1YER139C YMR254CQ04838 102 aa2.94□□□□□ -1.94
RTR1YER139C HNM1P19807 563 aa2.93□□□□□ -1.94
RTR1YER139C DAL3P32459 195 aa2.93□□□□□ -1.94
RTR1YER139C GPP1P41277 250 aaKnown RBP2.93□□□□□ -1.94
RTR1YER139C GPG1P53130 126 aa2.93□□□□□ -1.94
RTR1YER139C DNM1P54861 757 aa2.93□□□□□ -1.94
RTR1YER139C ECI1Q05871 280 aa2.93□□□□□ -1.94
RTR1YER139C PIG1Q06216 648 aa2.93□□□□□ -1.94
RTR1YER139C POS5Q06892 414 aa2.93□□□□□ -1.94
RTR1YER139C MCH4Q08268 501 aa2.93□□□□□ -1.94
RTR1YER139C YPR027CQ12079 277 aa2.93□□□□□ -1.94
RTR1YER139C RTK1Q12100 620 aaPredicted RBP2.93□□□□□ -1.94
RTR1YER139C HOS1Q12214 470 aa2.93□□□□□ -1.94
RTR1YER139C CPR3P25719 182 aa2.92□□□□□ -1.94
RTR1YER139C PRP45P28004 379 aaPredicted RBP2.92□□□□□ -1.94
RTR1YER139C RPF2P36160 344 aaKnown RBP2.92□□□□□ -1.94
RTR1YER139C EAF5P39995 279 aa2.92□□□□□ -1.94
RTR1YER139C GSM1P42950 618 aa2.92□□□□□ -1.94
RTR1YER139C YNR071CP53757 342 aa2.92□□□□□ -1.94
RTR1YER139C CRF1Q04930 467 aa2.92□□□□□ -1.94
RTR1YER139C FAP7Q12055 197 aaPredicted RBP2.92□□□□□ -1.94
RTR1YER139C YBR298C-AQ8TGK4 73 aa2.92□□□□□ -1.94
RTR1YER139C NUP145P49687 1317 aa2.92□□□□□ -1.94
RTR1YER139C PMS1P14242 873 aa2.91□□□□□ -1.94
RTR1YER139C PET309P32522 965 aaPredicted RBP2.91□□□□□ -1.94
RTR1YER139C RRP14P36080 434 aaKnown RBP2.91□□□□□ -1.94
RTR1YER139C UBP8P50102 471 aa2.91□□□□□ -1.94
RTR1YER139C TLG2Q08144 397 aa2.91□□□□□ -1.94
RTR1YER139C CWC2Q12046 339 aaPredicted RBP2.91□□□□□ -1.94
RTR1YER139C SIP1P32578 815 aa2.9□□□□□ -1.95
RTR1YER139C TIF3P34167 436 aaKnown RBP2.9□□□□□ -1.95
RTR1YER139C MAD2P40958 196 aa2.9□□□□□ -1.95
RTR1YER139C IML2P47031 731 aa2.9□□□□□ -1.95
RTR1YER139C ALG12P53730 551 aa2.9□□□□□ -1.95
RTR1YER139C PMT3P47190 753 aa2.89□□□□□ -1.95
RTR1YER139C SKY1Q03656 742 aa2.89□□□□□ -1.95
RTR1YER139C FRE3Q08905 711 aa2.89□□□□□ -1.95
RTR1YER139C DIN7Q12086 430 aa2.89□□□□□ -1.95
RTR1YER139C RAD24P32641 659 aa2.88□□□□□ -1.95
RTR1YER139C YHR218WP38899 603 aa2.88□□□□□ -1.95
RTR1YER139C NPA3P47122 385 aa2.88□□□□□ -1.95
RTR1YER139C SHE10P53075 577 aa2.88□□□□□ -1.95
RTR1YER139C ADD37Q03233 198 aa2.88□□□□□ -1.95
RTR1YER139C TRS31Q03337 283 aa2.88□□□□□ -1.95
RTR1YER139C SWF1Q04629 336 aa2.88□□□□□ -1.95
RTR1YER139C CBP1P07252 654 aa2.87□□□□□ -1.95
RTR1YER139C BAR1P12630 587 aa2.87□□□□□ -1.95
RTR1YER139C MGR1P25573 417 aa2.87□□□□□ -1.95
RTR1YER139C AVT5P38176 459 aa2.87□□□□□ -1.95
RTR1YER139C ARB1P40024 610 aaKnown RBP2.87□□□□□ -1.95
RTR1YER139C DAP1Q12091 152 aa2.87□□□□□ -1.95
RTR1YER139C GPA1P08539 472 aa2.86□□□□□ -1.95
RTR1YER139C PDA1P16387 420 aaKnown RBP2.86□□□□□ -1.95
RTR1YER139C YCR006CP25350 157 aa2.86□□□□□ -1.95
RTR1YER139C MRPL4P36517 319 aa2.86□□□□□ -1.95
RTR1YER139C VFA1P40080 203 aa2.86□□□□□ -1.95
RTR1YER139C ATG27P46989 271 aa2.86□□□□□ -1.95
RTR1YER139C RPS7AP26786 190 aaKnown RBP2.85□□□□□ -1.95
RTR1YER139C PRO3P32263 286 aaKnown RBP2.85□□□□□ -1.95
RTR1YER139C PCA1P38360 1216 aa2.85□□□□□ -1.95
RTR1YER139C GPP2P40106 250 aaKnown RBP2.85□□□□□ -1.95
RTR1YER139C YRB30P53107 440 aaPredicted RBP2.85□□□□□ -1.95
RTR1YER139C YNL181WP53878 407 aa2.85□□□□□ -1.95
RTR1YER139C SMA1Q02651 245 aa2.85□□□□□ -1.95
RTR1YER139C BSC6Q08280 497 aa2.85□□□□□ -1.95
RTR1YER139C RMP1Q12530 201 aa2.85□□□□□ -1.95
RTR1YER139C CYB2P00175 591 aa2.84□□□□□ -1.95
RTR1YER139C LAC1P28496 418 aa2.84□□□□□ -1.95
RTR1YER139C LEU5P38702 357 aa2.84□□□□□ -1.95
RTR1YER139C YEL068CP39977 110 aa2.84□□□□□ -1.95
RTR1YER139C PDE1P22434 369 aa2.83□□□□□ -1.96
RTR1YER139C PPG1P32838 368 aa2.83□□□□□ -1.96
RTR1YER139C STL1P39932 569 aa2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms