RNA–Protein interactions for RNA: YAR003W

SWD1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD1, Length 1,281 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD1YAR003W NDJ1Q12366 352 aa6.86□□□□□ -1.31
SWD1YAR003W RAD1P06777 1100 aa6.85□□□□□ -1.31
SWD1YAR003W YML002WP0CF17 737 aa6.85□□□□□ -1.31
SWD1YAR003W ADH4P10127 382 aa6.85□□□□□ -1.31
SWD1YAR003W CDC24P11433 854 aaPredicted RBP6.85□□□□□ -1.31
SWD1YAR003W MTF1P14908 341 aaKnown RBP6.85□□□□□ -1.31
SWD1YAR003W RAD16P31244 790 aa6.85□□□□□ -1.31
SWD1YAR003W ISC10P32645 267 aa6.85□□□□□ -1.31
SWD1YAR003W SEC6P32844 805 aa6.85□□□□□ -1.31
SWD1YAR003W SGE1P33335 543 aa6.85□□□□□ -1.31
SWD1YAR003W BIT2P38346 545 aa6.85□□□□□ -1.31
SWD1YAR003W STB5P38699 743 aa6.85□□□□□ -1.31
SWD1YAR003W STL1P39932 569 aa6.85□□□□□ -1.31
SWD1YAR003W VAC8P39968 578 aa6.85□□□□□ -1.31
SWD1YAR003W SCC4P40090 624 aa6.85□□□□□ -1.31
SWD1YAR003W MND2P40577 368 aa6.85□□□□□ -1.31
SWD1YAR003W MKT1P40850 830 aaKnown RBP6.85□□□□□ -1.31
SWD1YAR003W YGR127WP53275 312 aa6.85□□□□□ -1.31
SWD1YAR003W GRX8Q05926 109 aa6.85□□□□□ -1.31
SWD1YAR003W STE23Q06010 1027 aa6.85□□□□□ -1.31
SWD1YAR003W HOS1Q12214 470 aa6.85□□□□□ -1.31
SWD1YAR003W GCR1P07261 785 aa6.84□□□□□ -1.31
SWD1YAR003W MRPL25P23369 157 aa6.84□□□□□ -1.31
SWD1YAR003W PEX34P25584 144 aa6.84□□□□□ -1.31
SWD1YAR003W ADY2P25613 283 aa6.84□□□□□ -1.31
SWD1YAR003W YCR015CP25616 317 aa6.84□□□□□ -1.31
SWD1YAR003W YME1P32795 747 aa6.84□□□□□ -1.31
SWD1YAR003W PEX5P35056 612 aa6.84□□□□□ -1.31
SWD1YAR003W KTR4P38131 464 aa6.84□□□□□ -1.31
SWD1YAR003W FUI1P38196 639 aa6.84□□□□□ -1.31
SWD1YAR003W URA8P38627 578 aaPredicted RBP6.84□□□□□ -1.31
SWD1YAR003W RIM4P38741 713 aa6.84□□□□□ -1.31
SWD1YAR003W OTU2P38747 307 aaKnown RBP6.84□□□□□ -1.31
SWD1YAR003W SFB3P38810 929 aa6.84□□□□□ -1.31
SWD1YAR003W YEL028WP39989 153 aa6.84□□□□□ -1.31
SWD1YAR003W MOB1P40484 314 aa6.84□□□□□ -1.31
SWD1YAR003W OYE3P41816 400 aaPredicted RBP6.84□□□□□ -1.31
SWD1YAR003W BST1P43571 1029 aa6.84□□□□□ -1.31
SWD1YAR003W RRT5P43607 289 aa6.84□□□□□ -1.31
SWD1YAR003W PRP24P49960 444 aaKnown RBP6.84□□□□□ -1.31
SWD1YAR003W SHR3Q02774 210 aa6.84□□□□□ -1.31
SWD1YAR003W TDA6Q06466 467 aa6.84□□□□□ -1.31
SWD1YAR003W GPM3Q12326 303 aa6.84□□□□□ -1.31
SWD1YAR003W LPX1Q12405 387 aaKnown RBP6.84□□□□□ -1.31
SWD1YAR003W RRD2Q12461 358 aa6.84□□□□□ -1.31
SWD1YAR003W YPR053CQ6Q5F3 151 aa6.84□□□□□ -1.31
SWD1YAR003W YLR422WQ06409 1932 aa6.84□□□□□ -1.32
SWD1YAR003W CMD1P06787 147 aaKnown RBP6.83□□□□□ -1.32
SWD1YAR003W PEP5P12868 1029 aa6.83□□□□□ -1.32
SWD1YAR003W KAR4P25583 335 aa6.83□□□□□ -1.32
SWD1YAR003W GPI10P30777 616 aa6.83□□□□□ -1.32
SWD1YAR003W HXT3P32466 567 aaKnown RBP6.83□□□□□ -1.32
SWD1YAR003W MRS6P32864 603 aaKnown RBP6.83□□□□□ -1.32
SWD1YAR003W KES1P35844 434 aaKnown RBP6.83□□□□□ -1.32
SWD1YAR003W ADD66P36040 267 aa6.83□□□□□ -1.32
SWD1YAR003W DUG2P38149 878 aa6.83□□□□□ -1.32
SWD1YAR003W ATG12P38316 186 aa6.83□□□□□ -1.32
SWD1YAR003W SRP68P38687 599 aaKnown RBP6.83□□□□□ -1.32
SWD1YAR003W EDC3P39998 551 aaKnown RBP6.83□□□□□ -1.32
SWD1YAR003W LSB6P42951 607 aa6.83□□□□□ -1.32
SWD1YAR003W ROK1P45818 564 aaPredicted RBP6.83□□□□□ -1.32
SWD1YAR003W RPS10BP46784 105 aaKnown RBP6.83□□□□□ -1.32
SWD1YAR003W ALY2P47029 1046 aa6.83□□□□□ -1.32
SWD1YAR003W IML2P47031 731 aa6.83□□□□□ -1.32
SWD1YAR003W YJL045WP47052 634 aa6.83□□□□□ -1.32
SWD1YAR003W MRX6P48564 524 aa6.83□□□□□ -1.32
SWD1YAR003W YNR040WP53736 256 aa6.83□□□□□ -1.32
SWD1YAR003W YNL144CP53907 740 aa6.83□□□□□ -1.32
SWD1YAR003W ARA2Q04212 335 aa6.83□□□□□ -1.32
SWD1YAR003W YMR027WQ04371 470 aa6.83□□□□□ -1.32
SWD1YAR003W PNP1Q05788 311 aa6.83□□□□□ -1.32
SWD1YAR003W NRT1Q08485 598 aa6.83□□□□□ -1.32
SWD1YAR003W RPS10AQ08745 105 aaPredicted RBP6.83□□□□□ -1.32
SWD1YAR003W NDI1P32340 513 aa6.82□□□□□ -1.32
SWD1YAR003W MUD2P36084 527 aaKnown RBP6.82□□□□□ -1.32
SWD1YAR003W KAP104P38217 918 aaKnown RBP6.82□□□□□ -1.32
SWD1YAR003W MSR1P38714 643 aa6.82□□□□□ -1.32
SWD1YAR003W CCT2P39076 527 aaKnown RBP6.82□□□□□ -1.32
SWD1YAR003W SAP1P39955 897 aaKnown RBP6.82□□□□□ -1.32
SWD1YAR003W RPS0BP46654 252 aaKnown RBP6.82□□□□□ -1.32
SWD1YAR003W TAN1P53072 289 aaPredicted RBP6.82□□□□□ -1.32
SWD1YAR003W KTR5P53966 522 aaPredicted RBP6.82□□□□□ -1.32
SWD1YAR003W TOF2Q02208 771 aa6.82□□□□□ -1.32
SWD1YAR003W ENT5Q03769 411 aaKnown RBP6.82□□□□□ -1.32
SWD1YAR003W OMS1Q06668 471 aa6.82□□□□□ -1.32
SWD1YAR003W YPQ1Q12010 308 aa6.82□□□□□ -1.32
SWD1YAR003W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
SWD1YAR003W AVL9Q12500 764 aa6.82□□□□□ -1.32
SWD1YAR003W YKL068W-AQ3E826 78 aa6.82□□□□□ -1.32
SWD1YAR003W AI5_ALPHAQ9ZZX1 630 aa6.82□□□□□ -1.32
SWD1YAR003W IMA3P0CW40 589 aa6.81□□□□□ -1.32
SWD1YAR003W IMA4P0CW41 589 aa6.81□□□□□ -1.32
SWD1YAR003W APE1P14904 514 aa6.81□□□□□ -1.32
SWD1YAR003W URA7P28274 579 aaKnown RBP6.81□□□□□ -1.32
SWD1YAR003W GIP1P38229 639 aa6.81□□□□□ -1.32
SWD1YAR003W SAF1P38352 637 aa6.81□□□□□ -1.32
SWD1YAR003W YIL161WP40449 235 aaKnown RBP6.81□□□□□ -1.32
SWD1YAR003W UBP7P40453 1071 aa6.81□□□□□ -1.32
SWD1YAR003W ZIP2P53061 704 aa6.81□□□□□ -1.32
SWD1YAR003W COQ6P53318 479 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 110.6 ms