RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 ABCF2Q9UG63 623 aa12.1□□□□□ -0.47
PHGDH-212ENST00000641247 PRUNE2Q8WUY3 3088 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 MAPK4P31152 587 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 CYP2C19P33261 490 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-212ENST00000641247 MECOMQ03112 1051 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 RASGRF1Q13972 1273 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 ANO1Q5XXA6 986 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 TRMT44Q8IYL2 757 aaKnown RBP12.09□□□□□ -0.47
PHGDH-212ENST00000641247 LPAR1Q92633 364 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
PHGDH-212ENST00000641247 APBA2Q99767 749 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 PAGR1Q9BTK6 254 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 SIL1Q9H173 461 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 DNAJC18Q9H819 358 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 PRDM5Q9NQX1 630 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-212ENST00000641247 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-212ENST00000641247 MROH7-TTC4A0A0A0MT08 1334 aa12.09□□□□□ -0.47
PHGDH-212ENST00000641247 DOCK1Q14185 1865 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 AK9Q5TCS8 1911 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 DNM1LO00429 736 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
PHGDH-212ENST00000641247 TIMM10P62072 90 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 MAP2K5Q13163 448 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 PDE3AQ14432 1141 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 TRIM60Q495X7 471 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 WDR63Q8IWG1 891 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 BCL11AQ9H165 835 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 PDLIM7Q9NR12 457 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
PHGDH-212ENST00000641247 PRKAG2Q9UGJ0 569 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 DOCK2Q92608 1830 aa12.08□□□□□ -0.48
PHGDH-212ENST00000641247 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 LAMA2P24043 3122 aaKnown RBP12.07□□□□□ -0.48
PHGDH-212ENST00000641247 TMEM265A0A087WTH1 108 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 SEMA3EO15041 775 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 ZBTB22O15209 634 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 CNGA1P29973 690 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
PHGDH-212ENST00000641247 SNX17Q15036 470 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 NCBP3Q53F19 620 aaKnown RBP12.07□□□□□ -0.48
PHGDH-212ENST00000641247 TBC1D9Q6ZT07 1266 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 DZIP1Q86YF9 867 aaKnown RBP12.07□□□□□ -0.48
PHGDH-212ENST00000641247 MRPL50Q8N5N7 158 aaKnown RBP12.07□□□□□ -0.48
PHGDH-212ENST00000641247 TBC1D2Q9BYX2 928 aa12.07□□□□□ -0.48
PHGDH-212ENST00000641247 PA2G4Q9UQ80 394 aaKnown RBP12.07□□□□□ -0.48
PHGDH-212ENST00000641247 GDF11O95390 407 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 PTPREP23469 700 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 PI16Q6UXB8 463 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 PPM1EQ8WY54 764 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
PHGDH-212ENST00000641247 FAM122AQ96E09 287 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 AS3MTQ9HBK9 375 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 TMOD4Q9NZQ9 345 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 CEP126Q9P2H0 1117 aa12.06□□□□□ -0.48
PHGDH-212ENST00000641247 MAST2Q6P0Q8 1798 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 LTBP2Q14767 1821 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 CYBAP13498 195 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 MFSD14CQ5VZR4 134 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 FAM9BQ8IZU0 186 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 FERMT2Q96AC1 680 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
PHGDH-212ENST00000641247 C19orf81C9J6K1 198 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 USP17L10C9JJH3 530 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 CIAO1O76071 339 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 HOXC6P09630 235 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 ADCYAP1R1P41586 468 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 TLE2Q04725 743 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 CCAR1Q8IX12 1150 aaKnown RBP12.04□□□□□ -0.48
PHGDH-212ENST00000641247 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
PHGDH-212ENST00000641247 SH3RF3Q8TEJ3 882 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-212ENST00000641247 RNPC3Q96LT9 517 aaKnown RBP12.04□□□□□ -0.48
PHGDH-212ENST00000641247 NECAB3Q96P71 396 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-212ENST00000641247 ASB2Q96Q27 587 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 ZNF576Q9H609 170 aa12.04□□□□□ -0.48
PHGDH-212ENST00000641247 SLC15A5A6NIM6 579 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 DNAJB2P25686 324 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 PBX2P40425 430 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 ATP2B2Q01814 1243 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 ADGRE1Q14246 886 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 GRB14Q14449 540 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 METTL16Q86W50 562 aaKnown RBP12.03□□□□□ -0.48
PHGDH-212ENST00000641247 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 ADAMTS19Q8TE59 1207 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 XAGE2Q96GT9 111 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 PI4KBQ9UBF8 816 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
PHGDH-212ENST00000641247 RABGAP1Q9Y3P9 1069 aa12.03□□□□□ -0.48
PHGDH-212ENST00000641247 GRXCR1A8MXD5 290 aa12.02□□□□□ -0.49
PHGDH-212ENST00000641247 MSCO60682 206 aa12.02□□□□□ -0.49
PHGDH-212ENST00000641247 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-212ENST00000641247 ASNSP08243 561 aa12.02□□□□□ -0.49
PHGDH-212ENST00000641247 WDR78Q5VTH9 848 aa12.02□□□□□ -0.49
PHGDH-212ENST00000641247 SPTY2D1Q68D10 685 aaPredicted RBP12.02□□□□□ -0.49
PHGDH-212ENST00000641247 TEX11Q8IYF3 940 aa12.02□□□□□ -0.49
PHGDH-212ENST00000641247 ATXN2LQ8WWM7 1075 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms