RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 FAM181AQ8N9Y4 354 aa9.26□□□□□ -0.93
RFC1-217ENST00000639695 MKL1Q969V6 931 aa9.26□□□□□ -0.93
RFC1-217ENST00000639695 NT5C1AQ9BXI3 368 aa9.26□□□□□ -0.93
RFC1-217ENST00000639695 R3HCC1Q9Y3T6 440 aaKnown RBP9.26□□□□□ -0.93
RFC1-217ENST00000639695 CD96P40200 585 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 CDK5R2Q13319 367 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 PDE3AQ14432 1141 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
RFC1-217ENST00000639695 EAF1Q96JC9 268 aaPredicted RBP9.25□□□□□ -0.93
RFC1-217ENST00000639695 KRTAP4-9Q9BYQ8 210 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 TRIM55Q9BYV6 548 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 ZNF408Q9H9D4 720 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 ABCB6Q9NP58 842 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 GINM1Q9NU53 330 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 SIRPGQ9P1W8 387 aa9.25□□□□□ -0.93
RFC1-217ENST00000639695 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 F6X3S4 739 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 TMPRSS2O15393 492 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 LIG1P18858 919 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 ITPKAP23677 461 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 DIEXFQ68CQ4 756 aaKnown RBP9.24□□□□□ -0.93
RFC1-217ENST00000639695 TPTE2Q6XPS3 522 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 ZNF662Q6ZS27 426 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 ADAMTS6Q9UKP5 1117 aa9.24□□□□□ -0.93
RFC1-217ENST00000639695 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.24□□□□□ -0.93
RFC1-217ENST00000639695 FBXO24O75426 580 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 SOX9P48436 509 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 ZNF124Q15973 351 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 SNAP47Q5SQN1 464 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 HP1BP3Q5SSJ5 553 aaPredicted RBP9.23□□□□□ -0.93
RFC1-217ENST00000639695 EGFLAMQ63HQ2 1017 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 FBXL19Q6PCT2 694 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 ANKS3Q6ZW76 656 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 PHC3Q8NDX5 983 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 CCDC86Q9H6F5 360 aaKnown RBP9.23□□□□□ -0.93
RFC1-217ENST00000639695 KCNQ5Q9NR82 932 aa9.23□□□□□ -0.93
RFC1-217ENST00000639695 FAM87AP0C7U9 286 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 CD8BP10966 210 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 LMNB1P20700 586 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 LIG3P49916 1009 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 LMNB2Q03252 620 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 APOBRQ0VD83 1088 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 FAAP100Q0VG06 881 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 ZC3H12CQ9C0D7 883 aaKnown RBP9.22□□□□□ -0.93
RFC1-217ENST00000639695 MRVI1Q9Y6F6 885 aa9.22□□□□□ -0.93
RFC1-217ENST00000639695 ZNF862O60290 1169 aa9.21□□□□□ -0.94
RFC1-217ENST00000639695 GREM1O60565 184 aa9.21□□□□□ -0.94
RFC1-217ENST00000639695 PF4P02776 101 aa9.21□□□□□ -0.94
RFC1-217ENST00000639695 HSD3B2P26439 372 aa9.21□□□□□ -0.94
RFC1-217ENST00000639695 ZNF157P51786 506 aaPredicted RBP9.21□□□□□ -0.94
RFC1-217ENST00000639695 FAM160A1Q05DH4 1040 aa9.21□□□□□ -0.94
RFC1-217ENST00000639695 CAMK2GQ13555 558 aaPredicted RBP9.21□□□□□ -0.94
RFC1-217ENST00000639695 RHOVQ96L33 236 aa9.21□□□□□ -0.94
RFC1-217ENST00000639695 MBNL3Q9NUK0 354 aaKnown RBP9.21□□□□□ -0.94
RFC1-217ENST00000639695 CRIM1Q9NZV1 1036 aa9.21□□□□□ -0.94
RFC1-217ENST00000639695 LEFTY1O75610 366 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 RNASE1P07998 156 aaKnown RBP9.2□□□□□ -0.94
RFC1-217ENST00000639695 ETFBP38117 255 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 SERINC3Q13530 473 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 RPS26P11Q5JNZ5 115 aaPredicted RBP9.2□□□□□ -0.94
RFC1-217ENST00000639695 GOLM1Q8NBJ4 401 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 NKD1Q969G9 470 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 FANCD2OSQ96PS1 177 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 SRPK1Q96SB4 655 aaKnown RBP9.2□□□□□ -0.94
RFC1-217ENST00000639695 TLR6Q9Y2C9 796 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 ROBO2Q9HCK4 1378 aa9.2□□□□□ -0.94
RFC1-217ENST00000639695 FUT4P22083 530 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 RPS26P62854 115 aaKnown RBP9.19□□□□□ -0.94
RFC1-217ENST00000639695 TTBK2Q6IQ55 1244 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 STK11IPQ8N1F8 1099 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 NLGN1Q8N2Q7 840 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 DISC1Q9NRI5 854 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 UBP1Q9NZI7 540 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 SAMM50Q9Y512 469 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 PCDHGC5Q9Y5F6 944 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 SYNGAP1Q96PV0 1343 aa9.19□□□□□ -0.94
RFC1-217ENST00000639695 AP3B2Q13367 1082 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 RAB33AQ14088 237 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 CYP27C1Q4G0S4 372 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 PCNX4Q63HM2 1172 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 JAZF1Q86VZ6 243 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 DDX54Q8TDD1 881 aaKnown RBP9.18□□□□□ -0.94
RFC1-217ENST00000639695 NETO1Q8TDF5 533 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
RFC1-217ENST00000639695 SRRTQ9BXP5 876 aaKnown RBP9.18□□□□□ -0.94
RFC1-217ENST00000639695 MRPL42Q9Y6G3 142 aaKnown RBP9.18□□□□□ -0.94
RFC1-217ENST00000639695 CELA3AP09093 270 aa9.17□□□□□ -0.94
RFC1-217ENST00000639695 PPP2R3AQ06190 1150 aa9.17□□□□□ -0.94
RFC1-217ENST00000639695 TCEAL1Q15170 157 aa9.17□□□□□ -0.94
RFC1-217ENST00000639695 TNNI3KQ59H18 835 aa9.17□□□□□ -0.94
RFC1-217ENST00000639695 LRP10Q7Z4F1 713 aa9.17□□□□□ -0.94
RFC1-217ENST00000639695 CCDC84Q86UT8 332 aaPredicted RBP9.17□□□□□ -0.94
RFC1-217ENST00000639695 NECAB3Q96P71 396 aaPredicted RBP9.17□□□□□ -0.94
RFC1-217ENST00000639695 RC3H2Q9HBD1 1191 aaKnown RBP9.17□□□□□ -0.94
RFC1-217ENST00000639695 PRKAG3Q9UGI9 489 aa9.17□□□□□ -0.94
RFC1-217ENST00000639695 KLF4O43474 513 aa9.16□□□□□ -0.94
RFC1-217ENST00000639695 IBSPP21815 317 aaPredicted RBP9.16□□□□□ -0.94
RFC1-217ENST00000639695 GARTP22102 1010 aa9.16□□□□□ -0.94
RFC1-217ENST00000639695 FAM196AQ6ZSG2 479 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms