RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MBD4O95243 580 aa21.46■■□□□ 1.03
PNKP-230ENST00000638016 MYCP01106 439 aaPredicted RBP21.46■■□□□ 1.03
PNKP-230ENST00000638016 GH2P01242 217 aa21.46■■□□□ 1.03
PNKP-230ENST00000638016 KIF22Q14807 665 aa21.46■■□□□ 1.03
PNKP-230ENST00000638016 ECHDC1Q9NTX5 307 aa21.46■■□□□ 1.03
PNKP-230ENST00000638016 TNRC18O15417 2968 aaPredicted RBP21.45■■□□□ 1.03
PNKP-230ENST00000638016 ASNSP08243 561 aa21.45■■□□□ 1.02
PNKP-230ENST00000638016 OSBPP22059 807 aa21.45■■□□□ 1.02
PNKP-230ENST00000638016 CERS3Q8IU89 383 aa21.45■■□□□ 1.02
PNKP-230ENST00000638016 SH3TC2Q8TF17 1288 aa21.45■■□□□ 1.02
PNKP-230ENST00000638016 ARMC5Q96C12 935 aa21.45■■□□□ 1.02
PNKP-230ENST00000638016 CRNKL1Q9BZJ0 848 aaKnown RBP21.45■■□□□ 1.02
PNKP-230ENST00000638016 SERPINB13Q9UIV8 391 aa21.45■■□□□ 1.02
PNKP-230ENST00000638016 DOCK3Q8IZD9 2030 aa21.45■■□□□ 1.02
PNKP-230ENST00000638016 PEX10O60683 326 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 SHMT1P34896 483 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 TATDN1Q6P1N9 297 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 TMED8Q6PL24 325 aaPredicted RBP21.44■■□□□ 1.02
PNKP-230ENST00000638016 ANKRD13CQ8N6S4 541 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 PROCA1Q8NCQ7 364 aaPredicted RBP21.44■■□□□ 1.02
PNKP-230ENST00000638016 SMCR8Q8TEV9 937 aaPredicted RBP21.44■■□□□ 1.02
PNKP-230ENST00000638016 WDR18Q9BV38 432 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 EHD4Q9H223 541 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 AS3MTQ9HBK9 375 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 DCP1AQ9NPI6 582 aaPredicted RBP21.44■■□□□ 1.02
PNKP-230ENST00000638016 MCM9Q9NXL9 1143 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 SLC45A1Q9Y2W3 748 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 PDE4DIPQ5VU43 2346 aa21.44■■□□□ 1.02
PNKP-230ENST00000638016 MKI67P46013 3256 aaKnown RBP21.44■■□□□ 1.02
PNKP-230ENST00000638016 FMNL1O95466 1100 aaPredicted RBP21.43■■□□□ 1.02
PNKP-230ENST00000638016 POLR3DP05423 398 aaPredicted RBP21.43■■□□□ 1.02
PNKP-230ENST00000638016 SLC9C1Q4G0N8 1177 aa21.43■■□□□ 1.02
PNKP-230ENST00000638016 SH3D19Q5HYK7 790 aa21.43■■□□□ 1.02
PNKP-230ENST00000638016 TTC6Q86TZ1 520 aa21.43■■□□□ 1.02
PNKP-230ENST00000638016 SLC44A5Q8NCS7 719 aa21.43■■□□□ 1.02
PNKP-230ENST00000638016 ZNF333Q96JL9 665 aa21.43■■□□□ 1.02
PNKP-230ENST00000638016 CYP2D7A0A087X1C5 515 aa21.42■■□□□ 1.02
PNKP-230ENST00000638016 BACE1P56817 501 aa21.42■■□□□ 1.02
PNKP-230ENST00000638016 GABPAQ06546 454 aa21.42■■□□□ 1.02
PNKP-230ENST00000638016 ARHGEF6Q15052 776 aa21.42■■□□□ 1.02
PNKP-230ENST00000638016 ZYXQ15942 572 aaKnown RBP21.42■■□□□ 1.02
PNKP-230ENST00000638016 PUS7LQ9H0K6 701 aaKnown RBP21.42■■□□□ 1.02
PNKP-230ENST00000638016 ASCC2Q9H1I8 757 aaPredicted RBP21.42■■□□□ 1.02
PNKP-230ENST00000638016 SRRDQ9UH36 339 aa21.42■■□□□ 1.02
PNKP-230ENST00000638016 GABRQQ9UN88 632 aa21.42■■□□□ 1.02
PNKP-230ENST00000638016 RBBP6Q7Z6E9 1792 aaKnown RBP21.41■■□□□ 1.02
PNKP-230ENST00000638016 MYPNQ86TC9 1320 aa21.41■■□□□ 1.02
PNKP-230ENST00000638016 PRKCZQ05513 592 aa21.41■■□□□ 1.02
PNKP-230ENST00000638016 DYNLL2Q96FJ2 89 aa21.41■■□□□ 1.02
PNKP-230ENST00000638016 TBC1D2Q9BYX2 928 aa21.41■■□□□ 1.02
PNKP-230ENST00000638016 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.41■■□□□ 1.02
PNKP-230ENST00000638016 GUCY1A2P33402 732 aa21.4■■□□□ 1.02
PNKP-230ENST00000638016 UBE3CQ15386 1083 aa21.4■■□□□ 1.02
PNKP-230ENST00000638016 CERKLQ49MI3 558 aaPredicted RBP21.4■■□□□ 1.02
PNKP-230ENST00000638016 ACER1Q8TDN7 264 aa21.4■■□□□ 1.02
PNKP-230ENST00000638016 EMILIN3Q9NT22 766 aa21.4■■□□□ 1.02
PNKP-230ENST00000638016 MYH8P13535 1937 aa21.39■■□□□ 1.02
PNKP-230ENST00000638016 USP17L10C9JJH3 530 aa21.39■■□□□ 1.01
PNKP-230ENST00000638016 FCGRTP55899 365 aa21.39■■□□□ 1.01
PNKP-230ENST00000638016 RAB3GAP1Q15042 981 aa21.39■■□□□ 1.01
PNKP-230ENST00000638016 ABCB5Q2M3G0 1257 aa21.39■■□□□ 1.01
PNKP-230ENST00000638016 TMOD4Q9NZQ9 345 aa21.39■■□□□ 1.01
PNKP-230ENST00000638016 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
PNKP-230ENST00000638016 EN2P19622 333 aaPredicted RBP21.38■■□□□ 1.01
PNKP-230ENST00000638016 PI4K2BQ8TCG2 481 aa21.38■■□□□ 1.01
PNKP-230ENST00000638016 GNRH1P01148 92 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 SEPT2Q15019 361 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 MTFR1Q15390 333 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 CLEC10AQ8IUN9 316 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 KBTBD3Q8NAB2 608 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 RAET1EQ8TD07 263 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 OSBP2Q969R2 916 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 GPATCH3Q96I76 525 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 GINM1Q9NU53 330 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 SLC4A4Q9Y6R1 1079 aa21.37■■□□□ 1.01
PNKP-230ENST00000638016 C19orf81C9J6K1 198 aa21.36■■□□□ 1.01
PNKP-230ENST00000638016 IRX3P78415 501 aaPredicted RBP21.36■■□□□ 1.01
PNKP-230ENST00000638016 FAM110CQ1W6H9 321 aa21.36■■□□□ 1.01
PNKP-230ENST00000638016 POTEEQ6S8J3 1075 aa21.36■■□□□ 1.01
PNKP-230ENST00000638016 P2RX7Q99572 595 aaKnown RBP21.36■■□□□ 1.01
PNKP-230ENST00000638016 FEZ1Q99689 392 aa21.36■■□□□ 1.01
PNKP-230ENST00000638016 TXNRD2Q9NNW7 524 aa21.36■■□□□ 1.01
PNKP-230ENST00000638016 USP17L12C9JPN9 530 aa21.35■■□□□ 1.01
PNKP-230ENST00000638016 USP17L21D6R901 530 aa21.35■■□□□ 1.01
PNKP-230ENST00000638016 MPHOSPH10O00566 681 aaKnown RBP21.35■■□□□ 1.01
PNKP-230ENST00000638016 TNPO2O14787 897 aaKnown RBP21.35■■□□□ 1.01
PNKP-230ENST00000638016 HOXD10P28358 340 aa21.35■■□□□ 1.01
PNKP-230ENST00000638016 PRMT2P55345 433 aa21.35■■□□□ 1.01
PNKP-230ENST00000638016 ATP8A2Q9NTI2 1148 aa21.35■■□□□ 1.01
PNKP-230ENST00000638016 SALL3Q9BXA9 1300 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 M0R2C6 588 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 AKR1B1P15121 316 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 HOXA7P31268 230 aaPredicted RBP21.34■■□□□ 1.01
PNKP-230ENST00000638016 FLT3LGP49771 235 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 PABPC4Q13310 644 aaKnown RBP eCLIP21.34■■□□□ 1.01
PNKP-230ENST00000638016 ANKRD45Q5TZF3 282 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 ZSCAN25Q6NSZ9 544 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 USP17L2Q6R6M4 530 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 NBPF11Q86T75 865 aa21.34■■□□□ 1.01
PNKP-230ENST00000638016 STRBPQ96SI9 672 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms