RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 FAM196BA6NMK8 535 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 USP17L12C9JPN9 530 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 USP17L21D6R901 530 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 PRKAB2O43741 272 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 APPP05067 770 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 LBX1P52954 281 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 CERKLQ49MI3 558 aaPredicted RBP16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 MCMDC2Q4G0Z9 681 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 TTC22Q5TAA0 569 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 CNKSR2Q8WXI2 1034 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 BRI3BPQ8WY22 251 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 ZBTB21Q9ULJ3 1066 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 SLC45A1Q9Y2W3 748 aa16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 BAZ2AQ9UIF9 1905 aaKnown RBP16.74■□□□□ 0.27
SNRPA1-216ENST00000626000 A0A0G2JLL6 359 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 GSG1L2A8MUP6 293 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 C19orf81C9J6K1 198 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 M0R2C6 588 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 PLCD1P51178 756 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 PABPC4Q13310 644 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 ABCB5Q2M3G0 1257 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 SLFNL1Q499Z3 407 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 PROCA1Q8NCQ7 364 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 NAPBQ9H115 298 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 ZFYVE28Q9HCC9 887 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 ROBO3Q96MS0 1386 aa16.73■□□□□ 0.27
SNRPA1-216ENST00000626000 IGF2BP3O00425 579 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 SDSP20132 328 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 ARHGEF6Q15052 776 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 CTR9Q6PD62 1173 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 TMEM179Q6ZVK1 233 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 C16orf86Q6ZW13 317 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 PNMA3Q9UL41 463 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 PHIPQ8WWQ0 1821 aa16.72■□□□□ 0.27
SNRPA1-216ENST00000626000 ZMYM6O95789 1325 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 PTPRFP10586 1907 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 CHGBP05060 677 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 PDE4AP27815 886 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 SHMT1P34896 483 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 NT5C2P49902 561 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 TAF1CQ15572 869 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 IFNL3Q8IZI9 196 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 TNS4Q8IZW8 715 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 PARK7Q99497 189 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 SH2D4AQ9H788 454 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
SNRPA1-216ENST00000626000 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 RAD50Q92878 1312 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 TRIM75PA6NK02 468 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 USP17L10C9JJH3 530 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 GH2P01242 217 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 USP14P54578 494 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 PDE4BQ07343 736 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 SPP2Q13103 211 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 ALX1Q15699 326 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 SH3D19Q5HYK7 790 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 PTPN18Q99952 460 aa16.7■□□□□ 0.26
SNRPA1-216ENST00000626000 LOC285556D6RIA3 1793 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 BTBD19C9JJ37 291 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 GPR25O00155 361 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 PCP11498 1178 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 CDK8P49336 464 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 BACE1P56817 501 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 NMIQ13287 307 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 COL13A1Q5TAT6 717 aaPredicted RBP16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 SEC62Q99442 399 aaKnown RBP16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 FEZ1Q99689 392 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 MKNK2Q9HBH9 465 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 AGTPBP1Q9UPW5 1226 aa16.69■□□□□ 0.26
SNRPA1-216ENST00000626000 A0A0D9SFI3 127 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 MINDY4BA8MYZ0 360 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 PDHXO00330 501 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 FKTNO75072 461 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 GDF11O95390 407 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 TBC1D8O95759 1140 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 CRHR2Q13324 411 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 RAB3GAP1Q15042 981 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 GADL1Q6ZQY3 521 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 FAM43AQ8N2R8 423 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 FAM227BQ96M60 508 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 KIAA1683Q9H0B3 1180 aa16.68■□□□□ 0.26
SNRPA1-216ENST00000626000 TLR2O60603 784 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 SLURP2P0DP57 97 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 CYP2D6P10635 497 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 RRP1BQ14684 758 aaKnown RBP16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 USP17L2Q6R6M4 530 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 ERO1AQ96HE7 468 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 KANSL2Q9H9L4 492 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 ARHGEF10LQ9HCE6 1279 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 EPB41L4AQ9HCS5 686 aaPredicted RBP16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
SNRPA1-216ENST00000626000 GSPT1P15170 499 aaKnown RBP16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 OSBPP22059 807 aa16.66■□□□□ 0.26
SNRPA1-216ENST00000626000 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms