RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 HSD3B7Q9H2F3 369 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 SLC9C2Q5TAH2 1124 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 CCDC181Q5TID7 509 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 METTL16Q86W50 562 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 SH2D3CQ8N5H7 860 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 BCCIPQ9P287 314 aaKnown RBP eCLIP11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 CRB1P82279 1406 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 DDX58O95786 925 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 SYF2O95926 243 aaKnown RBP11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 SLC39A14Q15043 492 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 POSTNQ15063 836 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 SAFBQ15424 915 aaKnown RBP eCLIP11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 MMS19Q96T76 1030 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 DBF4Q9UBU7 674 aaPredicted RBP11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 HPCAL4Q9UM19 191 aa11.03□□□□□ -0.64
TNFAIP3-210ENST00000620204 C1orf167Q5SNV9 1468 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 PTCD1O75127 700 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 MSANTD4Q8NCY6 345 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 RASSF8Q8NHQ8 419 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 PPANQ9NQ55 473 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 MAN1B1Q9UKM7 699 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 RAB21Q9UL25 225 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 TTF2Q9UNY4 1162 aaKnown RBP11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 SAR1BQ9Y6B6 198 aa11.02□□□□□ -0.64
TNFAIP3-210ENST00000620204 PRAMEF22A3QJZ6 481 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 PAX7P23759 505 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 MCM3P25205 808 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 SARNPP82979 210 aaKnown RBP11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 ODF2Q5BJF6 829 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 KRT40Q6A162 431 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 COG1Q8WTW3 980 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 IFT81Q8WYA0 676 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 CCDC85AQ96PX6 553 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 MYD88Q99836 296 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 PLCD4Q9BRC7 762 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 C2orf54Q08AI8 447 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 PPFIA1Q13136 1202 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 NAIF1Q69YI7 327 aaPredicted RBP11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 KCNV1Q6PIU1 500 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 B4GALNT4Q76KP1 1039 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 UBE3BQ7Z3V4 1068 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 TBC1D31Q96DN5 1066 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 TAB2Q9NYJ8 693 aa11.02□□□□□ -0.65
TNFAIP3-210ENST00000620204 ZNF185O15231 689 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 PPP1R12BO60237 982 aaPredicted RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 HSF2BPO75031 334 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 RPS6KA5O75582 802 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 TUBBP07437 444 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 CALRP27797 417 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 ELF1P32519 619 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 KIF23Q02241 960 aaPredicted RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 IMMTQ16891 758 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 RRP12Q5JTH9 1297 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 SLC26A6Q9BXS9 759 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 CDHR2Q9BYE9 1310 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 KIF1CO43896 1103 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 ZPR1O75312 459 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 SATB1Q01826 763 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 CNGA4Q8IV77 575 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 IDEP14735 1019 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 EZRP15311 586 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 USP5P45974 858 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 FXR1P51114 621 aaKnown RBP eCLIP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 KSR2Q6VAB6 950 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 MAATS1Q7Z4T9 603 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 PRPF38AQ8NAV1 312 aaKnown RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 TEX13AQ9BXU3 409 aaPredicted RBP11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 WWC3Q9ULE0 1092 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 USP32Q8NFA0 1604 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 IGSF1Q8N6C5 1336 aa11.01□□□□□ -0.65
TNFAIP3-210ENST00000620204 BACH1O14867 736 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 METAP2P50579 478 aaKnown RBP eCLIP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 RNASE9P60153 205 aaKnown RBP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 MICALCLQ6ZW33 695 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 E7EVH7 732 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 HSPD1P10809 573 aaKnown RBP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 SF3B2Q13435 895 aaKnown RBP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 CCDC121Q6ZUS5 278 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 KRI1Q8N9T8 703 aaKnown RBP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 MLKLQ8NB16 471 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 JAKMIP2Q96AA8 810 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 WDR3Q9UNX4 943 aaKnown RBP eCLIP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 LMTK3Q96Q04 1460 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 CHUKO15111 745 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 OPA1O60313 960 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 IFIT1P09914 478 aaKnown RBP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 BMP6P22004 513 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 CXCR5P32302 372 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 GCKP35557 465 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 IARSP41252 1262 aaKnown RBP11□□□□□ -0.65
TNFAIP3-210ENST00000620204 SEC24CP53992 1094 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 PPARAQ07869 468 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 TNNI3KQ59H18 835 aa11□□□□□ -0.65
TNFAIP3-210ENST00000620204 IQCA1Q86XH1 822 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms