RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ISM2Q6H9L7 571 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 ZSCAN29Q8IWY8 852 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 ZFPM1Q8IX07 1006 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 AMOTL1Q8IY63 956 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 TRIM22Q8IYM9 498 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 STAG2Q8N3U4 1231 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 FBXL16Q8N461 479 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 CRACR2BQ8N4Y2 399 aaPredicted RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 TMEM87AQ8NBN3 555 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 TSPY26PQ9H489 355 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 DDX4Q9NQI0 724 aaKnown RBP3.99□□□□□ -1.77
LIG4-205ENST00000614526 IL17RBQ9NRM6 502 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 MRVI1Q9Y6F6 885 aa3.99□□□□□ -1.77
LIG4-205ENST00000614526 RAD17O75943 681 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 SHROOM1Q2M3G4 852 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 MYSM1Q5VVJ2 828 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 DIS3L2Q8IYB7 885 aaKnown RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 FSIP1Q8NA03 581 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 ZNF396Q96N95 335 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 CLIC6Q96NY7 704 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 COA1Q9GZY4 146 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 NUP62CLQ9H1M0 184 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 TNMDQ9H2S6 317 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 GOLPH3LQ9H4A5 285 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 ZNF277Q9NRM2 450 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 ARPP21Q9UBL0 812 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 ANAPC4Q9UJX5 808 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 PCDHA7Q9UN72 937 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 FLT1P17948 1338 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 CACNA1SQ13698 1873 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 ZNF831Q5JPB2 1677 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 GPR75-ASB3A0A0A6YYF3 556 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 MPHOSPH10O00566 681 aaKnown RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 PPIP5K2O43314 1243 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 ECE2O60344 883 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 IFNAR1P17181 557 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 CDK8P49336 464 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 RHBDL3P58872 404 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 TROAPQ12815 778 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 HOMER1Q86YM7 354 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 TMTC2Q8N394 836 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 SRBD1Q8N5C6 995 aaKnown RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 CTCFLQ8NI51 663 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 ANP32BQ92688 251 aaKnown RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 GPKOWQ92917 476 aaPredicted RBP eCLIP3.98□□□□□ -1.77
LIG4-205ENST00000614526 KAT14Q9H8E8 782 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 CABP5Q9NP86 173 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 MKRN1Q9UHC7 482 aaKnown RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.98□□□□□ -1.77
LIG4-205ENST00000614526 ZBTB12Q9Y330 459 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 WDR19Q8NEZ3 1342 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 COL24A1Q17RW2 1714 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 PSDA5PKW4 1024 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 ADAMTS3O15072 1205 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 FMNL1O95466 1100 aaPredicted RBP3.98□□□□□ -1.77
LIG4-205ENST00000614526 DPEP1P16444 411 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 RCSD1Q6JBY9 416 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 USP17L2Q6R6M4 530 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 PNMA1Q8ND90 353 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 TBC1D22AQ8WUA7 517 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 SHISA4Q96DD7 197 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 EYA3Q99504 573 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 UBA5Q9GZZ9 404 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 RCOR1Q9UKL0 485 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 MYH2Q9UKX2 1941 aa3.98□□□□□ -1.77
LIG4-205ENST00000614526 CCDC196A0A1B0GTZ2 297 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 BIN1O00499 593 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 SPTLC2O15270 562 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 WDHD1O75717 1129 aaPredicted RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 RASA1P20936 1047 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 PPP4CP60510 307 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 SAFBQ15424 915 aaKnown RBP eCLIP3.97□□□□□ -1.77
LIG4-205ENST00000614526 EARS2Q5JPH6 523 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 ANO1Q5XXA6 986 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 CDC42EP5Q6NZY7 148 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 C15orf52Q6ZUT6 534 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 LRRC47Q8N1G4 583 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 LINC00301Q8NCQ3 95 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 RASGRP4Q8TDF6 673 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 SDF4Q9BRK5 362 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.97□□□□□ -1.77
LIG4-205ENST00000614526 TDRD3Q9H7E2 651 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 USP25Q9UHP3 1055 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 FRMPD2Q68DX3 1309 aaPredicted RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 CASZ1Q86V15 1759 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 CLRN2A0PK11 232 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 CRKP46108 304 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 NDUFA8P51970 172 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 GRIN1Q05586 938 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 R3HDM1Q15032 1099 aaKnown RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 PKN1Q16512 942 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 MAP3K11Q16584 847 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 SBK1Q52WX2 424 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 SAMD1Q6SPF0 538 aaPredicted RBP3.97□□□□□ -1.77
LIG4-205ENST00000614526 CCDC73Q6ZRK6 1079 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 PDILTQ8N807 584 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 ARAP2Q8WZ64 1704 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 CNKSR1Q969H4 720 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 TEKT1Q969V4 418 aa3.97□□□□□ -1.77
LIG4-205ENST00000614526 TRIM44Q96DX7 344 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms