RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 USP17L21D6R901 530 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 SDSP20132 328 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 SBK1Q52WX2 424 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 C12orf60Q5U649 245 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 FASTKD5Q7L8L6 764 aaKnown RBP14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 MS4A4AQ96JQ5 239 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 SEC62Q99442 399 aaKnown RBP14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 NAPBQ9H115 298 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 ZBTB21Q9ULJ3 1066 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 ROBO3Q96MS0 1386 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 MYH4Q9Y623 1939 aa14.41□□□□□ -0.1
ARHGEF1-216ENST00000598587 GDF11O95390 407 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 SLC3A2P08195 630 aaKnown RBP14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 HSPA8P11142 646 aaKnown RBP14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 GABPAQ06546 454 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 ABCB5Q2M3G0 1257 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 CTR9Q6PD62 1173 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 ZNF280CQ8ND82 737 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 CFHR5Q9BXR6 569 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 PRDM10Q9NQV6 1147 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 AFG3L2Q9Y4W6 797 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 CASP8AP2Q9UKL3 1982 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 CCDC171Q6TFL3 1326 aa14.4□□□□□ -0.1
ARHGEF1-216ENST00000598587 GREB1LQ9C091 1923 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 A0A0D9SFI3 127 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 A0A0G2JLL6 359 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 TRIM75PA6NK02 468 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 IGF2BP3O00425 579 aaKnown RBP eCLIP14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 SLURP2P0DP57 97 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 SHMT1P34896 483 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 LBX1P52954 281 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 NMIQ13287 307 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 C16orf86Q6ZW13 317 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 PRRT2Q7Z6L0 340 aaPredicted RBP14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 IFNL3Q8IZI9 196 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 BRI3BPQ8WY22 251 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 CCDC17Q96LX7 622 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 FAM227BQ96M60 508 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 ZMYM6O95789 1325 aa14.39□□□□□ -0.11
ARHGEF1-216ENST00000598587 MINDY4BA8MYZ0 360 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 GH2P01242 217 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 CYP2D6P10635 497 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 GSPT1P15170 499 aaKnown RBP14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 RAB3GAP1Q15042 981 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 TAF1CQ15572 869 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 GADL1Q6ZQY3 521 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 ANKRD23Q86SG2 305 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 PROCA1Q8NCQ7 364 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 WDR18Q9BV38 432 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 EPB41L4AQ9HCS5 686 aaPredicted RBP14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 TSKSQ9UJT2 592 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 RAD50Q92878 1312 aa14.38□□□□□ -0.11
ARHGEF1-216ENST00000598587 CYP2D7A0A087X1C5 515 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 CDK8P49336 464 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 PDE4BQ07343 736 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 PABPC4Q13310 644 aaKnown RBP eCLIP14.37□□□□□ -0.116e-8■■■□□ 19
ARHGEF1-216ENST00000598587 NOM1Q5C9Z4 860 aaKnown RBP14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 CWC27Q6UX04 472 aaKnown RBP14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 CCDC129Q6ZRS4 1044 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 TMEM179Q6ZVK1 233 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 FEZ1Q99689 392 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 MKNK2Q9HBH9 465 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 ZFYVE28Q9HCC9 887 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 TMOD4Q9NZQ9 345 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 SLC45A1Q9Y2W3 748 aa14.37□□□□□ -0.11
ARHGEF1-216ENST00000598587 C19orf81C9J6K1 198 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 BTBD19C9JJ37 291 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 USP17L10C9JJH3 530 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 TBC1D8O95759 1140 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 USP14P54578 494 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 SPP2Q13103 211 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 RRP1BQ14684 758 aaKnown RBP14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 DYNLL2Q96FJ2 89 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 PARK7Q99497 189 aaKnown RBP14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 PTPN18Q99952 460 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 SH2D4AQ9H788 454 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 PNMA3Q9UL41 463 aa14.36□□□□□ -0.11
ARHGEF1-216ENST00000598587 MGAMO43451 1857 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 PDHXO00330 501 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 HMGCS2P54868 508 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 BACE1P56817 501 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 PPARAQ07869 468 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 CRHR2Q13324 411 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 MTMR2Q13614 643 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 ALX1Q15699 326 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 CCDC84Q86UT8 332 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 FAM43AQ8N2R8 423 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 SLC44A5Q8NCS7 719 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 ARHGEF10LQ9HCE6 1279 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
ARHGEF1-216ENST00000598587 HSPD1P10809 573 aaKnown RBP14.34□□□□□ -0.11
ARHGEF1-216ENST00000598587 SH3D19Q5HYK7 790 aa14.34□□□□□ -0.11
ARHGEF1-216ENST00000598587 ZNF589Q86UQ0 364 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF1-216ENST00000598587 ZNF444Q8N0Y2 327 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF1-216ENST00000598587 GPR25O00155 361 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms