RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 WDR18Q9BV38 432 aa26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 EFCC1Q9HA90 598 aa26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 ZBTB21Q9ULJ3 1066 aa26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 SLC45A1Q9Y2W3 748 aa26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 SUPT16HQ9Y5B9 1047 aaKnown RBP26.95■■□□□ 1.9
GTF2F1-204ENST00000594965 GABPAQ06546 454 aa26.94■■□□□ 1.9
GTF2F1-204ENST00000594965 TREML2Q5T2D2 321 aa26.94■■□□□ 1.9
GTF2F1-204ENST00000594965 ANKRD45Q5TZF3 282 aa26.94■■□□□ 1.9
GTF2F1-204ENST00000594965 PARK7Q99497 189 aaKnown RBP26.94■■□□□ 1.9
GTF2F1-204ENST00000594965 ARHGAP39Q9C0H5 1083 aa26.94■■□□□ 1.9
GTF2F1-204ENST00000594965 GINM1Q9NU53 330 aa26.94■■□□□ 1.9
GTF2F1-204ENST00000594965 MCM9Q9NXL9 1143 aa26.94■■□□□ 1.9
GTF2F1-204ENST00000594965 POLR3DP05423 398 aaPredicted RBP26.93■■□□□ 1.9
GTF2F1-204ENST00000594965 SHMT1P34896 483 aa26.93■■□□□ 1.9
GTF2F1-204ENST00000594965 SH3D19Q5HYK7 790 aa26.93■■□□□ 1.9
GTF2F1-204ENST00000594965 AS3MTQ9HBK9 375 aa26.93■■□□□ 1.9
GTF2F1-204ENST00000594965 AGTPBP1Q9UPW5 1226 aa26.93■■□□□ 1.9
GTF2F1-204ENST00000594965 PTPN22Q9Y2R2 807 aa26.93■■□□□ 1.9
GTF2F1-204ENST00000594965 CYP2D6P10635 497 aa26.92■■□□□ 1.9
GTF2F1-204ENST00000594965 BCRP11274 1271 aa26.92■■□□□ 1.9
GTF2F1-204ENST00000594965 MX1P20591 662 aa26.92■■□□□ 1.9
GTF2F1-204ENST00000594965 CTGFP29279 349 aa26.92■■□□□ 1.9
GTF2F1-204ENST00000594965 HMGCS2P54868 508 aa26.92■■□□□ 1.9
GTF2F1-204ENST00000594965 LACTBP83111 547 aaPredicted RBP26.92■■□□□ 1.9
GTF2F1-204ENST00000594965 PROCA1Q8NCQ7 364 aaPredicted RBP26.92■■□□□ 1.9
GTF2F1-204ENST00000594965 ATP8A2Q9NTI2 1148 aa26.91■■□□□ 1.9
GTF2F1-204ENST00000594965 ERC2O15083 957 aa26.9■■□□□ 1.9
GTF2F1-204ENST00000594965 GLRX3O76003 335 aaKnown RBP26.9■■□□□ 1.9
GTF2F1-204ENST00000594965 GH2P01242 217 aa26.9■■□□□ 1.9
GTF2F1-204ENST00000594965 RNF113AO15541 343 aaKnown RBP26.89■■□□□ 1.9
GTF2F1-204ENST00000594965 BACE1P56817 501 aa26.89■■□□□ 1.9
GTF2F1-204ENST00000594965 MTMR2Q13614 643 aa26.89■■□□□ 1.9
GTF2F1-204ENST00000594965 CERKLQ49MI3 558 aaPredicted RBP26.89■■□□□ 1.9
GTF2F1-204ENST00000594965 SMC5Q8IY18 1101 aa26.89■■□□□ 1.9
GTF2F1-204ENST00000594965 OSBP2Q969R2 916 aa26.89■■□□□ 1.9
GTF2F1-204ENST00000594965 SLC4A4Q9Y6R1 1079 aa26.89■■□□□ 1.9
GTF2F1-204ENST00000594965 SMIM22K7EJ46 135 aa26.88■■□□□ 1.89
GTF2F1-204ENST00000594965 IGHDP01880 384 aa26.88■■□□□ 1.89
GTF2F1-204ENST00000594965 RGS19P49795 217 aa26.88■■□□□ 1.89
GTF2F1-204ENST00000594965 APPBP2Q92624 585 aa26.88■■□□□ 1.89
GTF2F1-204ENST00000594965 STRBPQ96SI9 672 aaKnown RBP26.88■■□□□ 1.89
GTF2F1-204ENST00000594965 GUCY1A2P33402 732 aa26.87■■□□□ 1.89
GTF2F1-204ENST00000594965 DYNLL2Q96FJ2 89 aa26.87■■□□□ 1.89
GTF2F1-204ENST00000594965 STAP2Q9UGK3 403 aa26.87■■□□□ 1.89
GTF2F1-204ENST00000594965 CYP2D7A0A087X1C5 515 aa26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 USP17L10C9JJH3 530 aa26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 ECM2O94769 699 aaPredicted RBP26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 KIF22Q14807 665 aa26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 ARHGEF6Q15052 776 aa26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 ABCB5Q2M3G0 1257 aa26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 SLC44A5Q8NCS7 719 aa26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 RWDD1Q9H446 243 aaPredicted RBP26.86■■□□□ 1.89
GTF2F1-204ENST00000594965 C19orf81C9J6K1 198 aa26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 USP17L12C9JPN9 530 aa26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 USP17L21D6R901 530 aa26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 ZFYP08048 801 aaPredicted RBP26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 SOX10P56693 466 aa26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 C12orf60Q5U649 245 aa26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 ZBTB47Q9UFB7 747 aaPredicted RBP26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 DOCK3Q8IZD9 2030 aa26.85■■□□□ 1.89
GTF2F1-204ENST00000594965 M0R2C6 588 aa26.84■■□□□ 1.89
GTF2F1-204ENST00000594965 PSMC4P43686 418 aa26.84■■□□□ 1.89
GTF2F1-204ENST00000594965 PDE1AP54750 535 aa26.84■■□□□ 1.89
GTF2F1-204ENST00000594965 TRIM47Q96LD4 638 aa26.84■■□□□ 1.89
GTF2F1-204ENST00000594965 EMILIN3Q9NT22 766 aa26.84■■□□□ 1.89
GTF2F1-204ENST00000594965 PNMA3Q9UL41 463 aa26.84■■□□□ 1.89
GTF2F1-204ENST00000594965 PTCH2Q9Y6C5 1203 aa26.84■■□□□ 1.89
GTF2F1-204ENST00000594965 HTTP42858 3142 aa26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 GSG1L2A8MUP6 293 aa26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 RAB3GAP1Q15042 981 aa26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 CTR9Q6PD62 1173 aa26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 SMCR8Q8TEV9 937 aaPredicted RBP26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 LNPKQ9C0E8 428 aa26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 ASCC2Q9H1I8 757 aaPredicted RBP26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 TMOD4Q9NZQ9 345 aa26.83■■□□□ 1.89
GTF2F1-204ENST00000594965 RBBP6Q7Z6E9 1792 aaKnown RBP26.82■■□□□ 1.88
GTF2F1-204ENST00000594965 GNRH1P01148 92 aa26.82■■□□□ 1.88
GTF2F1-204ENST00000594965 B4GALNT3Q6L9W6 998 aa26.82■■□□□ 1.88
GTF2F1-204ENST00000594965 SEC62Q99442 399 aaKnown RBP26.82■■□□□ 1.88
GTF2F1-204ENST00000594965 FSD1Q9BTV5 496 aa26.82■■□□□ 1.88
GTF2F1-204ENST00000594965 CABP5Q9NP86 173 aa26.82■■□□□ 1.88
GTF2F1-204ENST00000594965 SWAP70Q9UH65 585 aa26.82■■□□□ 1.88
GTF2F1-204ENST00000594965 GPAA1O43292 621 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 OSBPP22059 807 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 HOXA7P31268 230 aaPredicted RBP26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 PABPC4Q13310 644 aaKnown RBP eCLIP26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 SEPT2Q15019 361 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 USP17L2Q6R6M4 530 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 ANKRD13CQ8N6S4 541 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 ACER1Q8TDN7 264 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 ARMC5Q96C12 935 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 TAOK2Q9UL54 1235 aa26.81■■□□□ 1.88
GTF2F1-204ENST00000594965 CDK8P49336 464 aa26.8■■□□□ 1.88
GTF2F1-204ENST00000594965 ZMYM1Q5SVZ6 1142 aa26.8■■□□□ 1.88
GTF2F1-204ENST00000594965 C12orf42Q96LP6 360 aa26.8■■□□□ 1.88
GTF2F1-204ENST00000594965 GREB1LQ9C091 1923 aaPredicted RBP26.8■■□□□ 1.88
GTF2F1-204ENST00000594965 FMNL1O95466 1100 aaPredicted RBP26.79■■□□□ 1.88
GTF2F1-204ENST00000594965 LRRFIP1Q32MZ4 808 aaKnown RBP26.79■■□□□ 1.88
GTF2F1-204ENST00000594965 C16orf86Q6ZW13 317 aa26.79■■□□□ 1.88
GTF2F1-204ENST00000594965 DDRGK1Q96HY6 314 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms